RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 RADILQ96JH8 1075 aa11.23□□□□□ -0.61
CLCN3-210ENST00000515420 HS6ST2Q96MM7 605 aa11.23□□□□□ -0.61
CLCN3-210ENST00000515420 MOGAT1Q96PD6 335 aa11.23□□□□□ -0.61
CLCN3-210ENST00000515420 UBTD1Q9HAC8 227 aa11.23□□□□□ -0.61
CLCN3-210ENST00000515420 SPAG4Q9NPE6 437 aa11.23□□□□□ -0.61
CLCN3-210ENST00000515420 SLC17A5Q9NRA2 495 aa11.23□□□□□ -0.61
CLCN3-210ENST00000515420 ZNF229Q9UJW7 825 aa11.23□□□□□ -0.61
CLCN3-210ENST00000515420 MGAT4BQ9UQ53 548 aa11.23□□□□□ -0.61
CLCN3-210ENST00000515420 MED13LQ71F56 2210 aa11.23□□□□□ -0.61
CLCN3-210ENST00000515420 HTR3EA5X5Y0 456 aa11.22□□□□□ -0.61
CLCN3-210ENST00000515420 CXCR6O00574 342 aa11.22□□□□□ -0.61
CLCN3-210ENST00000515420 PLPP3O14495 311 aa11.22□□□□□ -0.61
CLCN3-210ENST00000515420 ARID1AO14497 2285 aa11.22□□□□□ -0.61
CLCN3-210ENST00000515420 GSTA4O15217 222 aa11.22□□□□□ -0.61
CLCN3-210ENST00000515420 WNT11O96014 354 aa11.22□□□□□ -0.61
CLCN3-210ENST00000515420 HOXB1P14653 301 aaPredicted RBP11.22□□□□□ -0.61
CLCN3-210ENST00000515420 HIVEP1P15822 2718 aa11.22□□□□□ -0.61
CLCN3-210ENST00000515420 PTAFRP25105 342 aa11.22□□□□□ -0.61
CLCN3-210ENST00000515420 IFNA8P32881 189 aa11.22□□□□□ -0.61
CLCN3-210ENST00000515420 GSK3BP49841 420 aa11.22□□□□□ -0.61
CLCN3-210ENST00000515420 FOXG1P55316 489 aaPredicted RBP11.22□□□□□ -0.61
CLCN3-210ENST00000515420 TAS2R41P59536 307 aa11.22□□□□□ -0.61
CLCN3-210ENST00000515420 PSME3P61289 254 aa11.22□□□□□ -0.61
CLCN3-210ENST00000515420 BSPH1Q075Z2 132 aa11.22□□□□□ -0.61
CLCN3-210ENST00000515420 ZP4Q12836 540 aa11.22□□□□□ -0.61
CLCN3-210ENST00000515420 TMEM108Q6UXF1 575 aa11.22□□□□□ -0.61
CLCN3-210ENST00000515420 DEF8Q6ZN54 512 aa11.22□□□□□ -0.61
CLCN3-210ENST00000515420 CBLL1Q75N03 491 aa11.22□□□□□ -0.61
CLCN3-210ENST00000515420 KDM8Q8N371 416 aa11.22□□□□□ -0.61
CLCN3-210ENST00000515420 C10orf53Q8N6V4 93 aa11.22□□□□□ -0.61
CLCN3-210ENST00000515420 PIK3C3Q8NEB9 887 aa11.22□□□□□ -0.61
CLCN3-210ENST00000515420 MAGEE2Q8TD90 523 aaPredicted RBP11.22□□□□□ -0.61
CLCN3-210ENST00000515420 IGFBPL1Q8WX77 278 aa11.22□□□□□ -0.61
CLCN3-210ENST00000515420 LRR1Q96L50 414 aa11.22□□□□□ -0.61
CLCN3-210ENST00000515420 PRRC1Q96M27 445 aa11.22□□□□□ -0.61
CLCN3-210ENST00000515420 ALKBH3Q96Q83 286 aaPredicted RBP11.22□□□□□ -0.61
CLCN3-210ENST00000515420 LRRC37BQ96QE4 947 aa11.22□□□□□ -0.61
CLCN3-210ENST00000515420 CCL19Q99731 98 aa11.22□□□□□ -0.61
CLCN3-210ENST00000515420 KCTD14Q9BQ13 255 aaPredicted RBP11.22□□□□□ -0.61
CLCN3-210ENST00000515420 PRSS27Q9BQR3 290 aa11.22□□□□□ -0.61
CLCN3-210ENST00000515420 MOV10Q9HCE1 1003 aaKnown RBP11.22□□□□□ -0.61
CLCN3-210ENST00000515420 NANSQ9NR45 359 aa11.22□□□□□ -0.61
CLCN3-210ENST00000515420 NPAP1Q9NZP6 1156 aa11.22□□□□□ -0.61
CLCN3-210ENST00000515420 ITPR3Q14573 2671 aa11.22□□□□□ -0.61
CLCN3-210ENST00000515420 ALPK2Q86TB3 2170 aa11.21□□□□□ -0.61
CLCN3-210ENST00000515420 DPRXA6NFQ7 191 aa11.21□□□□□ -0.61
CLCN3-210ENST00000515420 HPRP00739 348 aa11.21□□□□□ -0.61
CLCN3-210ENST00000515420 MT-ND1P03886 318 aa11.21□□□□□ -0.61
CLCN3-210ENST00000515420 ASAH2BP0C7U1 165 aa11.21□□□□□ -0.61
CLCN3-210ENST00000515420 TNFRSF1BP20333 461 aa11.21□□□□□ -0.61
CLCN3-210ENST00000515420 CBLP22681 906 aa11.21□□□□□ -0.61
CLCN3-210ENST00000515420 OR1E2P47887 323 aa11.21□□□□□ -0.61
CLCN3-210ENST00000515420 PRPS1P60891 318 aa11.21□□□□□ -0.61
CLCN3-210ENST00000515420 POU3F1Q03052 451 aaPredicted RBP11.21□□□□□ -0.61
CLCN3-210ENST00000515420 ST3GAL3Q11203 375 aa11.21□□□□□ -0.61
CLCN3-210ENST00000515420 ALKBH2Q6NS38 261 aa11.21□□□□□ -0.61
CLCN3-210ENST00000515420 HMBOX1Q6NT76 420 aa11.21□□□□□ -0.61
CLCN3-210ENST00000515420 KLHL24Q6TFL4 600 aa11.21□□□□□ -0.61
CLCN3-210ENST00000515420 NHLRC1Q6VVB1 395 aa11.21□□□□□ -0.61
CLCN3-210ENST00000515420 TMEM123Q8N131 208 aa11.21□□□□□ -0.61
CLCN3-210ENST00000515420 GPR137CQ8N3F9 429 aa11.21□□□□□ -0.61
CLCN3-210ENST00000515420 WDR31Q8NA23 367 aa11.21□□□□□ -0.61
CLCN3-210ENST00000515420 OR1K1Q8NGR3 316 aa11.21□□□□□ -0.61
CLCN3-210ENST00000515420 OR52N5Q8NH56 324 aa11.21□□□□□ -0.61
CLCN3-210ENST00000515420 LIPHQ8WWY8 451 aa11.21□□□□□ -0.61
CLCN3-210ENST00000515420 GEMIN6Q8WXD5 167 aaKnown RBP11.21□□□□□ -0.61
CLCN3-210ENST00000515420 AKAP1Q92667 903 aaKnown RBP eCLIP11.21□□□□□ -0.61
CLCN3-210ENST00000515420 FBXW5Q969U6 566 aa11.21□□□□□ -0.61
CLCN3-210ENST00000515420 TPD52L3Q96J77 140 aa11.21□□□□□ -0.61
CLCN3-210ENST00000515420 ADAD1Q96M93 576 aaKnown RBP11.21□□□□□ -0.61
CLCN3-210ENST00000515420 OR2M2Q96R28 347 aa11.21□□□□□ -0.61
CLCN3-210ENST00000515420 NDE1Q9NXR1 346 aa11.21□□□□□ -0.61
CLCN3-210ENST00000515420 RIMS3Q9UJD0 308 aa11.21□□□□□ -0.61
CLCN3-210ENST00000515420 HEATR1Q9H583 2144 aaKnown RBP11.21□□□□□ -0.62
CLCN3-210ENST00000515420 PLCE1Q9P212 2302 aa11.2□□□□□ -0.62
CLCN3-210ENST00000515420 ARPC4-TTLL3A0A0A6YYG9 625 aa11.2□□□□□ -0.62
CLCN3-210ENST00000515420 CLOCKO15516 846 aa11.2□□□□□ -0.62
CLCN3-210ENST00000515420 UPK3AO75631 287 aa11.2□□□□□ -0.62
CLCN3-210ENST00000515420 CH25HO95992 272 aa11.2□□□□□ -0.62
CLCN3-210ENST00000515420 PLAUP00749 431 aa11.2□□□□□ -0.62
CLCN3-210ENST00000515420 IFNW1P05000 195 aa11.2□□□□□ -0.62
CLCN3-210ENST00000515420 ADORA3P0DMS8 318 aa11.2□□□□□ -0.62
CLCN3-210ENST00000515420 PAX1P15863 534 aa11.2□□□□□ -0.62
CLCN3-210ENST00000515420 IL1RL1Q01638 556 aa11.2□□□□□ -0.62
CLCN3-210ENST00000515420 ROR2Q01974 943 aaKnown RBP11.2□□□□□ -0.62
CLCN3-210ENST00000515420 PIN1Q13526 163 aaPredicted RBP11.2□□□□□ -0.62
CLCN3-210ENST00000515420 C3orf36Q3SXR2 165 aa11.2□□□□□ -0.62
CLCN3-210ENST00000515420 SPATS1Q496A3 300 aa11.2□□□□□ -0.62
CLCN3-210ENST00000515420 ZNF672Q499Z4 452 aaPredicted RBP11.2□□□□□ -0.62
CLCN3-210ENST00000515420 IFI44LQ53G44 452 aa11.2□□□□□ -0.62
CLCN3-210ENST00000515420 C9orf135Q5VTT2 229 aa11.2□□□□□ -0.62
CLCN3-210ENST00000515420 SHEQ5VZ18 495 aa11.2□□□□□ -0.62
CLCN3-210ENST00000515420 ANKRD16Q6P6B7 361 aa11.2□□□□□ -0.62
CLCN3-210ENST00000515420 TGIF2LYQ8IUE0 185 aa11.2□□□□□ -0.62
CLCN3-210ENST00000515420 CCDC36Q8IYA8 594 aa11.2□□□□□ -0.62
CLCN3-210ENST00000515420 OFCC1Q8IZS5 231 aa11.2□□□□□ -0.62
CLCN3-210ENST00000515420 PGAM4Q8N0Y7 254 aa11.2□□□□□ -0.62
CLCN3-210ENST00000515420 LILRB1Q8NHL6 650 aaPredicted RBP11.2□□□□□ -0.62
CLCN3-210ENST00000515420 TMEM239Q8WW34 195 aa11.2□□□□□ -0.62
CLCN3-210ENST00000515420 B3GAT2Q9NPZ5 323 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms