RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 SLC22A16Q86VW1 577 aa19.44■□□□□ 0.7
SMC4-221ENST00000489573 JAZF1Q86VZ6 243 aa19.44■□□□□ 0.7
SMC4-221ENST00000489573 CYB561A3Q8NBI2 242 aa19.44■□□□□ 0.7
SMC4-221ENST00000489573 MED20Q9H944 212 aa19.44■□□□□ 0.7
SMC4-221ENST00000489573 VCX3AQ9NNX9 186 aa19.44■□□□□ 0.7
SMC4-221ENST00000489573 QPCTLQ9NXS2 382 aa19.44■□□□□ 0.7
SMC4-221ENST00000489573 A0A1W2PNV4 684 aa19.43■□□□□ 0.7
SMC4-221ENST00000489573 MS4A18H0YCH9 400 aa19.43■□□□□ 0.7
SMC4-221ENST00000489573 ACOT7O00154 380 aa19.43■□□□□ 0.7
SMC4-221ENST00000489573 SERPINI2O75830 405 aa19.43■□□□□ 0.7
SMC4-221ENST00000489573 IGHMP01871 453 aa19.43■□□□□ 0.7
SMC4-221ENST00000489573 HTR1FP30939 366 aa19.43■□□□□ 0.7
SMC4-221ENST00000489573 GFRA1P56159 465 aa19.43■□□□□ 0.7
SMC4-221ENST00000489573 PPIAP62937 165 aaKnown RBP19.43■□□□□ 0.7
SMC4-221ENST00000489573 ST3GAL4Q11206 333 aa19.43■□□□□ 0.7
SMC4-221ENST00000489573 KRR1Q13601 381 aaKnown RBP19.43■□□□□ 0.7
SMC4-221ENST00000489573 MS4A18Q3C1V0 323 aa19.43■□□□□ 0.7
SMC4-221ENST00000489573 HCAR1Q9BXC0 346 aa19.43■□□□□ 0.7
SMC4-221ENST00000489573 ZNF346Q9UL40 294 aaKnown RBP19.43■□□□□ 0.7
SMC4-221ENST00000489573 PCDHGA9Q9Y5G4 932 aaKnown RBP19.43■□□□□ 0.7
SMC4-221ENST00000489573 NCKAP5O14513 1909 aa19.43■□□□□ 0.7
SMC4-221ENST00000489573 A0A1W2PRG6 482 aa19.42■□□□□ 0.7
SMC4-221ENST00000489573 PLGP00747 810 aaPredicted RBP19.42■□□□□ 0.7
SMC4-221ENST00000489573 STSP08842 583 aa19.42■□□□□ 0.7
SMC4-221ENST00000489573 CELA3AP09093 270 aa19.42■□□□□ 0.7
SMC4-221ENST00000489573 POU3F2P20265 443 aaPredicted RBP19.42■□□□□ 0.7
SMC4-221ENST00000489573 CSNK2A1P68400 391 aaPredicted RBP19.42■□□□□ 0.7
SMC4-221ENST00000489573 ZADH2Q8N4Q0 377 aa19.42■□□□□ 0.7
SMC4-221ENST00000489573 SVOPQ8N4V2 548 aa19.42■□□□□ 0.7
SMC4-221ENST00000489573 TMEM99Q8N816 258 aa19.42■□□□□ 0.7
SMC4-221ENST00000489573 NPEPL1Q8NDH3 523 aa19.42■□□□□ 0.7
SMC4-221ENST00000489573 PTP4A1Q93096 173 aa19.42■□□□□ 0.7
SMC4-221ENST00000489573 RNFT2Q96EX2 444 aa19.42■□□□□ 0.7
SMC4-221ENST00000489573 NMNAT3Q96T66 252 aa19.42■□□□□ 0.7
SMC4-221ENST00000489573 TXNIPQ9H3M7 391 aa19.42■□□□□ 0.7
SMC4-221ENST00000489573 FANCFQ9NPI8 374 aa19.42■□□□□ 0.7
SMC4-221ENST00000489573 MRPS18AQ9NVS2 196 aaKnown RBP19.42■□□□□ 0.7
SMC4-221ENST00000489573 A0A0J9YW62 118 aa19.41■□□□□ 0.7
SMC4-221ENST00000489573 IRGMA1A4Y4 181 aa19.41■□□□□ 0.7
SMC4-221ENST00000489573 DPPA5A6NC42 116 aa19.41■□□□□ 0.7
SMC4-221ENST00000489573 MTNR1AP48039 350 aa19.41■□□□□ 0.7
SMC4-221ENST00000489573 ALDH3B2P48448 385 aa19.41■□□□□ 0.7
SMC4-221ENST00000489573 RPL27P61353 136 aaKnown RBP19.41■□□□□ 0.7
SMC4-221ENST00000489573 ACKR1Q16570 336 aa19.41■□□□□ 0.7
SMC4-221ENST00000489573 ZNF239Q16600 458 aaKnown RBP19.41■□□□□ 0.7
SMC4-221ENST00000489573 MESTQ5EB52 335 aa19.41■□□□□ 0.7
SMC4-221ENST00000489573 LEG1Q6P5S2 330 aa19.41■□□□□ 0.7
SMC4-221ENST00000489573 MEPCEQ7L2J0 689 aaKnown RBP19.41■□□□□ 0.7
SMC4-221ENST00000489573 FAM109AQ8N4B1 249 aa19.41■□□□□ 0.7
SMC4-221ENST00000489573 DDOQ99489 341 aa19.41■□□□□ 0.7
SMC4-221ENST00000489573 PCDHGB1Q9Y5G3 927 aa19.41■□□□□ 0.7
SMC4-221ENST00000489573 AQP7P3A6NL99 342 aa19.4■□□□□ 0.7
SMC4-221ENST00000489573 K7ENP7 123 aa19.4■□□□□ 0.7
SMC4-221ENST00000489573 TNFSF11O14788 317 aa19.4■□□□□ 0.7
SMC4-221ENST00000489573 SLC2A5P22732 501 aa19.4■□□□□ 0.7
SMC4-221ENST00000489573 C21orf33P30042 268 aaPredicted RBP19.4■□□□□ 0.7
SMC4-221ENST00000489573 CD97P48960 835 aa19.4■□□□□ 0.7
SMC4-221ENST00000489573 P2RY4P51582 365 aa19.4■□□□□ 0.7
SMC4-221ENST00000489573 RAB40BQ12829 278 aa19.4■□□□□ 0.7
SMC4-221ENST00000489573 NEDD8Q15843 81 aa19.4■□□□□ 0.7
SMC4-221ENST00000489573 KLHL12Q53G59 568 aa19.4■□□□□ 0.7
SMC4-221ENST00000489573 KLHL22Q53GT1 634 aa19.4■□□□□ 0.7
SMC4-221ENST00000489573 INO80CQ6PI98 192 aaPredicted RBP19.4■□□□□ 0.7
SMC4-221ENST00000489573 PAQR6Q6TCH4 344 aa19.4■□□□□ 0.7
SMC4-221ENST00000489573 IGFL3Q6UXB1 125 aa19.4■□□□□ 0.7
SMC4-221ENST00000489573 ESPNLQ6ZVH7 1005 aa19.4■□□□□ 0.7
SMC4-221ENST00000489573 CNTRLQ7Z7A1 2325 aa19.4■□□□□ 0.7
SMC4-221ENST00000489573 PXKQ7Z7A4 578 aa19.4■□□□□ 0.7
SMC4-221ENST00000489573 GGNQ86UU5 652 aa19.4■□□□□ 0.7
SMC4-221ENST00000489573 KDM8Q8N371 416 aa19.4■□□□□ 0.7
SMC4-221ENST00000489573 ARIH2OSQ8N7S6 290 aa19.4■□□□□ 0.7
SMC4-221ENST00000489573 ZNF519Q8TB69 540 aa19.4■□□□□ 0.7
SMC4-221ENST00000489573 LGALS12Q96DT0 336 aa19.4■□□□□ 0.7
SMC4-221ENST00000489573 OR51V1Q9H2C8 321 aa19.4■□□□□ 0.7
SMC4-221ENST00000489573 WARS2Q9UGM6 360 aaKnown RBP19.4■□□□□ 0.7
SMC4-221ENST00000489573 NPIPB13A6NJU9 1138 aa19.4■□□□□ 0.7
SMC4-221ENST00000489573 SLC22A31A6NKX4 558 aa19.4■□□□□ 0.7
SMC4-221ENST00000489573 NPIPB4C9JG80 1138 aa19.4■□□□□ 0.7
SMC4-221ENST00000489573 EIF1BO60739 113 aaKnown RBP19.4■□□□□ 0.7
SMC4-221ENST00000489573 FADS2O95864 444 aaKnown RBP19.4■□□□□ 0.7
SMC4-221ENST00000489573 HLA-DOBP13765 273 aa19.4■□□□□ 0.7
SMC4-221ENST00000489573 JUNBP17275 347 aaPredicted RBP19.4■□□□□ 0.7
SMC4-221ENST00000489573 PCMT1P22061 227 aa19.4■□□□□ 0.7
SMC4-221ENST00000489573 ACVR1BP36896 505 aa19.4■□□□□ 0.7
SMC4-221ENST00000489573 CDKN2AP42771 156 aaKnown RBP19.4■□□□□ 0.7
SMC4-221ENST00000489573 STARP49675 285 aa19.4■□□□□ 0.7
SMC4-221ENST00000489573 DAP3P51398 398 aaKnown RBP19.4■□□□□ 0.7
SMC4-221ENST00000489573 CLDN20P56880 219 aa19.4■□□□□ 0.7
SMC4-221ENST00000489573 MVKQ03426 396 aa19.4■□□□□ 0.7
SMC4-221ENST00000489573 TMED1Q13445 227 aa19.4■□□□□ 0.7
SMC4-221ENST00000489573 NADK2Q4G0N4 442 aa19.4■□□□□ 0.7
SMC4-221ENST00000489573 ARMC4Q5T2S8 1044 aa19.4■□□□□ 0.7
SMC4-221ENST00000489573 GTF2IRD2BQ6EKJ0 949 aa19.4■□□□□ 0.7
SMC4-221ENST00000489573 XAF1Q6GPH4 301 aa19.4■□□□□ 0.7
SMC4-221ENST00000489573 BORAQ6PGQ7 559 aa19.4■□□□□ 0.7
SMC4-221ENST00000489573 LRRC69Q6ZNQ3 347 aa19.4■□□□□ 0.7
SMC4-221ENST00000489573 ADCK1Q86TW2 530 aa19.4■□□□□ 0.7
SMC4-221ENST00000489573 GTF2IRD2Q86UP8 949 aa19.4■□□□□ 0.7
SMC4-221ENST00000489573 OR9Q1Q8NGQ5 310 aa19.4■□□□□ 0.7
SMC4-221ENST00000489573 ZPLD1Q8TCW7 415 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms