RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 ALPK2Q86TB3 2170 aa7.73□□□□□ -1.17
ITGB1-217ENST00000494395 LOC102725191A0A1B0GVB3 256 aa7.73□□□□□ -1.17
ITGB1-217ENST00000494395 LRRN3E7EW58 273 aa7.73□□□□□ -1.17
ITGB1-217ENST00000494395 FFAR1O14842 300 aa7.73□□□□□ -1.17
ITGB1-217ENST00000494395 PRSS23O95084 383 aa7.73□□□□□ -1.17
ITGB1-217ENST00000494395 VAMP5O95183 116 aa7.73□□□□□ -1.17
ITGB1-217ENST00000494395 OR5F1O95221 314 aa7.73□□□□□ -1.17
ITGB1-217ENST00000494395 ADAP00813 363 aa7.73□□□□□ -1.17
ITGB1-217ENST00000494395 NCK1P16333 377 aa7.73□□□□□ -1.17
ITGB1-217ENST00000494395 RAB6AP20340 208 aa7.73□□□□□ -1.17
ITGB1-217ENST00000494395 CRYGSP22914 178 aa7.73□□□□□ -1.17
ITGB1-217ENST00000494395 IGHV1-2P23083 117 aa7.73□□□□□ -1.17
ITGB1-217ENST00000494395 GRPRP30550 384 aa7.73□□□□□ -1.17
ITGB1-217ENST00000494395 OR1E2P47887 323 aa7.73□□□□□ -1.17
ITGB1-217ENST00000494395 FOXG1P55316 489 aaPredicted RBP7.73□□□□□ -1.17
ITGB1-217ENST00000494395 SLC25A3Q00325 362 aa7.73□□□□□ -1.17
ITGB1-217ENST00000494395 ITGADQ13349 1161 aa7.73□□□□□ -1.17
ITGB1-217ENST00000494395 P2RY6Q15077 328 aa7.73□□□□□ -1.17
ITGB1-217ENST00000494395 GKAP1Q5VSY0 366 aaPredicted RBP7.73□□□□□ -1.17
ITGB1-217ENST00000494395 FBXW9Q5XUX1 488 aa7.73□□□□□ -1.17
ITGB1-217ENST00000494395 CDPF1Q6NVV7 123 aa7.73□□□□□ -1.17
ITGB1-217ENST00000494395 CREB3L2Q70SY1 520 aa7.73□□□□□ -1.17
ITGB1-217ENST00000494395 EPHX4Q8IUS5 362 aa7.73□□□□□ -1.17
ITGB1-217ENST00000494395 NKAIN4Q8IVV8 208 aa7.73□□□□□ -1.17
ITGB1-217ENST00000494395 ZNF433Q8N7K0 673 aaPredicted RBP7.73□□□□□ -1.17
ITGB1-217ENST00000494395 CCDC197Q8NCU1 140 aa7.73□□□□□ -1.17
ITGB1-217ENST00000494395 MPP4Q96JB8 637 aa7.73□□□□□ -1.17
ITGB1-217ENST00000494395 EPYCQ99645 322 aa7.73□□□□□ -1.17
ITGB1-217ENST00000494395 KCTD14Q9BQ13 255 aaPredicted RBP7.73□□□□□ -1.17
ITGB1-217ENST00000494395 AMBRA1Q9C0C7 1298 aa7.73□□□□□ -1.17
ITGB1-217ENST00000494395 FANCFQ9NPI8 374 aa7.73□□□□□ -1.17
ITGB1-217ENST00000494395 MEPEQ9NQ76 525 aaPredicted RBP7.73□□□□□ -1.17
ITGB1-217ENST00000494395 SLC7A10Q9NS82 523 aa7.73□□□□□ -1.17
ITGB1-217ENST00000494395 NDRG3Q9UGV2 375 aa7.73□□□□□ -1.17
ITGB1-217ENST00000494395 A4GNTQ9UNA3 340 aa7.73□□□□□ -1.17
ITGB1-217ENST00000494395 B3GALT5Q9Y2C3 310 aa7.73□□□□□ -1.17
ITGB1-217ENST00000494395 SNX13Q9Y5W8 968 aa7.73□□□□□ -1.17
ITGB1-217ENST00000494395 LRBAP50851 2863 aa7.73□□□□□ -1.17
ITGB1-217ENST00000494395 AKAP9Q99996 3911 aa7.73□□□□□ -1.17
ITGB1-217ENST00000494395 NOTCH2Q04721 2471 aa7.73□□□□□ -1.17
ITGB1-217ENST00000494395 CSMD1Q96PZ7 3565 aa7.72□□□□□ -1.17
ITGB1-217ENST00000494395 MS4A18H0YCH9 400 aa7.72□□□□□ -1.17
ITGB1-217ENST00000494395 TRAF3IP2O43734 574 aaPredicted RBP7.72□□□□□ -1.17
ITGB1-217ENST00000494395 MRPL33O75394 65 aaKnown RBP7.72□□□□□ -1.17
ITGB1-217ENST00000494395 LYZL6O75951 148 aa7.72□□□□□ -1.17
ITGB1-217ENST00000494395 ZNF432O94892 652 aa7.72□□□□□ -1.17
ITGB1-217ENST00000494395 HPRP00739 348 aa7.72□□□□□ -1.17
ITGB1-217ENST00000494395 MT-ATP6P00846 226 aa7.72□□□□□ -1.17
ITGB1-217ENST00000494395 SERPINA1P01009 418 aa7.72□□□□□ -1.17
ITGB1-217ENST00000494395 IGF2P01344 180 aa7.72□□□□□ -1.17
ITGB1-217ENST00000494395 SEMG1P04279 462 aa7.72□□□□□ -1.17
ITGB1-217ENST00000494395 ITGA5P08648 1049 aa7.72□□□□□ -1.17
ITGB1-217ENST00000494395 THRBP10828 461 aa7.72□□□□□ -1.17
ITGB1-217ENST00000494395 PPP3CBP16298 524 aa7.72□□□□□ -1.17
ITGB1-217ENST00000494395 CBLP22681 906 aa7.72□□□□□ -1.17
ITGB1-217ENST00000494395 UGT2B15P54855 530 aa7.72□□□□□ -1.17
ITGB1-217ENST00000494395 PIN1Q13526 163 aaPredicted RBP7.72□□□□□ -1.17
ITGB1-217ENST00000494395 MFSD13AQ14CX5 517 aa7.72□□□□□ -1.17
ITGB1-217ENST00000494395 TSC22D1Q15714 1073 aa7.72□□□□□ -1.17
ITGB1-217ENST00000494395 ZNF74Q16587 644 aa7.72□□□□□ -1.17
ITGB1-217ENST00000494395 MS4A18Q3C1V0 323 aa7.72□□□□□ -1.17
ITGB1-217ENST00000494395 IQCCQ4KMZ1 466 aa7.72□□□□□ -1.17
ITGB1-217ENST00000494395 TSPO2Q5TGU0 170 aa7.72□□□□□ -1.17
ITGB1-217ENST00000494395 TMEM225Q6GV28 225 aa7.72□□□□□ -1.17
ITGB1-217ENST00000494395 CASP12Q6UXS9 341 aa7.72□□□□□ -1.17
ITGB1-217ENST00000494395 DEF8Q6ZN54 512 aa7.72□□□□□ -1.17
ITGB1-217ENST00000494395 H1FNTQ75WM6 255 aaPredicted RBP7.72□□□□□ -1.17
ITGB1-217ENST00000494395 SLC46A3Q7Z3Q1 461 aa7.72□□□□□ -1.17
ITGB1-217ENST00000494395 KDM8Q8N371 416 aa7.72□□□□□ -1.17
ITGB1-217ENST00000494395 RNF148Q8N7C7 305 aa7.72□□□□□ -1.17
ITGB1-217ENST00000494395 FAM86B1Q8N7N1 296 aa7.72□□□□□ -1.17
ITGB1-217ENST00000494395 SCAIQ8N9R8 606 aa7.72□□□□□ -1.17
ITGB1-217ENST00000494395 FAM156AQ8NDB6 213 aa7.72□□□□□ -1.17
ITGB1-217ENST00000494395 RBM15BQ8NDT2 890 aaKnown RBP7.72□□□□□ -1.17
ITGB1-217ENST00000494395 STEAP2Q8NFT2 490 aa7.72□□□□□ -1.17
ITGB1-217ENST00000494395 GEMIN6Q8WXD5 167 aaKnown RBP7.72□□□□□ -1.17
ITGB1-217ENST00000494395 APH1AQ96BI3 265 aa7.72□□□□□ -1.17
ITGB1-217ENST00000494395 SLC25A36Q96CQ1 311 aa7.72□□□□□ -1.17
ITGB1-217ENST00000494395 BOD1Q96IK1 185 aa7.72□□□□□ -1.17
ITGB1-217ENST00000494395 FAM46AQ96IP4 442 aaKnown RBP7.72□□□□□ -1.17
ITGB1-217ENST00000494395 TPD52L3Q96J77 140 aa7.72□□□□□ -1.17
ITGB1-217ENST00000494395 PRRC1Q96M27 445 aa7.72□□□□□ -1.17
ITGB1-217ENST00000494395 OXGR1Q96P68 337 aa7.72□□□□□ -1.17
ITGB1-217ENST00000494395 MED18Q9BUE0 208 aa7.72□□□□□ -1.17
ITGB1-217ENST00000494395 HDHD5Q9BXW7 423 aa7.72□□□□□ -1.17
ITGB1-217ENST00000494395 SLC19A3Q9BZV2 496 aa7.72□□□□□ -1.17
ITGB1-217ENST00000494395 ACTR6Q9GZN1 396 aa7.72□□□□□ -1.17
ITGB1-217ENST00000494395 PLEKHF2Q9H8W4 249 aa7.72□□□□□ -1.17
ITGB1-217ENST00000494395 GORASP2Q9H8Y8 452 aa7.72□□□□□ -1.17
ITGB1-217ENST00000494395 MAN2C1Q9NTJ4 1040 aa7.72□□□□□ -1.17
ITGB1-217ENST00000494395 DCAF13Q9NV06 445 aaKnown RBP7.72□□□□□ -1.17
ITGB1-217ENST00000494395 MRPL39Q9NYK5 338 aaKnown RBP7.72□□□□□ -1.17
ITGB1-217ENST00000494395 ADA2Q9NZK5 511 aa7.72□□□□□ -1.17
ITGB1-217ENST00000494395 SELENONQ9NZV5 590 aa7.72□□□□□ -1.17
ITGB1-217ENST00000494395 RIMS3Q9UJD0 308 aa7.72□□□□□ -1.17
ITGB1-217ENST00000494395 TACC2O95359 2948 aa7.72□□□□□ -1.17
ITGB1-217ENST00000494395 TEX15Q9BXT5 2789 aa7.72□□□□□ -1.17
ITGB1-217ENST00000494395 J3KTA2 159 aa7.71□□□□□ -1.18
ITGB1-217ENST00000494395 PLPP3O14495 311 aa7.71□□□□□ -1.18
ITGB1-217ENST00000494395 ARPC2O15144 300 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms