RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 RPS7P62081 194 aaKnown RBP7.56□□□□□ -1.2
RNF4-220ENST00000513578 ZNF85Q03923 595 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 KRR1Q13601 381 aaKnown RBP7.56□□□□□ -1.2
RNF4-220ENST00000513578 DNASE1L3Q13609 305 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 ZNF846Q147U1 533 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 GLYR1Q49A26 553 aaPredicted RBP7.56□□□□□ -1.2
RNF4-220ENST00000513578 CDONQ4KMG0 1287 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 EEF1A1P5Q5VTE0 462 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 C1QL3Q5VWW1 255 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 LIPKQ5VXJ0 399 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 FAM205BPQ63HN1 556 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 FCRLBQ6BAA4 426 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 TUBA3EQ6PEY2 450 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 SHFQ7M4L6 423 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 IGFN1Q86VF2 1251 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 JAZF1Q86VZ6 243 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 PLCZ1Q86YW0 608 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 ARIH2OSQ8N7S6 290 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 TMEM99Q8N816 258 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 CYB561A3Q8NBI2 242 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 LSM14AQ8ND56 463 aaKnown RBP7.56□□□□□ -1.2
RNF4-220ENST00000513578 PRSS33Q8NF86 280 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 OR2T4Q8NH00 348 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 ZNF519Q8TB69 540 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 POC1BQ8TC44 478 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 SLC25A43Q8WUT9 341 aaPredicted RBP7.56□□□□□ -1.2
RNF4-220ENST00000513578 SPRYD4Q8WW59 207 aaPredicted RBP7.56□□□□□ -1.2
RNF4-220ENST00000513578 ASB15Q8WXK1 588 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 OTULINQ96BN8 352 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 ZBTB8AQ96BR9 441 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 TMEM41AQ96HV5 264 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 IP6K3Q96PC2 410 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 TSPAN32Q96QS1 320 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 NMNAT3Q96T66 252 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 CNN2Q99439 309 aaKnown RBP7.56□□□□□ -1.2
RNF4-220ENST00000513578 CDADC1Q9BWV3 514 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 WDR12Q9GZL7 423 aaKnown RBP7.56□□□□□ -1.2
RNF4-220ENST00000513578 TXNIPQ9H3M7 391 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 PTGES2Q9H7Z7 377 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 ZNF160Q9HCG1 818 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 GALNT9Q9HCQ5 603 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 HMG20AQ9NP66 347 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 AKIP1Q9NQ31 210 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 TRIM36Q9NQ86 728 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 SERINC1Q9NRX5 453 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 INIPQ9NRY2 104 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 TXNL4BQ9NX01 149 aaKnown RBP7.56□□□□□ -1.2
RNF4-220ENST00000513578 VSX1Q9NZR4 365 aaPredicted RBP7.56□□□□□ -1.2
RNF4-220ENST00000513578 MED11Q9P086 117 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 GRHPRQ9UBQ7 328 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 ZNF346Q9UL40 294 aaKnown RBP7.56□□□□□ -1.2
RNF4-220ENST00000513578 POLHQ9Y253 713 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 B3GNT3Q9Y2A9 372 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 KIAA1549Q9HCM3 1950 aa7.56□□□□□ -1.2
RNF4-220ENST00000513578 PCSK5Q92824 1860 aa7.55□□□□□ -1.2
RNF4-220ENST00000513578 ARPC4-TTLL3A0A0A6YYG9 625 aa7.55□□□□□ -1.2
RNF4-220ENST00000513578 LOC100506127A0A0U1RQW1 187 aa7.55□□□□□ -1.2
RNF4-220ENST00000513578 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.55□□□□□ -1.2
RNF4-220ENST00000513578 LOC102725191A0A1B0GVB3 256 aa7.55□□□□□ -1.2
RNF4-220ENST00000513578 A0A1W2PNV4 684 aa7.55□□□□□ -1.2
RNF4-220ENST00000513578 A6NIZ1 184 aa7.55□□□□□ -1.2
RNF4-220ENST00000513578 HSPB2A8KAH6 182 aa7.55□□□□□ -1.2
RNF4-220ENST00000513578 SNPHO15079 494 aa7.55□□□□□ -1.2
RNF4-220ENST00000513578 OGG1O15527 345 aa7.55□□□□□ -1.2
RNF4-220ENST00000513578 SEC14L5O43304 696 aa7.55□□□□□ -1.2
RNF4-220ENST00000513578 SNX4O95219 450 aa7.55□□□□□ -1.2
RNF4-220ENST00000513578 APOL3O95236 402 aa7.55□□□□□ -1.2
RNF4-220ENST00000513578 WISP1O95388 367 aa7.55□□□□□ -1.2
RNF4-220ENST00000513578 TFP02787 698 aa7.55□□□□□ -1.2
RNF4-220ENST00000513578 CLUP10909 449 aa7.55□□□□□ -1.2
RNF4-220ENST00000513578 SOX6P35712 828 aa7.55□□□□□ -1.2
RNF4-220ENST00000513578 CD79BP40259 229 aa7.55□□□□□ -1.2
RNF4-220ENST00000513578 ETV6P41212 452 aa7.55□□□□□ -1.2
RNF4-220ENST00000513578 RAP1BP61224 184 aa7.55□□□□□ -1.2
RNF4-220ENST00000513578 RPL27P61353 136 aaKnown RBP7.55□□□□□ -1.2
RNF4-220ENST00000513578 ACTA2P62736 377 aa7.55□□□□□ -1.2
RNF4-220ENST00000513578 RAP1AP62834 184 aa7.55□□□□□ -1.2
RNF4-220ENST00000513578 ACTG2P63267 376 aa7.55□□□□□ -1.2
RNF4-220ENST00000513578 FOXF1Q12946 379 aa7.55□□□□□ -1.2
RNF4-220ENST00000513578 MRPL28Q13084 256 aaKnown RBP7.55□□□□□ -1.2
RNF4-220ENST00000513578 TRIP6Q15654 476 aaKnown RBP7.55□□□□□ -1.2
RNF4-220ENST00000513578 HSPB2Q16082 182 aa7.55□□□□□ -1.2
RNF4-220ENST00000513578 CCDC58Q4VC31 144 aa7.55□□□□□ -1.2
RNF4-220ENST00000513578 MESTQ5EB52 335 aa7.55□□□□□ -1.2
RNF4-220ENST00000513578 HES3Q5TGS1 186 aa7.55□□□□□ -1.2
RNF4-220ENST00000513578 SLC22A10Q63ZE4 541 aa7.55□□□□□ -1.2
RNF4-220ENST00000513578 LEG1Q6P5S2 330 aa7.55□□□□□ -1.2
RNF4-220ENST00000513578 VASH1Q7L8A9 365 aaPredicted RBP7.55□□□□□ -1.2
RNF4-220ENST00000513578 SLC16A9Q7RTY1 509 aa7.55□□□□□ -1.2
RNF4-220ENST00000513578 KCTD20Q7Z5Y7 419 aa7.55□□□□□ -1.2
RNF4-220ENST00000513578 ZBTB46Q86UZ6 589 aa7.55□□□□□ -1.2
RNF4-220ENST00000513578 RAB43Q86YS6 212 aa7.55□□□□□ -1.2
RNF4-220ENST00000513578 SLC35F2Q8IXU6 374 aa7.55□□□□□ -1.2
RNF4-220ENST00000513578 WDSUB1Q8N9V3 476 aa7.55□□□□□ -1.2
RNF4-220ENST00000513578 ATP6V1C2Q8NEY4 427 aa7.55□□□□□ -1.2
RNF4-220ENST00000513578 NLGN4YQ8NFZ3 816 aaPredicted RBP7.55□□□□□ -1.2
RNF4-220ENST00000513578 OR10H4Q8NGA5 316 aa7.55□□□□□ -1.2
RNF4-220ENST00000513578 MCFD2Q8NI22 146 aa7.55□□□□□ -1.2
RNF4-220ENST00000513578 RASD2Q96D21 266 aa7.55□□□□□ -1.2
RNF4-220ENST00000513578 C1GALT1C1Q96EU7 318 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms