RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 MEN1O00255 615 aa10.28□□□□□ -0.76
NFKB1-205ENST00000505458 FZD7O75084 574 aa10.28□□□□□ -0.76
NFKB1-205ENST00000505458 TFP02787 698 aa10.28□□□□□ -0.76
NFKB1-205ENST00000505458 CD8BP10966 210 aa10.28□□□□□ -0.76
NFKB1-205ENST00000505458 TSPAN7P41732 249 aa10.28□□□□□ -0.76
NFKB1-205ENST00000505458 CD97P48960 835 aa10.28□□□□□ -0.76
NFKB1-205ENST00000505458 DAP3P51398 398 aaKnown RBP10.28□□□□□ -0.76
NFKB1-205ENST00000505458 EFNA3P52797 238 aa10.28□□□□□ -0.76
NFKB1-205ENST00000505458 RPL27P61353 136 aaKnown RBP10.28□□□□□ -0.76
NFKB1-205ENST00000505458 SNTA1Q13424 505 aa10.28□□□□□ -0.76
NFKB1-205ENST00000505458 LINC01590Q5TEZ4 76 aa10.28□□□□□ -0.76
NFKB1-205ENST00000505458 TMPRSS9Q7Z410 1059 aa10.28□□□□□ -0.76
NFKB1-205ENST00000505458 CEACAM19Q7Z692 300 aa10.28□□□□□ -0.76
NFKB1-205ENST00000505458 ADPRHL1Q8NDY3 354 aa10.28□□□□□ -0.76
NFKB1-205ENST00000505458 MOGAT1Q96PD6 335 aa10.28□□□□□ -0.76
NFKB1-205ENST00000505458 NRSN2Q9GZP1 204 aa10.28□□□□□ -0.76
NFKB1-205ENST00000505458 WDR76Q9H967 626 aa10.28□□□□□ -0.76
NFKB1-205ENST00000505458 SERINC1Q9NRX5 453 aa10.28□□□□□ -0.76
NFKB1-205ENST00000505458 A0A1W2PRG6 482 aa10.28□□□□□ -0.76
NFKB1-205ENST00000505458 ZC3H12DA2A288 527 aaKnown RBP10.28□□□□□ -0.76
NFKB1-205ENST00000505458 HLA-DQB1P01920 261 aa10.28□□□□□ -0.76
NFKB1-205ENST00000505458 CRABP1P29762 137 aa10.28□□□□□ -0.76
NFKB1-205ENST00000505458 RANBP1P43487 201 aa10.28□□□□□ -0.76
NFKB1-205ENST00000505458 OR12D2P58182 307 aa10.28□□□□□ -0.76
NFKB1-205ENST00000505458 COL28A1Q2UY09 1125 aa10.28□□□□□ -0.76
NFKB1-205ENST00000505458 ACSM3Q53FZ2 586 aa10.28□□□□□ -0.76
NFKB1-205ENST00000505458 PELI1Q96FA3 418 aa10.28□□□□□ -0.76
NFKB1-205ENST00000505458 ZPBPQ9BS86 351 aa10.28□□□□□ -0.76
NFKB1-205ENST00000505458 MIXL1Q9H2W2 232 aa10.28□□□□□ -0.76
NFKB1-205ENST00000505458 CLEC2LP0C7M8 214 aa10.27□□□□□ -0.77
NFKB1-205ENST00000505458 CLUP10909 449 aa10.27□□□□□ -0.77
NFKB1-205ENST00000505458 IL7P13232 177 aa10.27□□□□□ -0.77
NFKB1-205ENST00000505458 MYF5P13349 255 aa10.27□□□□□ -0.77
NFKB1-205ENST00000505458 RBMS1P29558 406 aaKnown RBP10.27□□□□□ -0.77
NFKB1-205ENST00000505458 ZNF41P51814 821 aaPredicted RBP10.27□□□□□ -0.77
NFKB1-205ENST00000505458 TRIQKQ629K1 86 aa10.27□□□□□ -0.77
NFKB1-205ENST00000505458 MZT2BQ6NZ67 158 aa10.27□□□□□ -0.77
NFKB1-205ENST00000505458 ZNF454Q8N9F8 522 aa10.27□□□□□ -0.77
NFKB1-205ENST00000505458 TXNDC15Q96J42 360 aa10.27□□□□□ -0.77
NFKB1-205ENST00000505458 TSPAN32Q96QS1 320 aa10.27□□□□□ -0.77
NFKB1-205ENST00000505458 SLITRK2Q9H156 845 aa10.27□□□□□ -0.77
NFKB1-205ENST00000505458 RERGLQ9H628 205 aa10.27□□□□□ -0.77
NFKB1-205ENST00000505458 RPRD1BQ9NQG5 326 aaKnown RBP10.27□□□□□ -0.77
NFKB1-205ENST00000505458 QPCTLQ9NXS2 382 aa10.27□□□□□ -0.77
NFKB1-205ENST00000505458 VSX1Q9NZR4 365 aaPredicted RBP10.27□□□□□ -0.77
NFKB1-205ENST00000505458 GNG8Q9UK08 70 aa10.27□□□□□ -0.77
NFKB1-205ENST00000505458 CDH23Q9H251 3354 aa10.27□□□□□ -0.77
NFKB1-205ENST00000505458 ITGA10O75578 1167 aa10.27□□□□□ -0.77
NFKB1-205ENST00000505458 GYPBP06028 91 aa10.27□□□□□ -0.77
NFKB1-205ENST00000505458 UCHL1P09936 223 aa10.27□□□□□ -0.77
NFKB1-205ENST00000505458 FBXO45P0C2W1 286 aa10.27□□□□□ -0.77
NFKB1-205ENST00000505458 EDNRAP25101 427 aa10.27□□□□□ -0.77
NFKB1-205ENST00000505458 NR4A2P43354 598 aa10.27□□□□□ -0.77
NFKB1-205ENST00000505458 RPS5P46782 204 aaKnown RBP10.27□□□□□ -0.77
NFKB1-205ENST00000505458 EVX1P49640 407 aa10.27□□□□□ -0.77
NFKB1-205ENST00000505458 ZFP36L1Q07352 338 aaKnown RBP10.27□□□□□ -0.77
NFKB1-205ENST00000505458 SLC3A1Q07837 685 aa10.27□□□□□ -0.77
NFKB1-205ENST00000505458 TRIM61Q5EBN2 209 aa10.27□□□□□ -0.77
NFKB1-205ENST00000505458 SLC25A43Q8WUT9 341 aaPredicted RBP10.27□□□□□ -0.77
NFKB1-205ENST00000505458 GHSRQ92847 366 aa10.27□□□□□ -0.77
NFKB1-205ENST00000505458 SOSTQ9BQB4 213 aa10.27□□□□□ -0.77
NFKB1-205ENST00000505458 DEFB126Q9BYW3 111 aa10.27□□□□□ -0.77
NFKB1-205ENST00000505458 PPP4R1LQ9P1A2 415 aa10.27□□□□□ -0.77
NFKB1-205ENST00000505458 CDC14CA4D256 554 aa10.27□□□□□ -0.77
NFKB1-205ENST00000505458 NOTOA8MTQ0 251 aa10.27□□□□□ -0.77
NFKB1-205ENST00000505458 FLRT2O43155 660 aa10.27□□□□□ -0.77
NFKB1-205ENST00000505458 LRRTM2O43300 516 aa10.27□□□□□ -0.77
NFKB1-205ENST00000505458 RAB3BP20337 219 aa10.27□□□□□ -0.77
NFKB1-205ENST00000505458 NAA10P41227 235 aaPredicted RBP10.27□□□□□ -0.77
NFKB1-205ENST00000505458 CDKN2AP42771 156 aaKnown RBP10.27□□□□□ -0.77
NFKB1-205ENST00000505458 PSMD7P51665 324 aa10.27□□□□□ -0.77
NFKB1-205ENST00000505458 DNASE1L3Q13609 305 aa10.27□□□□□ -0.77
NFKB1-205ENST00000505458 ZMAT1Q5H9K5 638 aa10.27□□□□□ -0.77
NFKB1-205ENST00000505458 CDC20BQ86Y33 519 aa10.27□□□□□ -0.77
NFKB1-205ENST00000505458 INTS14Q96SY0 518 aa10.27□□□□□ -0.77
NFKB1-205ENST00000505458 WDR77Q9BQA1 342 aaPredicted RBP10.27□□□□□ -0.77
NFKB1-205ENST00000505458 FAM117AQ9C073 453 aa10.27□□□□□ -0.77
NFKB1-205ENST00000505458 FANCFQ9NPI8 374 aa10.27□□□□□ -0.77
NFKB1-205ENST00000505458 PISDQ9UG56 409 aa10.27□□□□□ -0.77
NFKB1-205ENST00000505458 ZNF281Q9Y2X9 895 aa10.27□□□□□ -0.77
NFKB1-205ENST00000505458 PCDHGA5Q9Y5G8 931 aa10.27□□□□□ -0.77
NFKB1-205ENST00000505458 MPDZO75970 2070 aa10.26□□□□□ -0.77
NFKB1-205ENST00000505458 TRBV2A0A0J9YWF9 115 aa10.26□□□□□ -0.77
NFKB1-205ENST00000505458 LRRN3E7EW58 273 aa10.26□□□□□ -0.77
NFKB1-205ENST00000505458 TPPPO94811 219 aa10.26□□□□□ -0.77
NFKB1-205ENST00000505458 PRKCAP17252 672 aa10.26□□□□□ -0.77
NFKB1-205ENST00000505458 APEX1P27695 318 aaKnown RBP10.26□□□□□ -0.77
NFKB1-205ENST00000505458 EIF1P41567 113 aaKnown RBP10.26□□□□□ -0.77
NFKB1-205ENST00000505458 LTBQ06643 244 aa10.26□□□□□ -0.77
NFKB1-205ENST00000505458 RASGEF1BQ0VAM2 473 aa10.26□□□□□ -0.77
NFKB1-205ENST00000505458 ZNF79Q15937 498 aa10.26□□□□□ -0.77
NFKB1-205ENST00000505458 PYDC2Q56P42 97 aa10.26□□□□□ -0.77
NFKB1-205ENST00000505458 ADGRG3Q86Y34 549 aa10.26□□□□□ -0.77
NFKB1-205ENST00000505458 C19orf18Q8NEA5 215 aa10.26□□□□□ -0.77
NFKB1-205ENST00000505458 FAM83FQ8NEG4 500 aaPredicted RBP10.26□□□□□ -0.77
NFKB1-205ENST00000505458 SDHCQ99643 169 aaPredicted RBP10.26□□□□□ -0.77
NFKB1-205ENST00000505458 PTDSS2Q9BVG9 487 aa10.26□□□□□ -0.77
NFKB1-205ENST00000505458 MYOTQ9UBF9 498 aa10.26□□□□□ -0.77
NFKB1-205ENST00000505458 COMMD3Q9UBI1 195 aa10.26□□□□□ -0.77
NFKB1-205ENST00000505458 FBXL4Q9UKA2 621 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms