RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 OR13F1Q8NGS4 319 aa8.22□□□□□ -1.09
LSAMP-205ENST00000490035 ALG12Q9BV10 488 aa8.22□□□□□ -1.09
LSAMP-205ENST00000490035 ABHD6Q9BV23 337 aa8.22□□□□□ -1.09
LSAMP-205ENST00000490035 LMAN1LQ9HAT1 526 aa8.22□□□□□ -1.09
LSAMP-205ENST00000490035 TMEM129A0AVI4 362 aa8.21□□□□□ -1.09
LSAMP-205ENST00000490035 CPNE6O95741 557 aa8.21□□□□□ -1.09
LSAMP-205ENST00000490035 CHRM4P08173 479 aa8.21□□□□□ -1.09
LSAMP-205ENST00000490035 F7P08709 466 aaPredicted RBP8.21□□□□□ -1.09
LSAMP-205ENST00000490035 FCGR2AP12318 317 aa8.21□□□□□ -1.09
LSAMP-205ENST00000490035 CD1EP15812 388 aa8.21□□□□□ -1.09
LSAMP-205ENST00000490035 C1orf61Q13536 156 aa8.21□□□□□ -1.09
LSAMP-205ENST00000490035 MEX3BQ6ZN04 569 aaKnown RBP8.21□□□□□ -1.09
LSAMP-205ENST00000490035 USP53Q70EK8 1073 aa8.21□□□□□ -1.09
LSAMP-205ENST00000490035 CLEC14AQ86T13 490 aa8.21□□□□□ -1.09
LSAMP-205ENST00000490035 CISD2Q8N5K1 135 aaKnown RBP8.21□□□□□ -1.09
LSAMP-205ENST00000490035 RNF170Q96K19 258 aa8.21□□□□□ -1.09
LSAMP-205ENST00000490035 QPCTLQ9NXS2 382 aa8.21□□□□□ -1.09
LSAMP-205ENST00000490035 ABCA3Q99758 1704 aa8.21□□□□□ -1.09
LSAMP-205ENST00000490035 A0A1W2PQ09 198 aa8.21□□□□□ -1.09
LSAMP-205ENST00000490035 CAPNS1P04632 268 aa8.21□□□□□ -1.09
LSAMP-205ENST00000490035 SLC30A7Q8NEW0 376 aa8.21□□□□□ -1.09
LSAMP-205ENST00000490035 BBS1Q8NFJ9 593 aa8.21□□□□□ -1.09
LSAMP-205ENST00000490035 KIRREL1Q96J84 757 aa8.21□□□□□ -1.09
LSAMP-205ENST00000490035 CHRDL1Q9BU40 450 aa8.21□□□□□ -1.09
LSAMP-205ENST00000490035 TXNL4BQ9NX01 149 aaKnown RBP8.21□□□□□ -1.09
LSAMP-205ENST00000490035 FBXL4Q9UKA2 621 aa8.21□□□□□ -1.09
LSAMP-205ENST00000490035 SCN1AP35498 2009 aa8.21□□□□□ -1.09
LSAMP-205ENST00000490035 PIKFYVEQ9Y2I7 2098 aa8.21□□□□□ -1.09
LSAMP-205ENST00000490035 ZFP90Q8TF47 636 aa8.21□□□□□ -1.09
LSAMP-205ENST00000490035 BOD1Q96IK1 185 aa8.21□□□□□ -1.09
LSAMP-205ENST00000490035 SLC29A1Q99808 456 aa8.21□□□□□ -1.09
LSAMP-205ENST00000490035 MS4A8Q9BY19 250 aa8.21□□□□□ -1.09
LSAMP-205ENST00000490035 PCDHB10Q9UN67 800 aa8.21□□□□□ -1.09
LSAMP-205ENST00000490035 COL22A1Q8NFW1 1626 aaPredicted RBP8.21□□□□□ -1.09
LSAMP-205ENST00000490035 ATP6V1G2-DDX39BF2Z307 99 aa8.21□□□□□ -1.1
LSAMP-205ENST00000490035 AIPO00170 330 aa8.21□□□□□ -1.1
LSAMP-205ENST00000490035 GLCEO94923 617 aa8.21□□□□□ -1.1
LSAMP-205ENST00000490035 AIFM1O95831 613 aa8.21□□□□□ -1.1
LSAMP-205ENST00000490035 ADH4P08319 380 aa8.21□□□□□ -1.1
LSAMP-205ENST00000490035 HOXD9P28356 352 aaPredicted RBP8.21□□□□□ -1.1
LSAMP-205ENST00000490035 EVI2BP34910 448 aa8.21□□□□□ -1.1
LSAMP-205ENST00000490035 HNF4GQ14541 408 aa8.21□□□□□ -1.1
LSAMP-205ENST00000490035 OR1S2Q8NGQ3 325 aa8.21□□□□□ -1.1
LSAMP-205ENST00000490035 PAQR8Q8TEZ7 354 aa8.21□□□□□ -1.1
LSAMP-205ENST00000490035 LRIT1Q9P2V4 623 aa8.21□□□□□ -1.1
LSAMP-205ENST00000490035 CTNSO60931 367 aa8.21□□□□□ -1.1
LSAMP-205ENST00000490035 GPX2P18283 190 aa8.21□□□□□ -1.1
LSAMP-205ENST00000490035 TACR1P25103 407 aa8.21□□□□□ -1.1
LSAMP-205ENST00000490035 TGM4P49221 684 aa8.21□□□□□ -1.1
LSAMP-205ENST00000490035 EGR3Q06889 387 aa8.21□□□□□ -1.1
LSAMP-205ENST00000490035 MGAT3Q09327 533 aa8.21□□□□□ -1.1
LSAMP-205ENST00000490035 RPE65Q16518 533 aa8.21□□□□□ -1.1
LSAMP-205ENST00000490035 TMEM41BQ5BJD5 291 aa8.21□□□□□ -1.1
LSAMP-205ENST00000490035 KDM4DQ6B0I6 523 aa8.21□□□□□ -1.1
LSAMP-205ENST00000490035 C15orf54Q8N8G6 183 aa8.21□□□□□ -1.1
LSAMP-205ENST00000490035 MRPL15Q9P015 296 aaKnown RBP8.21□□□□□ -1.1
LSAMP-205ENST00000490035 AADACP22760 399 aa8.21□□□□□ -1.1
LSAMP-205ENST00000490035 KIAA1024LP59773 190 aa8.21□□□□□ -1.1
LSAMP-205ENST00000490035 RPS23P62266 143 aaKnown RBP8.21□□□□□ -1.1
LSAMP-205ENST00000490035 GLYR1Q49A26 553 aaPredicted RBP8.21□□□□□ -1.1
LSAMP-205ENST00000490035 SFRP5Q5T4F7 317 aa8.21□□□□□ -1.1
LSAMP-205ENST00000490035 FCRL6Q6DN72 434 aa8.21□□□□□ -1.1
LSAMP-205ENST00000490035 SFXN4Q6P4A7 337 aa8.21□□□□□ -1.1
LSAMP-205ENST00000490035 FCRLAQ7L513 359 aa8.21□□□□□ -1.1
LSAMP-205ENST00000490035 LRRC15Q8TF66 581 aa8.21□□□□□ -1.1
LSAMP-205ENST00000490035 ZNF582Q96NG8 517 aaPredicted RBP8.21□□□□□ -1.1
LSAMP-205ENST00000490035 ZPBPQ9BS86 351 aa8.21□□□□□ -1.1
LSAMP-205ENST00000490035 SMCO4Q9NRQ5 59 aa8.21□□□□□ -1.1
LSAMP-205ENST00000490035 SCN9AQ15858 1988 aa8.21□□□□□ -1.1
LSAMP-205ENST00000490035 TUBAL3A6NHL2 446 aa8.21□□□□□ -1.1
LSAMP-205ENST00000490035 SLC9B1P1A6NJY1 282 aa8.21□□□□□ -1.1
LSAMP-205ENST00000490035 GDF1P27539 372 aa8.21□□□□□ -1.1
LSAMP-205ENST00000490035 DEFB119Q8N690 84 aa8.21□□□□□ -1.1
LSAMP-205ENST00000490035 CYB561A3Q8NBI2 242 aa8.21□□□□□ -1.1
LSAMP-205ENST00000490035 MVB12AQ96EY5 273 aa8.21□□□□□ -1.1
LSAMP-205ENST00000490035 PAAF1Q9BRP4 392 aa8.21□□□□□ -1.1
LSAMP-205ENST00000490035 EXOSC3Q9NQT5 275 aaKnown RBP8.21□□□□□ -1.1
LSAMP-205ENST00000490035 JTBO76095 146 aa8.2□□□□□ -1.1
LSAMP-205ENST00000490035 SRMP19623 302 aa8.2□□□□□ -1.1
LSAMP-205ENST00000490035 DPP4P27487 766 aa8.2□□□□□ -1.1
LSAMP-205ENST00000490035 SNCAP37840 140 aa8.2□□□□□ -1.1
LSAMP-205ENST00000490035 FOXA1P55317 472 aa8.2□□□□□ -1.1
LSAMP-205ENST00000490035 POU3F1Q03052 451 aaPredicted RBP8.2□□□□□ -1.1
LSAMP-205ENST00000490035 ALKBH1Q13686 389 aaKnown RBP8.2□□□□□ -1.1
LSAMP-205ENST00000490035 PLPP5Q8NEB5 264 aa8.2□□□□□ -1.1
LSAMP-205ENST00000490035 PLEKHF2Q9H8W4 249 aa8.2□□□□□ -1.1
LSAMP-205ENST00000490035 NDRG4Q9ULP0 352 aaKnown RBP8.2□□□□□ -1.1
LSAMP-205ENST00000490035 RP1P56715 2156 aa8.2□□□□□ -1.1
LSAMP-205ENST00000490035 LALBAP00709 142 aa8.2□□□□□ -1.1
LSAMP-205ENST00000490035 TMEM52BQ4KMG9 183 aa8.2□□□□□ -1.1
LSAMP-205ENST00000490035 GRINAQ7Z429 371 aa8.2□□□□□ -1.1
LSAMP-205ENST00000490035 BARHL1Q9BZE3 327 aa8.2□□□□□ -1.1
LSAMP-205ENST00000490035 SLAMF7Q9NQ25 335 aa8.2□□□□□ -1.1
LSAMP-205ENST00000490035 KLRC4-KLRK1H3BQV0 150 aa8.2□□□□□ -1.1
LSAMP-205ENST00000490035 PTPN6P29350 595 aa8.2□□□□□ -1.1
LSAMP-205ENST00000490035 HTR5AP47898 357 aa8.2□□□□□ -1.1
LSAMP-205ENST00000490035 GPR155Q7Z3F1 870 aa8.2□□□□□ -1.1
LSAMP-205ENST00000490035 LILRB4Q8NHJ6 448 aa8.2□□□□□ -1.1
LSAMP-205ENST00000490035 TOE1Q96GM8 510 aaKnown RBP8.2□□□□□ -1.1
LSAMP-205ENST00000490035 OBP2BQ9NPH6 170 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms