RNA–Protein interactions for RNA: ENST00000516328.1

RNU6-1338P-201, Transcript of RNA, U6 small nuclear 1338, pseudogene, humanhuman

BASIC

Gene RNU6-1338P, Length 91 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1338P-201ENST00000516328 PRMT9Q6P2P2 845 aa0.22□□□□□ -2.37
RNU6-1338P-201ENST00000516328 TMEM136Q6ZRR5 245 aa0.22□□□□□ -2.37
RNU6-1338P-201ENST00000516328 ZSCAN30Q86W11 494 aa0.22□□□□□ -2.37
RNU6-1338P-201ENST00000516328 TMEM17Q86X19 198 aa0.22□□□□□ -2.37
RNU6-1338P-201ENST00000516328 IQCA1Q86XH1 822 aa0.22□□□□□ -2.37
RNU6-1338P-201ENST00000516328 VSTM4Q8IW00 320 aa0.22□□□□□ -2.37
RNU6-1338P-201ENST00000516328 TMEM105Q8N8V8 129 aa0.22□□□□□ -2.37
RNU6-1338P-201ENST00000516328 OR5AU1Q8NGC0 362 aa0.22□□□□□ -2.37
RNU6-1338P-201ENST00000516328 OR9A2Q8NGT5 310 aa0.22□□□□□ -2.37
RNU6-1338P-201ENST00000516328 OR13G1Q8NGZ3 307 aa0.22□□□□□ -2.37
RNU6-1338P-201ENST00000516328 PSMA8Q8TAA3 256 aa0.22□□□□□ -2.37
RNU6-1338P-201ENST00000516328 FAM110BQ8TC76 370 aa0.22□□□□□ -2.37
RNU6-1338P-201ENST00000516328 EEF2KMTQ96G04 330 aa0.22□□□□□ -2.37
RNU6-1338P-201ENST00000516328 AMDHD1Q96NU7 426 aa0.22□□□□□ -2.37
RNU6-1338P-201ENST00000516328 SLC6A7Q99884 636 aa0.22□□□□□ -2.37
RNU6-1338P-201ENST00000516328 SLC35A5Q9BS91 424 aa0.22□□□□□ -2.37
RNU6-1338P-201ENST00000516328 MMADHCQ9H3L0 296 aaPredicted RBP0.22□□□□□ -2.37
RNU6-1338P-201ENST00000516328 RANBP3Q9H6Z4 567 aaPredicted RBP0.22□□□□□ -2.37
RNU6-1338P-201ENST00000516328 SYNDIG1Q9H7V2 258 aa0.22□□□□□ -2.37
RNU6-1338P-201ENST00000516328 COMMD8Q9NX08 183 aa0.22□□□□□ -2.37
RNU6-1338P-201ENST00000516328 KCNIP1Q9NZI2 227 aa0.22□□□□□ -2.37
RNU6-1338P-201ENST00000516328 DHX29Q7Z478 1369 aaKnown RBP0.21□□□□□ -2.38
RNU6-1338P-201ENST00000516328 IGHV3-74A0A0B4J1X5 117 aa0.21□□□□□ -2.38
RNU6-1338P-201ENST00000516328 TRBV2A0A0J9YWF9 115 aa0.21□□□□□ -2.38
RNU6-1338P-201ENST00000516328 CIB4A0PJX0 185 aa0.21□□□□□ -2.38
RNU6-1338P-201ENST00000516328 POLR1CO15160 346 aaPredicted RBP0.21□□□□□ -2.38
RNU6-1338P-201ENST00000516328 TAPBPO15533 448 aa0.21□□□□□ -2.38
RNU6-1338P-201ENST00000516328 B3GAT3O94766 335 aa0.21□□□□□ -2.38
RNU6-1338P-201ENST00000516328 KLHL2O95198 593 aa0.21□□□□□ -2.38
RNU6-1338P-201ENST00000516328 HLA-DQA1P01909 254 aa0.21□□□□□ -2.38
RNU6-1338P-201ENST00000516328 CXCL10P02778 98 aa0.21□□□□□ -2.38
RNU6-1338P-201ENST00000516328 BCHEP06276 602 aa0.21□□□□□ -2.38
RNU6-1338P-201ENST00000516328 HSP90AB1P08238 724 aaKnown RBP0.21□□□□□ -2.38
RNU6-1338P-201ENST00000516328 NPR2P20594 1047 aa0.21□□□□□ -2.38
RNU6-1338P-201ENST00000516328 BDNFP23560 247 aa0.21□□□□□ -2.38
RNU6-1338P-201ENST00000516328 FUSP35637 526 aaKnown RBP eCLIP0.21□□□□□ -2.38
RNU6-1338P-201ENST00000516328 CSNK1A1P48729 337 aa0.21□□□□□ -2.38
RNU6-1338P-201ENST00000516328 NCBP2P52298 156 aaKnown RBP eCLIP0.21□□□□□ -2.38
RNU6-1338P-201ENST00000516328 RPS14P62263 151 aaKnown RBP0.21□□□□□ -2.38
RNU6-1338P-201ENST00000516328 SCARB2Q14108 478 aa0.21□□□□□ -2.38
RNU6-1338P-201ENST00000516328 GINS1Q14691 196 aa0.21□□□□□ -2.38
RNU6-1338P-201ENST00000516328 MICBQ29980 383 aa0.21□□□□□ -2.38
RNU6-1338P-201ENST00000516328 DEFB134Q4QY38 66 aa0.21□□□□□ -2.38
RNU6-1338P-201ENST00000516328 PCOTHQ58A44 107 aa0.21□□□□□ -2.38
RNU6-1338P-201ENST00000516328 TTC19Q6DKK2 380 aaPredicted RBP0.21□□□□□ -2.38
RNU6-1338P-201ENST00000516328 AFTPHQ6ULP2 937 aa0.21□□□□□ -2.38
RNU6-1338P-201ENST00000516328 USP50Q70EL3 339 aaPredicted RBP0.21□□□□□ -2.38
RNU6-1338P-201ENST00000516328 STRADAQ7RTN6 431 aa0.21□□□□□ -2.38
RNU6-1338P-201ENST00000516328 STPG2Q8N412 459 aa0.21□□□□□ -2.38
RNU6-1338P-201ENST00000516328 ATP6V0D2Q8N8Y2 350 aa0.21□□□□□ -2.38
RNU6-1338P-201ENST00000516328 IPMKQ8NFU5 416 aa0.21□□□□□ -2.38
RNU6-1338P-201ENST00000516328 OR5L2Q8NGL0 311 aa0.21□□□□□ -2.38
RNU6-1338P-201ENST00000516328 GDAP1Q8TB36 358 aa0.21□□□□□ -2.38
RNU6-1338P-201ENST00000516328 NANPQ8TBE9 248 aa0.21□□□□□ -2.38
RNU6-1338P-201ENST00000516328 HTR3CQ8WXA8 447 aa0.21□□□□□ -2.38
RNU6-1338P-201ENST00000516328 ZMAT2Q96NC0 199 aaKnown RBP0.21□□□□□ -2.38
RNU6-1338P-201ENST00000516328 TSSK3Q96PN8 268 aa0.21□□□□□ -2.38
RNU6-1338P-201ENST00000516328 PKMYT1Q99640 499 aa0.21□□□□□ -2.38
RNU6-1338P-201ENST00000516328 WDR76Q9H967 626 aa0.21□□□□□ -2.38
RNU6-1338P-201ENST00000516328 ZCCHC17Q9NP64 241 aaKnown RBP0.21□□□□□ -2.38
RNU6-1338P-201ENST00000516328 PRMT8Q9NR22 394 aaPredicted RBP0.21□□□□□ -2.38
RNU6-1338P-201ENST00000516328 RDH8Q9NYR8 311 aa0.21□□□□□ -2.38
RNU6-1338P-201ENST00000516328 AIPL1Q9NZN9 384 aa0.21□□□□□ -2.38
RNU6-1338P-201ENST00000516328 XCL2Q9UBD3 114 aa0.21□□□□□ -2.38
RNU6-1338P-201ENST00000516328 TRIM10Q9UDY6 481 aa0.21□□□□□ -2.38
RNU6-1338P-201ENST00000516328 IL20RAQ9UHF4 553 aa0.21□□□□□ -2.38
RNU6-1338P-201ENST00000516328 CUX2O14529 1486 aa0.21□□□□□ -2.38
RNU6-1338P-201ENST00000516328 ADAMTS13Q76LX8 1427 aa0.21□□□□□ -2.38
RNU6-1338P-201ENST00000516328 MDN1Q9NU22 5596 aa0.2□□□□□ -2.38
RNU6-1338P-201ENST00000516328 A8MUI8 341 aa0.2□□□□□ -2.38
RNU6-1338P-201ENST00000516328 TRDCB7Z8K6 153 aa0.2□□□□□ -2.38
RNU6-1338P-201ENST00000516328 DDX39AO00148 427 aaKnown RBP0.2□□□□□ -2.38
RNU6-1338P-201ENST00000516328 MRPS12O15235 138 aaKnown RBP0.2□□□□□ -2.38
RNU6-1338P-201ENST00000516328 CXCL13O43927 109 aa0.2□□□□□ -2.38
RNU6-1338P-201ENST00000516328 UGT1A9O60656 530 aa0.2□□□□□ -2.38
RNU6-1338P-201ENST00000516328 CA1P00915 261 aaPredicted RBP0.2□□□□□ -2.38
RNU6-1338P-201ENST00000516328 ABHD2P08910 425 aa0.2□□□□□ -2.38
RNU6-1338P-201ENST00000516328 GNAO1P09471 354 aa0.2□□□□□ -2.38
RNU6-1338P-201ENST00000516328 TCP1P17987 556 aaKnown RBP0.2□□□□□ -2.38
RNU6-1338P-201ENST00000516328 POLR2EP19388 210 aaKnown RBP0.2□□□□□ -2.38
RNU6-1338P-201ENST00000516328 COPB2P35606 906 aa0.2□□□□□ -2.38
RNU6-1338P-201ENST00000516328 PTGFRP43088 359 aa0.2□□□□□ -2.38
RNU6-1338P-201ENST00000516328 CDH4P55283 916 aa0.2□□□□□ -2.38
RNU6-1338P-201ENST00000516328 ACVR1Q04771 509 aa0.2□□□□□ -2.38
RNU6-1338P-201ENST00000516328 GFPT1Q06210 699 aaPredicted RBP0.2□□□□□ -2.38
RNU6-1338P-201ENST00000516328 FUT5Q11128 374 aa0.2□□□□□ -2.38
RNU6-1338P-201ENST00000516328 MAPK6Q16659 721 aa0.2□□□□□ -2.38
RNU6-1338P-201ENST00000516328 SMUG1Q53HV7 270 aa0.2□□□□□ -2.38
RNU6-1338P-201ENST00000516328 AP1ARQ63HQ0 302 aa0.2□□□□□ -2.38
RNU6-1338P-201ENST00000516328 Q6ZSA8 131 aa0.2□□□□□ -2.38
RNU6-1338P-201ENST00000516328 FBXL13Q8NEE6 735 aa0.2□□□□□ -2.38
RNU6-1338P-201ENST00000516328 LILRB4Q8NHJ6 448 aa0.2□□□□□ -2.38
RNU6-1338P-201ENST00000516328 COQ8AQ8NI60 647 aa0.2□□□□□ -2.38
RNU6-1338P-201ENST00000516328 ACTR6Q9GZN1 396 aa0.2□□□□□ -2.38
RNU6-1338P-201ENST00000516328 GRPEL1Q9HAV7 217 aa0.2□□□□□ -2.38
RNU6-1338P-201ENST00000516328 NEK6Q9HC98 313 aa0.2□□□□□ -2.38
RNU6-1338P-201ENST00000516328 ISYNA1Q9NPH2 558 aa0.2□□□□□ -2.38
RNU6-1338P-201ENST00000516328 UVRAGQ9P2Y5 699 aa0.2□□□□□ -2.38
RNU6-1338P-201ENST00000516328 SEC14L3Q9UDX4 400 aa0.2□□□□□ -2.38
RNU6-1338P-201ENST00000516328 FRMPD4Q14CM0 1322 aa0.19□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms