RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 DSCR10P59022 87 aa2.49□□□□□ -2.01
HMGN1P28-201ENST00000521340 KRTAP10-12P60413 245 aa2.49□□□□□ -2.01
HMGN1P28-201ENST00000521340 SSX2Q16385 188 aa2.49□□□□□ -2.01
HMGN1P28-201ENST00000521340 MICBQ29980 383 aa2.49□□□□□ -2.01
HMGN1P28-201ENST00000521340 HIGD2BQ4VC39 106 aa2.49□□□□□ -2.01
HMGN1P28-201ENST00000521340 PRR30Q53SZ7 412 aaPredicted RBP2.49□□□□□ -2.01
HMGN1P28-201ENST00000521340 C9orf129Q5T035 196 aaKnown RBP2.49□□□□□ -2.01
HMGN1P28-201ENST00000521340 PRAMEF20Q5VT98 475 aa2.49□□□□□ -2.01
HMGN1P28-201ENST00000521340 C11orf71Q6IPW1 123 aa2.49□□□□□ -2.01
HMGN1P28-201ENST00000521340 KRTAP5-4Q6L8H1 288 aa2.49□□□□□ -2.01
HMGN1P28-201ENST00000521340 FBXL22Q6P050 247 aa2.49□□□□□ -2.01
HMGN1P28-201ENST00000521340 C1orf94Q6P1W5 598 aa2.49□□□□□ -2.01
HMGN1P28-201ENST00000521340 TMEM220Q6QAJ8 160 aa2.49□□□□□ -2.01
HMGN1P28-201ENST00000521340 WDR74Q6RFH5 385 aaPredicted RBP2.49□□□□□ -2.01
HMGN1P28-201ENST00000521340 Q6ZR54 194 aa2.49□□□□□ -2.01
HMGN1P28-201ENST00000521340 CENPQQ7L2Z9 268 aaPredicted RBP2.49□□□□□ -2.01
HMGN1P28-201ENST00000521340 RDH10Q8IZV5 341 aa2.49□□□□□ -2.01
HMGN1P28-201ENST00000521340 OR4K14Q8NGD5 310 aa2.49□□□□□ -2.01
HMGN1P28-201ENST00000521340 KCNG3Q8TAE7 436 aa2.49□□□□□ -2.01
HMGN1P28-201ENST00000521340 ACMSDQ8TDX5 336 aa2.49□□□□□ -2.01
HMGN1P28-201ENST00000521340 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.49□□□□□ -2.01
HMGN1P28-201ENST00000521340 NUS1Q96E22 293 aa2.49□□□□□ -2.01
HMGN1P28-201ENST00000521340 PAGE5Q96GU1 130 aa2.49□□□□□ -2.01
HMGN1P28-201ENST00000521340 MS4A14Q96JA4 679 aa2.49□□□□□ -2.01
HMGN1P28-201ENST00000521340 MRPL45Q9BRJ2 306 aaKnown RBP2.49□□□□□ -2.01
HMGN1P28-201ENST00000521340 KRTAP4-4Q9BYR3 166 aa2.49□□□□□ -2.01
HMGN1P28-201ENST00000521340 PPA2Q9H2U2 334 aa2.49□□□□□ -2.01
HMGN1P28-201ENST00000521340 LY9Q9HBG7 655 aa2.49□□□□□ -2.01
HMGN1P28-201ENST00000521340 HOXC10Q9NYD6 342 aa2.49□□□□□ -2.01
HMGN1P28-201ENST00000521340 UBQLN1Q9UMX0 589 aaKnown RBP2.49□□□□□ -2.01
HMGN1P28-201ENST00000521340 ABCG2Q9UNQ0 655 aa2.49□□□□□ -2.01
HMGN1P28-201ENST00000521340 ATP7BP35670 1465 aa2.49□□□□□ -2.01
HMGN1P28-201ENST00000521340 CDK12Q9NYV4 1490 aaPredicted RBP2.49□□□□□ -2.01
HMGN1P28-201ENST00000521340 ZFYVE9O95405 1425 aa2.49□□□□□ -2.01
HMGN1P28-201ENST00000521340 ARHGAP31Q2M1Z3 1444 aa2.49□□□□□ -2.01
HMGN1P28-201ENST00000521340 CD109Q6YHK3 1445 aa2.49□□□□□ -2.01
HMGN1P28-201ENST00000521340 YEATS2Q9ULM3 1422 aa2.49□□□□□ -2.01
HMGN1P28-201ENST00000521340 PHRF1Q9P1Y6 1649 aaKnown RBP2.49□□□□□ -2.01
HMGN1P28-201ENST00000521340 ABCC11Q96J66 1382 aa2.49□□□□□ -2.01
HMGN1P28-201ENST00000521340 RAI1Q7Z5J4 1906 aaPredicted RBP2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 DDX60Q8IY21 1712 aaKnown RBP2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 AGLP35573 1532 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 TTC21BQ7Z4L5 1316 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 SH3TC1Q8TE82 1336 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 PIK3C2AO00443 1686 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 LMO7Q8WWI1 1683 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 AFDNP55196 1824 aaKnown RBP2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 LAMA4Q16363 1823 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 ECM29Q5VYK3 1845 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 IGHV1OR21-1A0A087WYE8 117 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 IGHV7-81A0A0B4J1V7 117 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 A0A0G2JLM5 398 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 SERTM2A0A1B0GWG4 89 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 HEATR9A2RTY3 570 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 DLGAP1O14490 977 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 PHOX2AO14813 284 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 SERF1AO75920 110 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 TSPAN13O95857 204 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 IGHV2-5P01817 119 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 P04436 131 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 ASGR1P07306 291 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 FGF4P08620 206 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 OR8U8P0C7N1 319 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 GZMAP12544 262 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 GALP22466 123 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 CALCRP30988 508 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 EPHX2P34913 555 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 KPNA2P52292 529 aaKnown RBP2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 RPS8P62241 208 aaKnown RBP2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 CHRNB3Q05901 458 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 CCDC173Q0VFZ6 552 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 PLD1Q13393 1074 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 OR5I1Q13606 314 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 CHRNA6Q15825 494 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 GSG1Q2KHT4 349 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 ALKBH6Q3KRA9 238 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 XKR7Q5GH72 579 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 VAX1Q5SQQ9 334 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 OLFML2AQ68BL7 652 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 OR52E8Q6IFG1 317 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 RNASEKQ6P5S7 137 aaKnown RBP2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 SASS6Q6UVJ0 657 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 IL34Q6ZMJ4 242 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 RFLNAQ6ZTI6 216 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 STXBP4Q6ZWJ1 553 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 FAM220AQ7Z4H9 259 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 NANOGNBQ7Z5D8 188 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 PAQR7Q86WK9 346 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 CDC20BQ86Y33 519 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 APOBEC3FQ8IUX4 373 aaKnown RBP2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 ZNF525Q8N782 197 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 NKAPP1Q8N9T2 125 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 BRSK1Q8TDC3 778 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 C7orf33Q8WU49 177 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 ELMO1Q92556 727 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 FGF14Q92915 247 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 LRRC58Q96CX6 371 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 SLITRK2Q9H156 845 aa2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 NHEJ1Q9H9Q4 299 aaPredicted RBP2.48□□□□□ -2.01
HMGN1P28-201ENST00000521340 FOLH1BQ9HBA9 442 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms