RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 SLC7A2P52569 658 aa15.49■□□□□ 0.07
HDAC4-211ENST00000494800 FOXG1P55316 489 aaPredicted RBP15.49■□□□□ 0.07
HDAC4-211ENST00000494800 UBE2NP61088 152 aaKnown RBP15.49■□□□□ 0.07
HDAC4-211ENST00000494800 POU3F1Q03052 451 aaPredicted RBP15.49■□□□□ 0.07
HDAC4-211ENST00000494800 ZNF672Q499Z4 452 aaPredicted RBP15.49■□□□□ 0.07
HDAC4-211ENST00000494800 SEZ6L2Q6UXD5 910 aa15.49■□□□□ 0.07
HDAC4-211ENST00000494800 SLC15A3Q8IY34 581 aa15.49■□□□□ 0.07
HDAC4-211ENST00000494800 PIAS4Q8N2W9 510 aaPredicted RBP15.49■□□□□ 0.07
HDAC4-211ENST00000494800 OR5J2Q8NH18 312 aa15.49■□□□□ 0.07
HDAC4-211ENST00000494800 MOGAT1Q96PD6 335 aa15.49■□□□□ 0.07
HDAC4-211ENST00000494800 ALG2Q9H553 416 aa15.49■□□□□ 0.07
HDAC4-211ENST00000494800 FKRPQ9H9S5 495 aa15.49■□□□□ 0.07
HDAC4-211ENST00000494800 MOV10Q9HCE1 1003 aaKnown RBP15.49■□□□□ 0.07
HDAC4-211ENST00000494800 B3GAT2Q9NPZ5 323 aa15.49■□□□□ 0.07
HDAC4-211ENST00000494800 NANSQ9NR45 359 aa15.49■□□□□ 0.07
HDAC4-211ENST00000494800 POU2F3Q9UKI9 436 aa15.49■□□□□ 0.07
HDAC4-211ENST00000494800 USP22Q9UPT9 525 aa15.49■□□□□ 0.07
HDAC4-211ENST00000494800 ZNF726A6NNF4 738 aa15.48■□□□□ 0.07
HDAC4-211ENST00000494800 MS4A18H0YCH9 400 aa15.48■□□□□ 0.07
HDAC4-211ENST00000494800 M0R1B8 84 aa15.48■□□□□ 0.07
HDAC4-211ENST00000494800 KPNA4O00629 521 aaPredicted RBP15.48■□□□□ 0.07
HDAC4-211ENST00000494800 ADORA3P0DMS8 318 aa15.48■□□□□ 0.07
HDAC4-211ENST00000494800 THRBP10828 461 aa15.48■□□□□ 0.07
HDAC4-211ENST00000494800 UMPSP11172 480 aa15.48■□□□□ 0.07
HDAC4-211ENST00000494800 RBM34P42696 430 aaKnown RBP15.48■□□□□ 0.07
HDAC4-211ENST00000494800 SELENOWP63302 87 aa15.48■□□□□ 0.07
HDAC4-211ENST00000494800 ADAM8P78325 824 aa15.48■□□□□ 0.07
HDAC4-211ENST00000494800 ROR2Q01974 943 aaKnown RBP15.48■□□□□ 0.07
HDAC4-211ENST00000494800 MS4A18Q3C1V0 323 aa15.48■□□□□ 0.07
HDAC4-211ENST00000494800 SLC22A25Q6T423 547 aa15.48■□□□□ 0.07
HDAC4-211ENST00000494800 PXKQ7Z7A4 578 aa15.48■□□□□ 0.07
HDAC4-211ENST00000494800 TREML1Q86YW5 311 aa15.48■□□□□ 0.07
HDAC4-211ENST00000494800 KBTBD8Q8NFY9 601 aa15.48■□□□□ 0.07
HDAC4-211ENST00000494800 OR1K1Q8NGR3 316 aa15.48■□□□□ 0.07
HDAC4-211ENST00000494800 BOD1Q96IK1 185 aa15.48■□□□□ 0.07
HDAC4-211ENST00000494800 MYLK2Q9H1R3 596 aa15.48■□□□□ 0.07
HDAC4-211ENST00000494800 NPAP1Q9NZP6 1156 aa15.48■□□□□ 0.07
HDAC4-211ENST00000494800 ZNF229Q9UJW7 825 aa15.48■□□□□ 0.07
HDAC4-211ENST00000494800 CXCR6O00574 342 aa15.47■□□□□ 0.07
HDAC4-211ENST00000494800 PLPP3O14495 311 aa15.47■□□□□ 0.07
HDAC4-211ENST00000494800 DYNC1I1O14576 645 aa15.47■□□□□ 0.07
HDAC4-211ENST00000494800 TRAF3IP2O43734 574 aaPredicted RBP15.47■□□□□ 0.07
HDAC4-211ENST00000494800 GMNNO75496 209 aa15.47■□□□□ 0.07
HDAC4-211ENST00000494800 UPK3AO75631 287 aa15.47■□□□□ 0.07
HDAC4-211ENST00000494800 ZNF432O94892 652 aa15.47■□□□□ 0.07
HDAC4-211ENST00000494800 CH25HO95992 272 aa15.47■□□□□ 0.07
HDAC4-211ENST00000494800 TNFRSF1BP20333 461 aa15.47■□□□□ 0.07
HDAC4-211ENST00000494800 CD40P25942 277 aa15.47■□□□□ 0.07
HDAC4-211ENST00000494800 OR1E2P47887 323 aa15.47■□□□□ 0.07
HDAC4-211ENST00000494800 CDH11P55287 796 aa15.47■□□□□ 0.07
HDAC4-211ENST00000494800 RPS4XP62701 263 aaKnown RBP15.47■□□□□ 0.07
HDAC4-211ENST00000494800 LTBQ06643 244 aa15.47■□□□□ 0.07
HDAC4-211ENST00000494800 ZNF74Q16587 644 aa15.47■□□□□ 0.07
HDAC4-211ENST00000494800 FREM1Q5H8C1 2179 aa15.47■□□□□ 0.07
HDAC4-211ENST00000494800 ANKRD16Q6P6B7 361 aa15.47■□□□□ 0.07
HDAC4-211ENST00000494800 WDR88Q6ZMY6 472 aa15.47■□□□□ 0.07
HDAC4-211ENST00000494800 SMAP2Q8WU79 429 aaPredicted RBP15.47■□□□□ 0.07
HDAC4-211ENST00000494800 PERPQ96FX8 193 aa15.47■□□□□ 0.07
HDAC4-211ENST00000494800 HS6ST2Q96MM7 605 aa15.47■□□□□ 0.07
HDAC4-211ENST00000494800 OR2M2Q96R28 347 aa15.47■□□□□ 0.07
HDAC4-211ENST00000494800 KCTD14Q9BQ13 255 aaPredicted RBP15.47■□□□□ 0.07
HDAC4-211ENST00000494800 ZNF426Q9BUY5 554 aa15.47■□□□□ 0.07
HDAC4-211ENST00000494800 SPAG4Q9NPE6 437 aa15.47■□□□□ 0.07
HDAC4-211ENST00000494800 CISD1Q9NZ45 108 aaKnown RBP15.47■□□□□ 0.07
HDAC4-211ENST00000494800 RIMS3Q9UJD0 308 aa15.47■□□□□ 0.07
HDAC4-211ENST00000494800 LAMP3Q9UQV4 416 aa15.47■□□□□ 0.07
HDAC4-211ENST00000494800 CELSR1Q9NYQ6 3014 aa15.46■□□□□ 0.07
HDAC4-211ENST00000494800 LRRN3E7EW58 273 aa15.46■□□□□ 0.07
HDAC4-211ENST00000494800 RPL36A-HNRNPH2H7BZ11 118 aa15.46■□□□□ 0.07
HDAC4-211ENST00000494800 NME4O00746 187 aa15.46■□□□□ 0.07
HDAC4-211ENST00000494800 RNF13O43567 381 aa15.46■□□□□ 0.07
HDAC4-211ENST00000494800 SERPINI2O75830 405 aa15.46■□□□□ 0.07
HDAC4-211ENST00000494800 DCTN3O75935 186 aa15.46■□□□□ 0.07
HDAC4-211ENST00000494800 LYPD3O95274 346 aa15.46■□□□□ 0.07
HDAC4-211ENST00000494800 ZNF682O95780 498 aa15.46■□□□□ 0.07
HDAC4-211ENST00000494800 THY1P04216 161 aa15.46■□□□□ 0.07
HDAC4-211ENST00000494800 IFNW1P05000 195 aa15.46■□□□□ 0.07
HDAC4-211ENST00000494800 HOXB1P14653 301 aaPredicted RBP15.46■□□□□ 0.07
HDAC4-211ENST00000494800 PSME3P61289 254 aa15.46■□□□□ 0.07
HDAC4-211ENST00000494800 LGALS3BPQ08380 585 aa15.46■□□□□ 0.07
HDAC4-211ENST00000494800 ST3GAL3Q11203 375 aa15.46■□□□□ 0.07
HDAC4-211ENST00000494800 TBRG1Q3YBR2 411 aa15.46■□□□□ 0.07
HDAC4-211ENST00000494800 HIKESHIQ53FT3 197 aa15.46■□□□□ 0.07
HDAC4-211ENST00000494800 Q5PR19 223 aa15.46■□□□□ 0.07
HDAC4-211ENST00000494800 C8orf82Q6P1X6 216 aaPredicted RBP15.46■□□□□ 0.07
HDAC4-211ENST00000494800 WDR31Q8NA23 367 aa15.46■□□□□ 0.07
HDAC4-211ENST00000494800 MAGEE2Q8TD90 523 aaPredicted RBP15.46■□□□□ 0.07
HDAC4-211ENST00000494800 GTPBP3Q969Y2 492 aaKnown RBP15.46■□□□□ 0.07
HDAC4-211ENST00000494800 LRR1Q96L50 414 aa15.46■□□□□ 0.07
HDAC4-211ENST00000494800 ADAD1Q96M93 576 aaKnown RBP15.46■□□□□ 0.07
HDAC4-211ENST00000494800 KCNS3Q9BQ31 491 aa15.46■□□□□ 0.07
HDAC4-211ENST00000494800 TMUB1Q9BVT8 246 aa15.46■□□□□ 0.07
HDAC4-211ENST00000494800 C1QTNF6Q9BXI9 259 aa15.46■□□□□ 0.07
HDAC4-211ENST00000494800 GSX2Q9BZM3 304 aa15.46■□□□□ 0.07
HDAC4-211ENST00000494800 ARL2BPQ9Y2Y0 163 aa15.46■□□□□ 0.07
HDAC4-211ENST00000494800 AKAP6Q13023 2319 aa15.46■□□□□ 0.07
HDAC4-211ENST00000494800 C11orf98E9PRG8 122 aa15.45■□□□□ 0.06
HDAC4-211ENST00000494800 SHOX2O60902 331 aaPredicted RBP15.45■□□□□ 0.06
HDAC4-211ENST00000494800 HPRP00739 348 aa15.45■□□□□ 0.06
HDAC4-211ENST00000494800 MT-ND1P03886 318 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms