RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 BRWD1Q9NSI6 2320 aa15.08■□□□□ 0
VCAN-204ENST00000502527 IGKV3D-11A0A0A0MRZ8 115 aa15.07■□□□□ 0
VCAN-204ENST00000502527 C4orf47A7E2U8 309 aa15.07■□□□□ 0
VCAN-204ENST00000502527 AIPO00170 330 aa15.07■□□□□ 0
VCAN-204ENST00000502527 PSMD9O00233 223 aa15.07■□□□□ 0
VCAN-204ENST00000502527 ITGA10O75578 1167 aa15.07■□□□□ 0
VCAN-204ENST00000502527 ZFPL1O95159 310 aa15.07■□□□□ 0
VCAN-204ENST00000502527 F13BP05160 661 aa15.07■□□□□ 0
VCAN-204ENST00000502527 RPL18Q07020 188 aaKnown RBP15.07■□□□□ 0
VCAN-204ENST00000502527 ELAVL1Q15717 326 aaKnown RBP15.07■□□□□ 0
VCAN-204ENST00000502527 C7orf57Q8NEG2 295 aa15.07■□□□□ 0
VCAN-204ENST00000502527 OR2T4Q8NH00 348 aa15.07■□□□□ 0
VCAN-204ENST00000502527 ZNF721Q8TF20 911 aa15.07■□□□□ 0
VCAN-204ENST00000502527 TSLPQ969D9 159 aa15.07■□□□□ 0
VCAN-204ENST00000502527 KTI12Q96EK9 354 aaPredicted RBP15.07■□□□□ 0
VCAN-204ENST00000502527 TSSK2Q96PF2 358 aa15.07■□□□□ 0
VCAN-204ENST00000502527 DERL3Q96Q80 235 aa15.07■□□□□ 0
VCAN-204ENST00000502527 MED28Q9H204 178 aa15.07■□□□□ 0
VCAN-204ENST00000502527 CHRDQ9H2X0 955 aa15.07■□□□□ 0
VCAN-204ENST00000502527 SPTBP11277 2137 aa15.07■□□□□ 0
VCAN-204ENST00000502527 TMEM72A0PK05 275 aa15.07■□□□□ 0
VCAN-204ENST00000502527 C7orf66A4D0T2 115 aa15.07■□□□□ 0
VCAN-204ENST00000502527 ACOD1A6NK06 481 aa15.07■□□□□ 0
VCAN-204ENST00000502527 A6NL46 340 aa15.07■□□□□ 0
VCAN-204ENST00000502527 IFITM5A6NNB3 132 aa15.07■□□□□ 0
VCAN-204ENST00000502527 PRR32B1ATL7 298 aa15.07■□□□□ 0
VCAN-204ENST00000502527 ICOSLGO75144 302 aa15.07■□□□□ 0
VCAN-204ENST00000502527 DDAH2O95865 285 aa15.07■□□□□ 0
VCAN-204ENST00000502527 TCRBP04435 133 aa15.07■□□□□ 0
VCAN-204ENST00000502527 EVI2BP34910 448 aa15.07■□□□□ 0
VCAN-204ENST00000502527 ARL4DP49703 201 aa15.07■□□□□ 0
VCAN-204ENST00000502527 SLC22A10Q63ZE4 541 aa15.07■□□□□ 0
VCAN-204ENST00000502527 ESPNLQ6ZVH7 1005 aa15.07■□□□□ 0
VCAN-204ENST00000502527 CMTM4Q8IZR5 234 aa15.07■□□□□ 0
VCAN-204ENST00000502527 SDR16C5Q8N3Y7 309 aa15.07■□□□□ 0
VCAN-204ENST00000502527 HSD17B8Q92506 261 aa15.07■□□□□ 0
VCAN-204ENST00000502527 SCMH1Q96GD3 660 aa15.07■□□□□ 0
VCAN-204ENST00000502527 GAL3ST4Q96RP7 486 aa15.07■□□□□ 0
VCAN-204ENST00000502527 CACNG6Q9BXT2 260 aa15.07■□□□□ 0
VCAN-204ENST00000502527 SRA1Q9HD15 236 aaKnown RBP15.07■□□□□ 0
VCAN-204ENST00000502527 HEATR5AQ86XA9 2040 aa15.06■□□□□ 0
VCAN-204ENST00000502527 TRAV6A0A075B6T7 132 aa15.06■□□□□ 0
VCAN-204ENST00000502527 H3BMH7 237 aa15.06■□□□□ 0
VCAN-204ENST00000502527 RENP00797 406 aa15.06■□□□□ 0
VCAN-204ENST00000502527 OR8G3PP0DMU2 310 aa15.06■□□□□ 0
VCAN-204ENST00000502527 IL12BP29460 328 aa15.06■□□□□ 0
VCAN-204ENST00000502527 HSD11B2P80365 405 aa15.06■□□□□ 0
VCAN-204ENST00000502527 DYRK1AQ13627 763 aa15.06■□□□□ 0
VCAN-204ENST00000502527 RNASE12Q5GAN4 147 aaKnown RBP15.06■□□□□ 0
VCAN-204ENST00000502527 GPR139Q6DWJ6 353 aa15.06■□□□□ 0
VCAN-204ENST00000502527 CDC20BQ86Y33 519 aa15.06■□□□□ 0
VCAN-204ENST00000502527 TIGD4Q8IY51 512 aa15.06■□□□□ 0
VCAN-204ENST00000502527 ZNF433Q8N7K0 673 aaPredicted RBP15.06■□□□□ 0
VCAN-204ENST00000502527 CADM4Q8NFZ8 388 aa15.06■□□□□ 0
VCAN-204ENST00000502527 SMIM4Q8WVI0 70 aa15.06■□□□□ 0
VCAN-204ENST00000502527 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.06■□□□□ 0
VCAN-204ENST00000502527 RGP1Q92546 391 aaPredicted RBP15.06■□□□□ 0
VCAN-204ENST00000502527 RNF166Q96A37 237 aaPredicted RBP15.06■□□□□ 0
VCAN-204ENST00000502527 TSPAN32Q96QS1 320 aa15.06■□□□□ 0
VCAN-204ENST00000502527 MNTQ99583 582 aa15.06■□□□□ 0
VCAN-204ENST00000502527 MRI1Q9BV20 369 aa15.06■□□□□ 0
VCAN-204ENST00000502527 SLC25A18Q9H1K4 315 aa15.06■□□□□ 0
VCAN-204ENST00000502527 PCED1AQ9H1Q7 454 aa15.06■□□□□ 0
VCAN-204ENST00000502527 FKRPQ9H9S5 495 aa15.06■□□□□ 0
VCAN-204ENST00000502527 RPP14O95059 124 aaKnown RBP15.05■□□□□ 0
VCAN-204ENST00000502527 CXCR1P25024 350 aa15.05■□□□□ 0
VCAN-204ENST00000502527 GIFP27352 417 aa15.05■□□□□ 0
VCAN-204ENST00000502527 MAPK3P27361 379 aaPredicted RBP15.05■□□□□ 0
VCAN-204ENST00000502527 ZNF117Q03924 483 aa15.05■□□□□ 0
VCAN-204ENST00000502527 ALKBH1Q13686 389 aaKnown RBP15.05■□□□□ 0
VCAN-204ENST00000502527 HES5Q5TA89 166 aa15.05■□□□□ 0
VCAN-204ENST00000502527 LIPNQ5VXI9 398 aa15.05■□□□□ 0
VCAN-204ENST00000502527 HLA-DQA1Q5Y7H0 255 aa15.05■□□□□ 0
VCAN-204ENST00000502527 PRR22Q8IZ63 422 aa15.05■□□□□ 0
VCAN-204ENST00000502527 CARFQ8N187 725 aa15.05■□□□□ 0
VCAN-204ENST00000502527 ZNF687Q8N1G0 1237 aa15.05■□□□□ 0
VCAN-204ENST00000502527 OR5AK2Q8NH90 309 aa15.05■□□□□ 0
VCAN-204ENST00000502527 TAAR8Q969N4 342 aa15.05■□□□□ 0
VCAN-204ENST00000502527 ZNF524Q96C55 264 aa15.05■□□□□ 0
VCAN-204ENST00000502527 GFI1Q99684 422 aa15.05■□□□□ 0
VCAN-204ENST00000502527 NUDT9Q9BW91 350 aa15.05■□□□□ 0
VCAN-204ENST00000502527 SLITRK2Q9H156 845 aa15.05■□□□□ 0
VCAN-204ENST00000502527 GHITMQ9H3K2 345 aa15.05■□□□□ 0
VCAN-204ENST00000502527 MRM2Q9UI43 246 aaKnown RBP15.05■□□□□ 0
VCAN-204ENST00000502527 ZNF346Q9UL40 294 aaKnown RBP15.05■□□□□ 0
VCAN-204ENST00000502527 V9GY05 133 aa15.05■□□□□ 0
VCAN-204ENST00000502527 TRABD2BA6NFA1 517 aa15.05■□□□□ -0
VCAN-204ENST00000502527 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.05■□□□□ -0
VCAN-204ENST00000502527 HCRTR2O43614 444 aa15.05■□□□□ -0
VCAN-204ENST00000502527 UPK3AO75631 287 aa15.05■□□□□ -0
VCAN-204ENST00000502527 STOMP27105 288 aa15.05■□□□□ -0
VCAN-204ENST00000502527 SNTB2Q13425 540 aaKnown RBP15.05■□□□□ -0
VCAN-204ENST00000502527 TDGQ13569 410 aa15.05■□□□□ -0
VCAN-204ENST00000502527 Q499Y3 187 aa15.05■□□□□ -0
VCAN-204ENST00000502527 MESTQ5EB52 335 aa15.05■□□□□ -0
VCAN-204ENST00000502527 SNAP47Q5SQN1 464 aa15.05■□□□□ -0
VCAN-204ENST00000502527 FAM199XQ6PEV8 388 aaPredicted RBP15.05■□□□□ -0
VCAN-204ENST00000502527 HYLS1Q96M11 299 aa15.05■□□□□ -0
VCAN-204ENST00000502527 STMN3Q9NZ72 180 aa15.05■□□□□ -0
VCAN-204ENST00000502527 AKAP7Q9P0M2 348 aaPredicted RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms