RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 KTI12Q96EK9 354 aaPredicted RBP12.31□□□□□ -0.44
GPC1-209ENST00000495100 C10orf90Q96M02 699 aa12.31□□□□□ -0.44
GPC1-209ENST00000495100 CRISPLD2Q9H0B8 497 aa12.31□□□□□ -0.44
GPC1-209ENST00000495100 ACAD8Q9UKU7 415 aa12.31□□□□□ -0.44
GPC1-209ENST00000495100 ESPL1Q14674 2120 aa12.31□□□□□ -0.44
GPC1-209ENST00000495100 H0YIG0 161 aa12.31□□□□□ -0.44
GPC1-209ENST00000495100 L7N2F9 121 aa12.31□□□□□ -0.44
GPC1-209ENST00000495100 ERVH48-1M5A8F1 160 aa12.31□□□□□ -0.44
GPC1-209ENST00000495100 ZNF780AO75290 641 aaPredicted RBP12.31□□□□□ -0.44
GPC1-209ENST00000495100 F10P00742 488 aa12.31□□□□□ -0.44
GPC1-209ENST00000495100 SPI1P17947 270 aa12.31□□□□□ -0.44
GPC1-209ENST00000495100 LCN1P31025 176 aa12.31□□□□□ -0.44
GPC1-209ENST00000495100 SFTPDP35247 375 aa12.31□□□□□ -0.44
GPC1-209ENST00000495100 DNASE1L1P49184 302 aa12.31□□□□□ -0.44
GPC1-209ENST00000495100 ADAM8P78325 824 aa12.31□□□□□ -0.44
GPC1-209ENST00000495100 TAF13Q15543 124 aa12.31□□□□□ -0.44
GPC1-209ENST00000495100 ZNF658BQ4V348 819 aaPredicted RBP12.31□□□□□ -0.44
GPC1-209ENST00000495100 OR2L13Q8N349 312 aa12.31□□□□□ -0.44
GPC1-209ENST00000495100 OR56B4Q8NH76 319 aa12.31□□□□□ -0.44
GPC1-209ENST00000495100 WDR89Q96FK6 387 aaPredicted RBP12.31□□□□□ -0.44
GPC1-209ENST00000495100 PTDSS2Q9BVG9 487 aa12.31□□□□□ -0.44
GPC1-209ENST00000495100 COMMD4Q9H0A8 199 aa12.31□□□□□ -0.44
GPC1-209ENST00000495100 KCNG2Q9UJ96 466 aa12.31□□□□□ -0.44
GPC1-209ENST00000495100 C13orf42A0A1B0GVH6 325 aa12.31□□□□□ -0.44
GPC1-209ENST00000495100 CDKN2AP42771 156 aaKnown RBP12.31□□□□□ -0.44
GPC1-209ENST00000495100 PLCXD2Q0VAA5 305 aa12.31□□□□□ -0.44
GPC1-209ENST00000495100 HYAL1Q12794 435 aa12.31□□□□□ -0.44
GPC1-209ENST00000495100 PYHIN1Q6K0P9 492 aa12.31□□□□□ -0.44
GPC1-209ENST00000495100 NHLRC1Q6VVB1 395 aa12.31□□□□□ -0.44
GPC1-209ENST00000495100 RASGRP3Q8IV61 690 aa12.31□□□□□ -0.44
GPC1-209ENST00000495100 OR52N1Q8NH53 320 aa12.31□□□□□ -0.44
GPC1-209ENST00000495100 PPP1R3EQ9H7J1 279 aa12.31□□□□□ -0.44
GPC1-209ENST00000495100 FBXL2Q9UKC9 423 aa12.31□□□□□ -0.44
GPC1-209ENST00000495100 A0A1B0GVI7 797 aa12.3□□□□□ -0.44
GPC1-209ENST00000495100 ARRDC5A6NEK1 342 aa12.3□□□□□ -0.44
GPC1-209ENST00000495100 CCSO14618 274 aa12.3□□□□□ -0.44
GPC1-209ENST00000495100 ITGA10O75578 1167 aa12.3□□□□□ -0.44
GPC1-209ENST00000495100 GABRG2P18507 467 aa12.3□□□□□ -0.44
GPC1-209ENST00000495100 OR1D5P58170 312 aa12.3□□□□□ -0.44
GPC1-209ENST00000495100 TMEM44Q2T9K0 475 aa12.3□□□□□ -0.44
GPC1-209ENST00000495100 SLC6A19Q695T7 634 aa12.3□□□□□ -0.44
GPC1-209ENST00000495100 OR5D18Q8NGL1 313 aa12.3□□□□□ -0.44
GPC1-209ENST00000495100 ELOVL3Q9HB03 270 aa12.3□□□□□ -0.44
GPC1-209ENST00000495100 FSCN3Q9NQT6 498 aa12.3□□□□□ -0.44
GPC1-209ENST00000495100 UBE2QL1A1L167 161 aa12.3□□□□□ -0.44
GPC1-209ENST00000495100 BHLHE40O14503 412 aa12.3□□□□□ -0.44
GPC1-209ENST00000495100 EEF1A1P68104 462 aaKnown RBP12.3□□□□□ -0.44
GPC1-209ENST00000495100 PRICKLE4Q2TBC4 344 aa12.3□□□□□ -0.44
GPC1-209ENST00000495100 C1QTNF12Q5T7M4 302 aa12.3□□□□□ -0.44
GPC1-209ENST00000495100 CHRDL2Q6WN34 429 aa12.3□□□□□ -0.44
GPC1-209ENST00000495100 MAMSTRQ6ZN01 415 aa12.3□□□□□ -0.44
GPC1-209ENST00000495100 BCORP1Q8N888 145 aa12.3□□□□□ -0.44
GPC1-209ENST00000495100 ACBD4Q8NC06 268 aa12.3□□□□□ -0.44
GPC1-209ENST00000495100 BAHD1Q8TBE0 780 aaPredicted RBP12.3□□□□□ -0.44
GPC1-209ENST00000495100 ZNF350Q9GZX5 532 aa12.3□□□□□ -0.44
GPC1-209ENST00000495100 NOX3Q9HBY0 568 aa12.3□□□□□ -0.44
GPC1-209ENST00000495100 MCCC2Q9HCC0 563 aa12.3□□□□□ -0.44
GPC1-209ENST00000495100 SERINC4A6NH21 518 aa12.29□□□□□ -0.44
GPC1-209ENST00000495100 CCDC85CA6NKD9 419 aa12.29□□□□□ -0.44
GPC1-209ENST00000495100 BRINP1O60477 761 aa12.29□□□□□ -0.44
GPC1-209ENST00000495100 RENP00797 406 aa12.29□□□□□ -0.44
GPC1-209ENST00000495100 PLA2G7Q13093 441 aa12.29□□□□□ -0.44
GPC1-209ENST00000495100 ST3GAL2Q16842 350 aa12.29□□□□□ -0.44
GPC1-209ENST00000495100 LINC00299Q6ZSB3 139 aa12.29□□□□□ -0.44
GPC1-209ENST00000495100 MS4A15Q8N5U1 240 aa12.29□□□□□ -0.44
GPC1-209ENST00000495100 C19orf47Q8N9M1 422 aaKnown RBP12.29□□□□□ -0.44
GPC1-209ENST00000495100 GPER1Q99527 375 aa12.29□□□□□ -0.44
GPC1-209ENST00000495100 ZMIZ1Q9ULJ6 1067 aa12.29□□□□□ -0.44
GPC1-209ENST00000495100 V9GY05 133 aa12.29□□□□□ -0.44
GPC1-209ENST00000495100 EPXP11678 715 aa12.29□□□□□ -0.44
GPC1-209ENST00000495100 CDK2P24941 298 aa12.29□□□□□ -0.44
GPC1-209ENST00000495100 LPAL2Q16609 132 aa12.29□□□□□ -0.44
GPC1-209ENST00000495100 HEPHL1Q6MZM0 1159 aa12.29□□□□□ -0.44
GPC1-209ENST00000495100 ZNF550Q7Z398 422 aa12.29□□□□□ -0.44
GPC1-209ENST00000495100 PLCZ1Q86YW0 608 aa12.29□□□□□ -0.44
GPC1-209ENST00000495100 GLB1L2Q8IW92 636 aa12.29□□□□□ -0.44
GPC1-209ENST00000495100 ADAMTS18Q8TE60 1221 aa12.29□□□□□ -0.44
GPC1-209ENST00000495100 SLC6A7Q99884 636 aa12.29□□□□□ -0.44
GPC1-209ENST00000495100 PDE7BQ9NP56 450 aa12.29□□□□□ -0.44
GPC1-209ENST00000495100 PCDHGB7Q9Y5F8 929 aa12.29□□□□□ -0.44
GPC1-209ENST00000495100 SPTAN1Q13813 2472 aaKnown RBP12.29□□□□□ -0.44
GPC1-209ENST00000495100 CACNA1HO95180 2353 aa12.29□□□□□ -0.44
GPC1-209ENST00000495100 IGHV5-51A0A0C4DH38 117 aa12.29□□□□□ -0.44
GPC1-209ENST00000495100 LGALS8O00214 317 aa12.29□□□□□ -0.44
GPC1-209ENST00000495100 GOSR2O14653 212 aa12.29□□□□□ -0.44
GPC1-209ENST00000495100 CHP2O43745 196 aa12.29□□□□□ -0.44
GPC1-209ENST00000495100 KRT33AO76009 404 aa12.29□□□□□ -0.44
GPC1-209ENST00000495100 RPS15P62841 145 aaKnown RBP12.29□□□□□ -0.44
GPC1-209ENST00000495100 TEKQ02763 1124 aa12.29□□□□□ -0.44
GPC1-209ENST00000495100 ZNF248Q8NDW4 579 aa12.29□□□□□ -0.44
GPC1-209ENST00000495100 OR11H7Q8NGC8 314 aa12.29□□□□□ -0.44
GPC1-209ENST00000495100 C8orf44Q96CB5 159 aa12.29□□□□□ -0.44
GPC1-209ENST00000495100 FOXQ1Q9C009 403 aa12.29□□□□□ -0.44
GPC1-209ENST00000495100 FANCMQ8IYD8 2048 aa12.29□□□□□ -0.44
GPC1-209ENST00000495100 KCNAB3O43448 404 aa12.28□□□□□ -0.44
GPC1-209ENST00000495100 ICMTO60725 284 aa12.28□□□□□ -0.44
GPC1-209ENST00000495100 SERPINA3P01011 423 aa12.28□□□□□ -0.44
GPC1-209ENST00000495100 ZNF250P15622 560 aa12.28□□□□□ -0.44
GPC1-209ENST00000495100 OR3A3P47888 321 aa12.28□□□□□ -0.44
GPC1-209ENST00000495100 AKR1C2P52895 323 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms