RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 ASAH2BP0C7U1 165 aa12.31□□□□□ -0.44
USP46-209ENST00000514536 IFI30P13284 250 aa12.31□□□□□ -0.44
USP46-209ENST00000514536 PPP3CBP16298 524 aa12.31□□□□□ -0.44
USP46-209ENST00000514536 IL32P24001 234 aa12.31□□□□□ -0.44
USP46-209ENST00000514536 FOXG1P55316 489 aaPredicted RBP12.31□□□□□ -0.44
USP46-209ENST00000514536 LGALS3BPQ08380 585 aa12.31□□□□□ -0.44
USP46-209ENST00000514536 IQCCQ4KMZ1 466 aa12.31□□□□□ -0.44
USP46-209ENST00000514536 DNAL1Q4LDG9 190 aa12.31□□□□□ -0.44
USP46-209ENST00000514536 BHLHA15Q7RTS1 189 aaPredicted RBP12.31□□□□□ -0.44
USP46-209ENST00000514536 PIK3C3Q8NEB9 887 aa12.31□□□□□ -0.44
USP46-209ENST00000514536 MCUR1Q96AQ8 359 aa12.31□□□□□ -0.44
USP46-209ENST00000514536 S100PBPQ96BU1 408 aa12.31□□□□□ -0.44
USP46-209ENST00000514536 CCDC124Q96CT7 223 aaKnown RBP12.31□□□□□ -0.44
USP46-209ENST00000514536 TXNDC15Q96J42 360 aa12.31□□□□□ -0.44
USP46-209ENST00000514536 SLCO5A1Q9H2Y9 848 aa12.31□□□□□ -0.44
USP46-209ENST00000514536 MCCC2Q9HCC0 563 aa12.31□□□□□ -0.44
USP46-209ENST00000514536 ASB6Q9NWX5 421 aa12.31□□□□□ -0.44
USP46-209ENST00000514536 CREBBPQ92793 2442 aa12.31□□□□□ -0.44
USP46-209ENST00000514536 FREM1Q5H8C1 2179 aa12.31□□□□□ -0.44
USP46-209ENST00000514536 A0A087WUU8 490 aa12.3□□□□□ -0.44
USP46-209ENST00000514536 A6NNC1 897 aa12.3□□□□□ -0.44
USP46-209ENST00000514536 BLOC1S5-TXNDC5H3BN57 136 aa12.3□□□□□ -0.44
USP46-209ENST00000514536 TRAF3IP2O43734 574 aaPredicted RBP12.3□□□□□ -0.44
USP46-209ENST00000514536 SERPINI2O75830 405 aa12.3□□□□□ -0.44
USP46-209ENST00000514536 KRT33AO76009 404 aa12.3□□□□□ -0.44
USP46-209ENST00000514536 IGF2P01344 180 aa12.3□□□□□ -0.44
USP46-209ENST00000514536 H1F0P07305 194 aaKnown RBP12.3□□□□□ -0.44
USP46-209ENST00000514536 ITGA2P17301 1181 aa12.3□□□□□ -0.44
USP46-209ENST00000514536 DNAJA1P31689 397 aaKnown RBP12.3□□□□□ -0.44
USP46-209ENST00000514536 KRTAP10-9P60411 292 aa12.3□□□□□ -0.44
USP46-209ENST00000514536 POU3F1Q03052 451 aaPredicted RBP12.3□□□□□ -0.44
USP46-209ENST00000514536 ZP4Q12836 540 aa12.3□□□□□ -0.44
USP46-209ENST00000514536 C9orf135Q5VTT2 229 aa12.3□□□□□ -0.44
USP46-209ENST00000514536 LCN8Q6JVE9 175 aa12.3□□□□□ -0.44
USP46-209ENST00000514536 NHLRC1Q6VVB1 395 aa12.3□□□□□ -0.44
USP46-209ENST00000514536 ZNF730Q6ZMV8 503 aa12.3□□□□□ -0.44
USP46-209ENST00000514536 PXKQ7Z7A4 578 aa12.3□□□□□ -0.44
USP46-209ENST00000514536 MEX3DQ86XN8 651 aaKnown RBP12.3□□□□□ -0.44
USP46-209ENST00000514536 NRMQ8IXM6 262 aa12.3□□□□□ -0.44
USP46-209ENST00000514536 ZNF433Q8N7K0 673 aaPredicted RBP12.3□□□□□ -0.44
USP46-209ENST00000514536 POMGNT2Q8NAT1 580 aa12.3□□□□□ -0.44
USP46-209ENST00000514536 ACOT11Q8WXI4 607 aaPredicted RBP12.3□□□□□ -0.44
USP46-209ENST00000514536 SEPHS2Q99611 448 aa12.3□□□□□ -0.44
USP46-209ENST00000514536 PIP5K1AQ99755 562 aa12.3□□□□□ -0.44
USP46-209ENST00000514536 EMC6Q9BV81 110 aa12.3□□□□□ -0.44
USP46-209ENST00000514536 OR10A4Q9H209 315 aa12.3□□□□□ -0.44
USP46-209ENST00000514536 ZNF226Q9NYT6 803 aa12.3□□□□□ -0.44
USP46-209ENST00000514536 MALT1Q9UDY8 824 aa12.3□□□□□ -0.44
USP46-209ENST00000514536 NOX1Q9Y5S8 564 aa12.3□□□□□ -0.44
USP46-209ENST00000514536 TCRBV5S2A0A599 114 aa12.3□□□□□ -0.44
USP46-209ENST00000514536 CIB4A0PJX0 185 aa12.3□□□□□ -0.44
USP46-209ENST00000514536 RNF13O43567 381 aa12.3□□□□□ -0.44
USP46-209ENST00000514536 UPK3AO75631 287 aa12.3□□□□□ -0.44
USP46-209ENST00000514536 CTAG2O75638 210 aa12.3□□□□□ -0.44
USP46-209ENST00000514536 ZNF432O94892 652 aa12.3□□□□□ -0.44
USP46-209ENST00000514536 FABP3P05413 133 aa12.3□□□□□ -0.44
USP46-209ENST00000514536 THBDP07204 575 aa12.3□□□□□ -0.44
USP46-209ENST00000514536 COX5AP20674 150 aa12.3□□□□□ -0.44
USP46-209ENST00000514536 MTX3Q5HYI7 312 aa12.3□□□□□ -0.44
USP46-209ENST00000514536 ALKBH2Q6NS38 261 aa12.3□□□□□ -0.44
USP46-209ENST00000514536 PODNL1Q6PEZ8 512 aa12.3□□□□□ -0.44
USP46-209ENST00000514536 RRM2BQ7LG56 351 aa12.3□□□□□ -0.44
USP46-209ENST00000514536 NANOGNBQ7Z5D8 188 aa12.3□□□□□ -0.44
USP46-209ENST00000514536 TMEM200AQ86VY9 491 aa12.3□□□□□ -0.44
USP46-209ENST00000514536 RNF113BQ8IZP6 322 aaKnown RBP12.3□□□□□ -0.44
USP46-209ENST00000514536 OR52J3Q8NH60 311 aa12.3□□□□□ -0.44
USP46-209ENST00000514536 BPIFA2Q96DR5 249 aa12.3□□□□□ -0.44
USP46-209ENST00000514536 ASB9Q96DX5 294 aa12.3□□□□□ -0.44
USP46-209ENST00000514536 LRGUKQ96M69 825 aa12.3□□□□□ -0.44
USP46-209ENST00000514536 ANKRD19PQ9H560 264 aa12.3□□□□□ -0.44
USP46-209ENST00000514536 IL1RAPQ9NPH3 570 aa12.3□□□□□ -0.44
USP46-209ENST00000514536 MED29Q9NX70 200 aa12.3□□□□□ -0.44
USP46-209ENST00000514536 RCE1Q9Y256 329 aa12.3□□□□□ -0.44
USP46-209ENST00000514536 A0A1W2PRQ8 180 aa12.29□□□□□ -0.44
USP46-209ENST00000514536 FAM221AA4D161 298 aa12.29□□□□□ -0.44
USP46-209ENST00000514536 SLC35F4A4IF30 521 aa12.29□□□□□ -0.44
USP46-209ENST00000514536 HTR3EA5X5Y0 456 aa12.29□□□□□ -0.44
USP46-209ENST00000514536 PDLIM1O00151 329 aa12.29□□□□□ -0.44
USP46-209ENST00000514536 ACOT8O14734 319 aa12.29□□□□□ -0.44
USP46-209ENST00000514536 GSC2O15499 205 aa12.29□□□□□ -0.44
USP46-209ENST00000514536 SLC43A1O75387 559 aa12.29□□□□□ -0.44
USP46-209ENST00000514536 RAD51DO75771 328 aa12.29□□□□□ -0.44
USP46-209ENST00000514536 DNAJC8O75937 253 aaPredicted RBP12.29□□□□□ -0.44
USP46-209ENST00000514536 STAMBPO95630 424 aa12.29□□□□□ -0.44
USP46-209ENST00000514536 ITGA5P08648 1049 aa12.29□□□□□ -0.44
USP46-209ENST00000514536 IFNGR1P15260 489 aa12.29□□□□□ -0.44
USP46-209ENST00000514536 MAKP20794 623 aa12.29□□□□□ -0.44
USP46-209ENST00000514536 AQP2P41181 271 aa12.29□□□□□ -0.44
USP46-209ENST00000514536 PRKCDQ05655 676 aa12.29□□□□□ -0.44
USP46-209ENST00000514536 TRAP1Q12931 704 aaKnown RBP12.29□□□□□ -0.44
USP46-209ENST00000514536 DGCR6Q14129 220 aa12.29□□□□□ -0.44
USP46-209ENST00000514536 LAPTM4AQ15012 233 aa12.29□□□□□ -0.44
USP46-209ENST00000514536 STK11Q15831 433 aa12.29□□□□□ -0.44
USP46-209ENST00000514536 FGD3Q5JSP0 725 aa12.29□□□□□ -0.44
USP46-209ENST00000514536 CARD17Q5XLA6 110 aa12.29□□□□□ -0.44
USP46-209ENST00000514536 FBXW10Q5XX13 1052 aa12.29□□□□□ -0.44
USP46-209ENST00000514536 PGM2L1Q6PCE3 622 aa12.29□□□□□ -0.44
USP46-209ENST00000514536 MBOAT2Q6ZWT7 520 aa12.29□□□□□ -0.44
USP46-209ENST00000514536 WFDC8Q8IUA0 241 aa12.29□□□□□ -0.44
USP46-209ENST00000514536 ZDHHC21Q8IVQ6 265 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms