RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 KIF25Q9UIL4 384 aa10.51□□□□□ -0.73
RFC4-214ENST00000494047 MMP17Q9ULZ9 603 aa10.51□□□□□ -0.73
RFC4-214ENST00000494047 IER3IP1Q9Y5U9 82 aa10.51□□□□□ -0.73
RFC4-214ENST00000494047 FKBP7Q9Y680 259 aa10.51□□□□□ -0.73
RFC4-214ENST00000494047 GVINP1Q7Z2Y8 2422 aa10.5□□□□□ -0.73
RFC4-214ENST00000494047 CENPVL1A0A0U1RR11 272 aa10.5□□□□□ -0.73
RFC4-214ENST00000494047 M0R233 179 aa10.5□□□□□ -0.73
RFC4-214ENST00000494047 SULT1C2O00338 296 aa10.5□□□□□ -0.73
RFC4-214ENST00000494047 SCDO00767 359 aa10.5□□□□□ -0.73
RFC4-214ENST00000494047 ZNF254O75437 659 aa10.5□□□□□ -0.73
RFC4-214ENST00000494047 KHDRBS3O75525 346 aaKnown RBP10.5□□□□□ -0.73
RFC4-214ENST00000494047 KLF8O95600 359 aaPredicted RBP10.5□□□□□ -0.73
RFC4-214ENST00000494047 CRYZL1O95825 349 aa10.5□□□□□ -0.73
RFC4-214ENST00000494047 MT-ATP6P00846 226 aa10.5□□□□□ -0.73
RFC4-214ENST00000494047 IGLV3-19P01714 112 aa10.5□□□□□ -0.73
RFC4-214ENST00000494047 HIST1H2ABP04908 130 aa10.5□□□□□ -0.73
RFC4-214ENST00000494047 EMDP50402 254 aa10.5□□□□□ -0.73
RFC4-214ENST00000494047 AGFG1P52594 562 aaKnown RBP10.5□□□□□ -0.73
RFC4-214ENST00000494047 OR10A3P58181 314 aa10.5□□□□□ -0.73
RFC4-214ENST00000494047 ACTBP60709 375 aa10.5□□□□□ -0.73
RFC4-214ENST00000494047 GMFBP60983 142 aa10.5□□□□□ -0.73
RFC4-214ENST00000494047 ACTG1P63261 375 aa10.5□□□□□ -0.73
RFC4-214ENST00000494047 RBMS2Q15434 407 aaKnown RBP10.5□□□□□ -0.73
RFC4-214ENST00000494047 PRTGQ2VWP7 1150 aa10.5□□□□□ -0.73
RFC4-214ENST00000494047 TP53I3Q53FA7 332 aa10.5□□□□□ -0.73
RFC4-214ENST00000494047 TMEM69Q5SWH9 247 aa10.5□□□□□ -0.73
RFC4-214ENST00000494047 LAMTOR1Q6IAA8 161 aa10.5□□□□□ -0.73
RFC4-214ENST00000494047 FDX2Q6P4F2 183 aa10.5□□□□□ -0.73
RFC4-214ENST00000494047 IDO2Q6ZQW0 420 aa10.5□□□□□ -0.73
RFC4-214ENST00000494047 HIST3H2AQ7L7L0 130 aa10.5□□□□□ -0.73
RFC4-214ENST00000494047 UXS1Q8NBZ7 420 aa10.5□□□□□ -0.73
RFC4-214ENST00000494047 SDR9C7Q8NEX9 313 aa10.5□□□□□ -0.73
RFC4-214ENST00000494047 OR4K13Q8NH42 304 aa10.5□□□□□ -0.73
RFC4-214ENST00000494047 OR5AK2Q8NH90 309 aa10.5□□□□□ -0.73
RFC4-214ENST00000494047 HIST1H2ACQ93077 130 aa10.5□□□□□ -0.73
RFC4-214ENST00000494047 DACT3Q96B18 629 aaPredicted RBP10.5□□□□□ -0.73
RFC4-214ENST00000494047 ZMYND19Q96E35 227 aaPredicted RBP10.5□□□□□ -0.73
RFC4-214ENST00000494047 BMFQ96LC9 184 aa10.5□□□□□ -0.73
RFC4-214ENST00000494047 KLHL15Q96M94 604 aa10.5□□□□□ -0.73
RFC4-214ENST00000494047 DERL3Q96Q80 235 aa10.5□□□□□ -0.73
RFC4-214ENST00000494047 SLCO5A1Q9H2Y9 848 aa10.5□□□□□ -0.73
RFC4-214ENST00000494047 FKRPQ9H9S5 495 aa10.5□□□□□ -0.73
RFC4-214ENST00000494047 ZFP64Q9NPA5 681 aa10.5□□□□□ -0.73
RFC4-214ENST00000494047 MED9Q9NWA0 146 aa10.5□□□□□ -0.73
RFC4-214ENST00000494047 TAS2R5Q9NYW4 299 aa10.5□□□□□ -0.73
RFC4-214ENST00000494047 MYO15AQ9UKN7 3530 aa10.49□□□□□ -0.73
RFC4-214ENST00000494047 TRAV6A0A075B6T7 132 aa10.49□□□□□ -0.73
RFC4-214ENST00000494047 LOC105369274A0A096LPK9 316 aa10.49□□□□□ -0.73
RFC4-214ENST00000494047 TRBV5-5A0A0J9YX44 114 aa10.49□□□□□ -0.73
RFC4-214ENST00000494047 A0A1W2PQ72 361 aa10.49□□□□□ -0.73
RFC4-214ENST00000494047 ANKRD20A5PA0PJZ0 165 aa10.49□□□□□ -0.73
RFC4-214ENST00000494047 LILRA5A6NI73 299 aa10.49□□□□□ -0.73
RFC4-214ENST00000494047 ANXA2P2A6NMY6 339 aa10.49□□□□□ -0.73
RFC4-214ENST00000494047 E9PI62 339 aa10.49□□□□□ -0.73
RFC4-214ENST00000494047 ZNF593O00488 134 aaPredicted RBP10.49□□□□□ -0.73
RFC4-214ENST00000494047 CDC40O60508 579 aaKnown RBP eCLIP10.49□□□□□ -0.73
RFC4-214ENST00000494047 LRP3O75074 770 aa10.49□□□□□ -0.73
RFC4-214ENST00000494047 SCGNO76038 276 aa10.49□□□□□ -0.73
RFC4-214ENST00000494047 TFP02787 698 aa10.49□□□□□ -0.73
RFC4-214ENST00000494047 ANXA2P07355 339 aaKnown RBP10.49□□□□□ -0.73
RFC4-214ENST00000494047 NGFRP08138 427 aa10.49□□□□□ -0.73
RFC4-214ENST00000494047 S1PR1P21453 382 aa10.49□□□□□ -0.73
RFC4-214ENST00000494047 GPR3P46089 330 aa10.49□□□□□ -0.73
RFC4-214ENST00000494047 FNTBP49356 437 aa10.49□□□□□ -0.73
RFC4-214ENST00000494047 SEC13P55735 322 aa10.49□□□□□ -0.73
RFC4-214ENST00000494047 VSX2P58304 361 aaPredicted RBP10.49□□□□□ -0.73
RFC4-214ENST00000494047 RPS11P62280 158 aaKnown RBP eCLIP10.49□□□□□ -0.73
RFC4-214ENST00000494047 GPLD1P80108 840 aa10.49□□□□□ -0.73
RFC4-214ENST00000494047 FHL1Q13642 323 aa10.49□□□□□ -0.73
RFC4-214ENST00000494047 ALKBH1Q13686 389 aaKnown RBP10.49□□□□□ -0.73
RFC4-214ENST00000494047 INSL4Q14641 139 aa10.49□□□□□ -0.73
RFC4-214ENST00000494047 EXOSC7Q15024 291 aaKnown RBP10.49□□□□□ -0.73
RFC4-214ENST00000494047 MPPED2Q15777 294 aa10.49□□□□□ -0.73
RFC4-214ENST00000494047 GRK1Q15835 563 aa10.49□□□□□ -0.73
RFC4-214ENST00000494047 SLC25A35Q3KQZ1 300 aa10.49□□□□□ -0.73
RFC4-214ENST00000494047 ALG10Q5BKT4 473 aa10.49□□□□□ -0.73
RFC4-214ENST00000494047 Q5BKY6 102 aa10.49□□□□□ -0.73
RFC4-214ENST00000494047 KIRREL2Q6UWL6 708 aa10.49□□□□□ -0.73
RFC4-214ENST00000494047 DNM1P46Q6ZS02 220 aa10.49□□□□□ -0.73
RFC4-214ENST00000494047 RD3Q7Z3Z2 195 aa10.49□□□□□ -0.73
RFC4-214ENST00000494047 TAF8Q7Z7C8 310 aa10.49□□□□□ -0.73
RFC4-214ENST00000494047 OR4N4Q8N0Y3 316 aa10.49□□□□□ -0.73
RFC4-214ENST00000494047 MEIOBQ8N635 442 aa10.49□□□□□ -0.73
RFC4-214ENST00000494047 CYB561A3Q8NBI2 242 aa10.49□□□□□ -0.73
RFC4-214ENST00000494047 ZNF680Q8NEM1 530 aa10.49□□□□□ -0.73
RFC4-214ENST00000494047 TSTD1Q8NFU3 115 aa10.49□□□□□ -0.73
RFC4-214ENST00000494047 CCDC107Q8WV48 283 aa10.49□□□□□ -0.73
RFC4-214ENST00000494047 C3orf49Q96BT1 292 aa10.49□□□□□ -0.73
RFC4-214ENST00000494047 PEX11GQ96HA9 241 aa10.49□□□□□ -0.73
RFC4-214ENST00000494047 LOXL4Q96JB6 756 aa10.49□□□□□ -0.73
RFC4-214ENST00000494047 ZFP3Q96NJ6 502 aa10.49□□□□□ -0.73
RFC4-214ENST00000494047 SLC46A1Q96NT5 459 aa10.49□□□□□ -0.73
RFC4-214ENST00000494047 SORCS2Q96PQ0 1159 aa10.49□□□□□ -0.73
RFC4-214ENST00000494047 OR14A2Q96R54 314 aa10.49□□□□□ -0.73
RFC4-214ENST00000494047 DDOQ99489 341 aa10.49□□□□□ -0.73
RFC4-214ENST00000494047 DHRS9Q9BPW9 319 aa10.49□□□□□ -0.73
RFC4-214ENST00000494047 ALG12Q9BV10 488 aa10.49□□□□□ -0.73
RFC4-214ENST00000494047 WDR76Q9H967 626 aa10.49□□□□□ -0.73
RFC4-214ENST00000494047 SYNPO2LQ9H987 977 aa10.49□□□□□ -0.73
RFC4-214ENST00000494047 HCN3Q9P1Z3 774 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms