RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 GKN2Q86XP6 184 aa16.34■□□□□ 0.21
CCHCR1-228ENST00000509552 LRRC75AQ8NAA5 344 aa16.34■□□□□ 0.21
CCHCR1-228ENST00000509552 ZSCAN1Q8NBB4 408 aa16.34■□□□□ 0.21
CCHCR1-228ENST00000509552 TGM7Q96PF1 710 aa16.34■□□□□ 0.21
CCHCR1-228ENST00000509552 TSSK2Q96PF2 358 aa16.34■□□□□ 0.21
CCHCR1-228ENST00000509552 TCF7L1Q9HCS4 588 aa16.34■□□□□ 0.21
CCHCR1-228ENST00000509552 SRA1Q9HD15 236 aaKnown RBP16.34■□□□□ 0.21
CCHCR1-228ENST00000509552 GMEB2Q9UKD1 530 aa16.34■□□□□ 0.21
CCHCR1-228ENST00000509552 KNL1Q8NG31 2342 aa16.33■□□□□ 0.21
CCHCR1-228ENST00000509552 LILRA5A6NI73 299 aa16.33■□□□□ 0.2
CCHCR1-228ENST00000509552 WNT1P04628 370 aa16.33■□□□□ 0.2
CCHCR1-228ENST00000509552 HIST1H2ABP04908 130 aa16.33■□□□□ 0.2
CCHCR1-228ENST00000509552 F13BP05160 661 aa16.33■□□□□ 0.2
CCHCR1-228ENST00000509552 ASAH2BP0C7U1 165 aa16.33■□□□□ 0.2
CCHCR1-228ENST00000509552 OR8G3PP0DMU2 310 aa16.33■□□□□ 0.2
CCHCR1-228ENST00000509552 GLULP15104 373 aa16.33■□□□□ 0.2
CCHCR1-228ENST00000509552 SLC37A1P57057 533 aa16.33■□□□□ 0.2
CCHCR1-228ENST00000509552 AP3S2P59780 193 aa16.33■□□□□ 0.2
CCHCR1-228ENST00000509552 GSG1Q2KHT4 349 aa16.33■□□□□ 0.2
CCHCR1-228ENST00000509552 EMC4Q5J8M3 183 aa16.33■□□□□ 0.2
CCHCR1-228ENST00000509552 FAM69AQ5T7M9 428 aa16.33■□□□□ 0.2
CCHCR1-228ENST00000509552 Q6ZS52 159 aa16.33■□□□□ 0.2
CCHCR1-228ENST00000509552 FCRLAQ7L513 359 aa16.33■□□□□ 0.2
CCHCR1-228ENST00000509552 HIST3H2AQ7L7L0 130 aa16.33■□□□□ 0.2
CCHCR1-228ENST00000509552 CDH24Q86UP0 819 aa16.33■□□□□ 0.2
CCHCR1-228ENST00000509552 OR5AK2Q8NH90 309 aa16.33■□□□□ 0.2
CCHCR1-228ENST00000509552 LMX1AQ8TE12 382 aa16.33■□□□□ 0.2
CCHCR1-228ENST00000509552 PTPMT1Q8WUK0 201 aaPredicted RBP16.33■□□□□ 0.2
CCHCR1-228ENST00000509552 HIST1H2ACQ93077 130 aa16.33■□□□□ 0.2
CCHCR1-228ENST00000509552 SLC46A1Q96NT5 459 aa16.33■□□□□ 0.2
CCHCR1-228ENST00000509552 GFI1Q99684 422 aa16.33■□□□□ 0.2
CCHCR1-228ENST00000509552 LIN7BQ9HAP6 207 aa16.33■□□□□ 0.2
CCHCR1-228ENST00000509552 PTTG3PQ9NZH4 202 aa16.33■□□□□ 0.2
CCHCR1-228ENST00000509552 C4orf47A7E2U8 309 aa16.33■□□□□ 0.2
CCHCR1-228ENST00000509552 PRR32B1ATL7 298 aa16.33■□□□□ 0.2
CCHCR1-228ENST00000509552 TXNDC12O95881 172 aa16.33■□□□□ 0.2
CCHCR1-228ENST00000509552 RORAP35398 523 aa16.33■□□□□ 0.2
CCHCR1-228ENST00000509552 GPLD1P80108 840 aa16.33■□□□□ 0.2
CCHCR1-228ENST00000509552 ALKBH1Q13686 389 aaKnown RBP16.33■□□□□ 0.2
CCHCR1-228ENST00000509552 GRM7Q14831 915 aa16.33■□□□□ 0.2
CCHCR1-228ENST00000509552 Q499Y3 187 aa16.33■□□□□ 0.2
CCHCR1-228ENST00000509552 ZNF782Q6ZMW2 699 aaPredicted RBP16.33■□□□□ 0.2
CCHCR1-228ENST00000509552 NANOGNBQ7Z5D8 188 aa16.33■□□□□ 0.2
CCHCR1-228ENST00000509552 EXD3Q8N9H8 876 aa16.33■□□□□ 0.2
CCHCR1-228ENST00000509552 SMRP1Q8NCR6 262 aa16.33■□□□□ 0.2
CCHCR1-228ENST00000509552 GIMAP1Q8WWP7 306 aa16.33■□□□□ 0.2
CCHCR1-228ENST00000509552 RGP1Q92546 391 aaPredicted RBP16.33■□□□□ 0.2
CCHCR1-228ENST00000509552 S100A16Q96FQ6 103 aaKnown RBP16.33■□□□□ 0.2
CCHCR1-228ENST00000509552 SPRTNQ9H040 489 aaPredicted RBP16.33■□□□□ 0.2
CCHCR1-228ENST00000509552 NXF5Q9H1B4 397 aaKnown RBP16.33■□□□□ 0.2
CCHCR1-228ENST00000509552 PLEKHA1Q9HB21 404 aa16.33■□□□□ 0.2
CCHCR1-228ENST00000509552 MGAT4AQ9UM21 535 aa16.33■□□□□ 0.2
CCHCR1-228ENST00000509552 TMEM150CB9EJG8 249 aa16.32■□□□□ 0.2
CCHCR1-228ENST00000509552 GABARAPH6UMI1 98 aa16.32■□□□□ 0.2
CCHCR1-228ENST00000509552 ADRB1P08588 477 aa16.32■□□□□ 0.2
CCHCR1-228ENST00000509552 DPP4P27487 766 aa16.32■□□□□ 0.2
CCHCR1-228ENST00000509552 UQCRC1P31930 480 aa16.32■□□□□ 0.2
CCHCR1-228ENST00000509552 RPL6Q02878 288 aaKnown RBP16.32■□□□□ 0.2
CCHCR1-228ENST00000509552 C1QTNF12Q5T7M4 302 aa16.32■□□□□ 0.2
CCHCR1-228ENST00000509552 LIPNQ5VXI9 398 aa16.32■□□□□ 0.2
CCHCR1-228ENST00000509552 FGD2Q7Z6J4 655 aa16.32■□□□□ 0.2
CCHCR1-228ENST00000509552 OR2T4Q8NH00 348 aa16.32■□□□□ 0.2
CCHCR1-228ENST00000509552 LPAR4Q99677 370 aa16.32■□□□□ 0.2
CCHCR1-228ENST00000509552 SLX1AQ9BQ83 275 aa16.32■□□□□ 0.2
CCHCR1-228ENST00000509552 TSPAN10Q9H1Z9 355 aaPredicted RBP16.32■□□□□ 0.2
CCHCR1-228ENST00000509552 SLCO1C1Q9NYB5 712 aa16.32■□□□□ 0.2
CCHCR1-228ENST00000509552 KLHL9Q9P2J3 617 aa16.32■□□□□ 0.2
CCHCR1-228ENST00000509552 IGHV5-51A0A0C4DH38 117 aa16.31■□□□□ 0.2
CCHCR1-228ENST00000509552 TLCD2A6NGC4 264 aa16.31■□□□□ 0.2
CCHCR1-228ENST00000509552 A8MUA0 341 aa16.31■□□□□ 0.2
CCHCR1-228ENST00000509552 C2CD4DB7Z1M9 353 aa16.31■□□□□ 0.2
CCHCR1-228ENST00000509552 SSNA1O43805 119 aa16.31■□□□□ 0.2
CCHCR1-228ENST00000509552 TSC22D2O75157 780 aa16.31■□□□□ 0.2
CCHCR1-228ENST00000509552 RENP00797 406 aa16.31■□□□□ 0.2
CCHCR1-228ENST00000509552 CALCBP10092 127 aa16.31■□□□□ 0.2
CCHCR1-228ENST00000509552 MAGEB1P43366 347 aa16.31■□□□□ 0.2
CCHCR1-228ENST00000509552 GFERP55789 205 aa16.31■□□□□ 0.2
CCHCR1-228ENST00000509552 EGR4Q05215 589 aa16.31■□□□□ 0.2
CCHCR1-228ENST00000509552 TMEM151BQ8IW70 566 aa16.31■□□□□ 0.2
CCHCR1-228ENST00000509552 EID2Q8N6I1 236 aa16.31■□□□□ 0.2
CCHCR1-228ENST00000509552 ZNF321PQ8N8H1 164 aa16.31■□□□□ 0.2
CCHCR1-228ENST00000509552 LCORQ96JN0 433 aaPredicted RBP16.31■□□□□ 0.2
CCHCR1-228ENST00000509552 OR8D2Q9GZM6 311 aa16.31■□□□□ 0.2
CCHCR1-228ENST00000509552 IRF2BPLQ9H1B7 796 aa16.31■□□□□ 0.2
CCHCR1-228ENST00000509552 ANKRD10Q9NXR5 420 aa16.31■□□□□ 0.2
CCHCR1-228ENST00000509552 EPHA6Q9UF33 1036 aa16.31■□□□□ 0.2
CCHCR1-228ENST00000509552 MRM2Q9UI43 246 aaKnown RBP16.31■□□□□ 0.2
CCHCR1-228ENST00000509552 LAMP5Q9UJQ1 280 aa16.31■□□□□ 0.2
CCHCR1-228ENST00000509552 ZNF346Q9UL40 294 aaKnown RBP16.31■□□□□ 0.2
CCHCR1-228ENST00000509552 RCE1Q9Y256 329 aa16.31■□□□□ 0.2
CCHCR1-228ENST00000509552 A0A1B0GVI7 797 aa16.31■□□□□ 0.2
CCHCR1-228ENST00000509552 FITM1A5D6W6 292 aa16.31■□□□□ 0.2
CCHCR1-228ENST00000509552 NAP1L6A6NFF2 107 aa16.31■□□□□ 0.2
CCHCR1-228ENST00000509552 SHISA7A6NL88 538 aa16.31■□□□□ 0.2
CCHCR1-228ENST00000509552 ERVH48-1M5A8F1 160 aa16.31■□□□□ 0.2
CCHCR1-228ENST00000509552 SULT1B1O43704 296 aa16.31■□□□□ 0.2
CCHCR1-228ENST00000509552 UPK3AO75631 287 aa16.31■□□□□ 0.2
CCHCR1-228ENST00000509552 KRT33AO76009 404 aa16.31■□□□□ 0.2
CCHCR1-228ENST00000509552 RAB40ALP0C0E4 278 aa16.31■□□□□ 0.2
CCHCR1-228ENST00000509552 TACR3P29371 465 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms