RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 CXCL17Q6UXB2 119 aa4.03□□□□□ -1.76
HMGB1P3-201ENST00000502802 LRRC31Q6UY01 552 aa4.03□□□□□ -1.76
HMGB1P3-201ENST00000502802 HSDL2Q6YN16 418 aa4.03□□□□□ -1.76
HMGB1P3-201ENST00000502802 ACOT7LQ6ZUV0 252 aa4.03□□□□□ -1.76
HMGB1P3-201ENST00000502802 PGAP1Q75T13 922 aa4.03□□□□□ -1.76
HMGB1P3-201ENST00000502802 HPS6Q86YV9 775 aa4.03□□□□□ -1.76
HMGB1P3-201ENST00000502802 SKA3Q8IX90 412 aa4.03□□□□□ -1.76
HMGB1P3-201ENST00000502802 GPR137CQ8N3F9 429 aa4.03□□□□□ -1.76
HMGB1P3-201ENST00000502802 DNAJA4Q8WW22 397 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P3-201ENST00000502802 TM4SF19Q96DZ7 209 aa4.03□□□□□ -1.76
HMGB1P3-201ENST00000502802 PLEKHA8Q96JA3 519 aa4.03□□□□□ -1.76
HMGB1P3-201ENST00000502802 PANX2Q96RD6 677 aa4.03□□□□□ -1.76
HMGB1P3-201ENST00000502802 CHP1Q99653 195 aa4.03□□□□□ -1.76
HMGB1P3-201ENST00000502802 GAL3ST1Q99999 423 aa4.03□□□□□ -1.76
HMGB1P3-201ENST00000502802 CENPKQ9BS16 269 aa4.03□□□□□ -1.76
HMGB1P3-201ENST00000502802 RNF126Q9BV68 326 aa4.03□□□□□ -1.76
HMGB1P3-201ENST00000502802 THUMPD1Q9NXG2 353 aaKnown RBP4.03□□□□□ -1.76
HMGB1P3-201ENST00000502802 RPL36Q9Y3U8 105 aaKnown RBP4.03□□□□□ -1.76
HMGB1P3-201ENST00000502802 FLVCR1Q9Y5Y0 555 aa4.03□□□□□ -1.76
HMGB1P3-201ENST00000502802 GON4LQ3T8J9 2241 aa4.03□□□□□ -1.76
HMGB1P3-201ENST00000502802 SHANK3Q9BYB0 1731 aa4.03□□□□□ -1.76
HMGB1P3-201ENST00000502802 CD163L1Q9NR16 1453 aa4.03□□□□□ -1.76
HMGB1P3-201ENST00000502802 NHSQ6T4R5 1651 aa4.03□□□□□ -1.76
HMGB1P3-201ENST00000502802 KTN1Q86UP2 1357 aaKnown RBP4.02□□□□□ -1.77
HMGB1P3-201ENST00000502802 TTC21AQ8NDW8 1320 aa4.02□□□□□ -1.77
HMGB1P3-201ENST00000502802 ABCC6O95255 1503 aa4.02□□□□□ -1.77
HMGB1P3-201ENST00000502802 QSER1Q2KHR3 1735 aa4.02□□□□□ -1.77
HMGB1P3-201ENST00000502802 IGLV8-61A0A075B6I0 122 aa4.02□□□□□ -1.77
HMGB1P3-201ENST00000502802 A0A1W2PPV9 198 aa4.02□□□□□ -1.77
HMGB1P3-201ENST00000502802 TCP11X1B4DZS4 312 aa4.02□□□□□ -1.77
HMGB1P3-201ENST00000502802 DCTN6O00399 190 aa4.02□□□□□ -1.77
HMGB1P3-201ENST00000502802 TMEM50AO95807 157 aa4.02□□□□□ -1.77
HMGB1P3-201ENST00000502802 MMP1P03956 469 aa4.02□□□□□ -1.77
HMGB1P3-201ENST00000502802 P04436 131 aa4.02□□□□□ -1.77
HMGB1P3-201ENST00000502802 ASGR1P07306 291 aa4.02□□□□□ -1.77
HMGB1P3-201ENST00000502802 OR8U8P0C7N1 319 aa4.02□□□□□ -1.77
HMGB1P3-201ENST00000502802 KITLGP21583 273 aa4.02□□□□□ -1.77
HMGB1P3-201ENST00000502802 CHMLP26374 656 aa4.02□□□□□ -1.77
HMGB1P3-201ENST00000502802 GDF1P27539 372 aa4.02□□□□□ -1.77
HMGB1P3-201ENST00000502802 IL12AP29459 219 aa4.02□□□□□ -1.77
HMGB1P3-201ENST00000502802 HTR1FP30939 366 aa4.02□□□□□ -1.77
HMGB1P3-201ENST00000502802 HNRNPH3P31942 346 aaKnown RBP4.02□□□□□ -1.77
HMGB1P3-201ENST00000502802 UGT1A3P35503 534 aa4.02□□□□□ -1.77
HMGB1P3-201ENST00000502802 SYKP43405 635 aa4.02□□□□□ -1.77
HMGB1P3-201ENST00000502802 VEGFCP49767 419 aa4.02□□□□□ -1.77
HMGB1P3-201ENST00000502802 BIDP55957 195 aa4.02□□□□□ -1.77
HMGB1P3-201ENST00000502802 SCRN3Q0VDG4 424 aa4.02□□□□□ -1.77
HMGB1P3-201ENST00000502802 Q1RN00 199 aa4.02□□□□□ -1.77
HMGB1P3-201ENST00000502802 LRRC36Q1X8D7 754 aa4.02□□□□□ -1.77
HMGB1P3-201ENST00000502802 SBK1Q52WX2 424 aa4.02□□□□□ -1.77
HMGB1P3-201ENST00000502802 OR2B11Q5JQS5 317 aa4.02□□□□□ -1.77
HMGB1P3-201ENST00000502802 RNLSQ5VYX0 342 aa4.02□□□□□ -1.77
HMGB1P3-201ENST00000502802 OR52E8Q6IFG1 317 aa4.02□□□□□ -1.77
HMGB1P3-201ENST00000502802 CGB2Q6NT52 195 aa4.02□□□□□ -1.77
HMGB1P3-201ENST00000502802 FRA10AC1Q70Z53 315 aa4.02□□□□□ -1.77
HMGB1P3-201ENST00000502802 GDPD3Q7L5L3 318 aa4.02□□□□□ -1.77
HMGB1P3-201ENST00000502802 NUDCD3Q8IVD9 361 aa4.02□□□□□ -1.77
HMGB1P3-201ENST00000502802 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P3-201ENST00000502802 ZPLD1Q8TCW7 415 aa4.02□□□□□ -1.77
HMGB1P3-201ENST00000502802 AGR3Q8TD06 166 aa4.02□□□□□ -1.77
HMGB1P3-201ENST00000502802 GTSF1Q8WW33 167 aa4.02□□□□□ -1.77
HMGB1P3-201ENST00000502802 FGGYQ96C11 551 aa4.02□□□□□ -1.77
HMGB1P3-201ENST00000502802 PKNOX2Q96KN3 472 aa4.02□□□□□ -1.77
HMGB1P3-201ENST00000502802 OXGR1Q96P68 337 aa4.02□□□□□ -1.77
HMGB1P3-201ENST00000502802 ATOH8Q96SQ7 321 aa4.02□□□□□ -1.77
HMGB1P3-201ENST00000502802 KLHDC3Q9BQ90 382 aa4.02□□□□□ -1.77
HMGB1P3-201ENST00000502802 EXO5Q9H790 373 aa4.02□□□□□ -1.77
HMGB1P3-201ENST00000502802 GLRX2Q9NS18 164 aa4.02□□□□□ -1.77
HMGB1P3-201ENST00000502802 DDX18Q9NVP1 670 aaKnown RBP4.02□□□□□ -1.77
HMGB1P3-201ENST00000502802 PSMC3IPQ9P2W1 217 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P3-201ENST00000502802 FAM208AQ9UK61 1670 aaKnown RBP4.02□□□□□ -1.77
HMGB1P3-201ENST00000502802 OVOS2A0A0G2JMS6 1433 aa4.02□□□□□ -1.77
HMGB1P3-201ENST00000502802 OVOS2A0A0J9YW53 1432 aa4.02□□□□□ -1.77
HMGB1P3-201ENST00000502802 OVOS2Q6IE36 1432 aa4.02□□□□□ -1.77
HMGB1P3-201ENST00000502802 ITGB4P16144 1822 aa4.02□□□□□ -1.77
HMGB1P3-201ENST00000502802 KIF20BQ96Q89 1820 aa4.02□□□□□ -1.77
HMGB1P3-201ENST00000502802 CEP350Q5VT06 3117 aa4.01□□□□□ -1.77
HMGB1P3-201ENST00000502802 COL24A1Q17RW2 1714 aa4.01□□□□□ -1.77
HMGB1P3-201ENST00000502802 WDR19Q8NEZ3 1342 aa4.01□□□□□ -1.77
HMGB1P3-201ENST00000502802 MYOM1P52179 1685 aa4.01□□□□□ -1.77
HMGB1P3-201ENST00000502802 TAF1LQ8IZX4 1826 aa4.01□□□□□ -1.77
HMGB1P3-201ENST00000502802 A0A1B0GU03 582 aa4.01□□□□□ -1.77
HMGB1P3-201ENST00000502802 SERTM2A0A1B0GWG4 89 aa4.01□□□□□ -1.77
HMGB1P3-201ENST00000502802 WWP2O00308 870 aa4.01□□□□□ -1.77
HMGB1P3-201ENST00000502802 STAMBPO95630 424 aa4.01□□□□□ -1.77
HMGB1P3-201ENST00000502802 FGF4P08620 206 aa4.01□□□□□ -1.77
HMGB1P3-201ENST00000502802 NPR2P20594 1047 aa4.01□□□□□ -1.77
HMGB1P3-201ENST00000502802 NTSP30990 170 aa4.01□□□□□ -1.77
HMGB1P3-201ENST00000502802 RFC4P35249 363 aa4.01□□□□□ -1.77
HMGB1P3-201ENST00000502802 MDH2P40926 338 aaKnown RBP4.01□□□□□ -1.77
HMGB1P3-201ENST00000502802 BCL2L1Q07817 233 aa4.01□□□□□ -1.77
HMGB1P3-201ENST00000502802 PPIL2Q13356 520 aa4.01□□□□□ -1.77
HMGB1P3-201ENST00000502802 OR5I1Q13606 314 aa4.01□□□□□ -1.77
HMGB1P3-201ENST00000502802 MICBQ29980 383 aa4.01□□□□□ -1.77
HMGB1P3-201ENST00000502802 PAGE2BQ5JRK9 111 aa4.01□□□□□ -1.77
HMGB1P3-201ENST00000502802 SPANXN2Q5MJ10 180 aa4.01□□□□□ -1.77
HMGB1P3-201ENST00000502802 SAMD4BQ5PRF9 694 aaKnown RBP4.01□□□□□ -1.77
HMGB1P3-201ENST00000502802 GPRC6AQ5T6X5 926 aa4.01□□□□□ -1.77
HMGB1P3-201ENST00000502802 OR2G6Q5TZ20 316 aa4.01□□□□□ -1.77
HMGB1P3-201ENST00000502802 LRRC74BQ6ZQY2 392 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms