RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 RBM45Q8IUH3 476 aaKnown RBP12.18□□□□□ -0.46
VARS-225ENST00000482996 UEVLDQ8IX04 471 aa12.18□□□□□ -0.46
VARS-225ENST00000482996 DEPDC4Q8N2C3 294 aa12.18□□□□□ -0.46
VARS-225ENST00000482996 PIAS4Q8N2W9 510 aaPredicted RBP12.18□□□□□ -0.46
VARS-225ENST00000482996 GPR137CQ8N3F9 429 aa12.18□□□□□ -0.46
VARS-225ENST00000482996 POU5F2Q8N7G0 328 aa12.18□□□□□ -0.46
VARS-225ENST00000482996 WDR31Q8NA23 367 aa12.18□□□□□ -0.46
VARS-225ENST00000482996 LILRB1Q8NHL6 650 aaPredicted RBP12.18□□□□□ -0.46
VARS-225ENST00000482996 ADAMTS16Q8TE57 1224 aa12.18□□□□□ -0.46
VARS-225ENST00000482996 IGFBPL1Q8WX77 278 aa12.18□□□□□ -0.46
VARS-225ENST00000482996 NEUROG1Q92886 237 aa12.18□□□□□ -0.46
VARS-225ENST00000482996 MPP4Q96JB8 637 aa12.18□□□□□ -0.46
VARS-225ENST00000482996 ZNF583Q96ND8 569 aa12.18□□□□□ -0.46
VARS-225ENST00000482996 ALKBH3Q96Q83 286 aaPredicted RBP12.18□□□□□ -0.46
VARS-225ENST00000482996 OBP2BQ9NPH6 170 aa12.18□□□□□ -0.46
VARS-225ENST00000482996 FAIMQ9NVQ4 179 aa12.18□□□□□ -0.46
VARS-225ENST00000482996 MRPL39Q9NYK5 338 aaKnown RBP12.18□□□□□ -0.46
VARS-225ENST00000482996 CISD1Q9NZ45 108 aaKnown RBP12.18□□□□□ -0.46
VARS-225ENST00000482996 B3GAT1Q9P2W7 334 aa12.18□□□□□ -0.46
VARS-225ENST00000482996 POU2F3Q9UKI9 436 aa12.18□□□□□ -0.46
VARS-225ENST00000482996 SHISA9B4DS77 424 aa12.17□□□□□ -0.46
VARS-225ENST00000482996 UPK3AO75631 287 aa12.17□□□□□ -0.46
VARS-225ENST00000482996 COX4I1P13073 169 aa12.17□□□□□ -0.46
VARS-225ENST00000482996 PAX1P15863 534 aa12.17□□□□□ -0.46
VARS-225ENST00000482996 PTNP21246 168 aa12.17□□□□□ -0.46
VARS-225ENST00000482996 PAX7P23759 505 aa12.17□□□□□ -0.46
VARS-225ENST00000482996 CD40P25942 277 aa12.17□□□□□ -0.46
VARS-225ENST00000482996 ROR2Q01974 943 aaKnown RBP12.17□□□□□ -0.46
VARS-225ENST00000482996 LGALS3BPQ08380 585 aa12.17□□□□□ -0.46
VARS-225ENST00000482996 PUDPQ08623 228 aa12.17□□□□□ -0.46
VARS-225ENST00000482996 SLC22A25Q6T423 547 aa12.17□□□□□ -0.46
VARS-225ENST00000482996 LINC00114Q6XXX2 140 aa12.17□□□□□ -0.46
VARS-225ENST00000482996 YTHDF3Q7Z739 585 aaKnown RBP12.17□□□□□ -0.46
VARS-225ENST00000482996 CARM1Q86X55 608 aa12.17□□□□□ -0.46
VARS-225ENST00000482996 KRTAP1-3Q8IUG1 177 aa12.17□□□□□ -0.46
VARS-225ENST00000482996 PIK3C3Q8NEB9 887 aa12.17□□□□□ -0.46
VARS-225ENST00000482996 OR2T12Q8NG77 320 aa12.17□□□□□ -0.46
VARS-225ENST00000482996 OR4D11Q8NGI4 311 aa12.17□□□□□ -0.46
VARS-225ENST00000482996 OR1K1Q8NGR3 316 aa12.17□□□□□ -0.46
VARS-225ENST00000482996 GTPBP3Q969Y2 492 aaKnown RBP12.17□□□□□ -0.46
VARS-225ENST00000482996 SLC41A3Q96GZ6 507 aa12.17□□□□□ -0.46
VARS-225ENST00000482996 C1QTNF6Q9BXI9 259 aa12.17□□□□□ -0.46
VARS-225ENST00000482996 PCDHAC1Q9H158 963 aa12.17□□□□□ -0.46
VARS-225ENST00000482996 ALG2Q9H553 416 aa12.17□□□□□ -0.46
VARS-225ENST00000482996 ZNF701Q9NV72 531 aaPredicted RBP12.17□□□□□ -0.46
VARS-225ENST00000482996 SLC7A7Q9UM01 511 aa12.17□□□□□ -0.46
VARS-225ENST00000482996 SH3GLB1Q9Y371 365 aa12.17□□□□□ -0.46
VARS-225ENST00000482996 NOX1Q9Y5S8 564 aa12.17□□□□□ -0.46
VARS-225ENST00000482996 ZNF469Q96JG9 3925 aaPredicted RBP12.17□□□□□ -0.46
VARS-225ENST00000482996 ELOVL7A1L3X0 281 aa12.16□□□□□ -0.46
VARS-225ENST00000482996 MS4A18H0YCH9 400 aa12.16□□□□□ -0.46
VARS-225ENST00000482996 TRAF3IP2O43734 574 aaPredicted RBP12.16□□□□□ -0.46
VARS-225ENST00000482996 ZNF432O94892 652 aa12.16□□□□□ -0.46
VARS-225ENST00000482996 OR6A2O95222 327 aa12.16□□□□□ -0.46
VARS-225ENST00000482996 SOD3P08294 240 aa12.16□□□□□ -0.46
VARS-225ENST00000482996 DANCRP0C864 163 aa12.16□□□□□ -0.46
VARS-225ENST00000482996 CRYBA2P53672 197 aa12.16□□□□□ -0.46
VARS-225ENST00000482996 ATP5J2P56134 94 aa12.16□□□□□ -0.46
VARS-225ENST00000482996 RIPPLY3P57055 190 aa12.16□□□□□ -0.46
VARS-225ENST00000482996 UBE2NP61088 152 aaKnown RBP12.16□□□□□ -0.46
VARS-225ENST00000482996 POU3F1Q03052 451 aaPredicted RBP12.16□□□□□ -0.46
VARS-225ENST00000482996 LTBQ06643 244 aa12.16□□□□□ -0.46
VARS-225ENST00000482996 MS4A18Q3C1V0 323 aa12.16□□□□□ -0.46
VARS-225ENST00000482996 TBRG1Q3YBR2 411 aa12.16□□□□□ -0.46
VARS-225ENST00000482996 LRRC23Q53EV4 343 aaPredicted RBP12.16□□□□□ -0.46
VARS-225ENST00000482996 HIKESHIQ53FT3 197 aa12.16□□□□□ -0.46
VARS-225ENST00000482996 MICU2Q8IYU8 434 aa12.16□□□□□ -0.46
VARS-225ENST00000482996 ANKK1Q8NFD2 765 aa12.16□□□□□ -0.46
VARS-225ENST00000482996 OR5J2Q8NH18 312 aa12.16□□□□□ -0.46
VARS-225ENST00000482996 TRMT61AQ96FX7 289 aaKnown RBP12.16□□□□□ -0.46
VARS-225ENST00000482996 BOD1Q96IK1 185 aa12.16□□□□□ -0.46
VARS-225ENST00000482996 MOGAT1Q96PD6 335 aa12.16□□□□□ -0.46
VARS-225ENST00000482996 SLC19A3Q9BZV2 496 aa12.16□□□□□ -0.46
VARS-225ENST00000482996 POLR2J2Q9GZM3 115 aaKnown RBP12.16□□□□□ -0.46
VARS-225ENST00000482996 POLR2J3Q9H1A7 115 aaKnown RBP12.16□□□□□ -0.46
VARS-225ENST00000482996 FKRPQ9H9S5 495 aa12.16□□□□□ -0.46
VARS-225ENST00000482996 EFCAB1Q9HAE3 211 aa12.16□□□□□ -0.46
VARS-225ENST00000482996 DLL4Q9NR61 685 aa12.16□□□□□ -0.46
VARS-225ENST00000482996 USP22Q9UPT9 525 aa12.16□□□□□ -0.46
VARS-225ENST00000482996 ARL2BPQ9Y2Y0 163 aa12.16□□□□□ -0.46
VARS-225ENST00000482996 ALPK2Q86TB3 2170 aa12.16□□□□□ -0.46
VARS-225ENST00000482996 ZNF726A6NNF4 738 aa12.15□□□□□ -0.46
VARS-225ENST00000482996 LRRN3E7EW58 273 aa12.15□□□□□ -0.46
VARS-225ENST00000482996 RPL36A-HNRNPH2H7BZ11 118 aa12.15□□□□□ -0.46
VARS-225ENST00000482996 PLPP3O14495 311 aa12.15□□□□□ -0.46
VARS-225ENST00000482996 SNX3O60493 162 aa12.15□□□□□ -0.46
VARS-225ENST00000482996 LYPD3O95274 346 aa12.15□□□□□ -0.46
VARS-225ENST00000482996 CH25HO95992 272 aa12.15□□□□□ -0.46
VARS-225ENST00000482996 HPRP00739 348 aa12.15□□□□□ -0.46
VARS-225ENST00000482996 HIST1H2ABP04908 130 aa12.15□□□□□ -0.46
VARS-225ENST00000482996 HOXB1P14653 301 aaPredicted RBP12.15□□□□□ -0.46
VARS-225ENST00000482996 AHCYP23526 432 aa12.15□□□□□ -0.46
VARS-225ENST00000482996 KDELR2P33947 212 aa12.15□□□□□ -0.46
VARS-225ENST00000482996 TAS2R41P59536 307 aa12.15□□□□□ -0.46
VARS-225ENST00000482996 SLC25A3Q00325 362 aa12.15□□□□□ -0.46
VARS-225ENST00000482996 CYBRD1Q53TN4 286 aa12.15□□□□□ -0.46
VARS-225ENST00000482996 AGAP6Q5VW22 663 aa12.15□□□□□ -0.46
VARS-225ENST00000482996 ANKRD16Q6P6B7 361 aa12.15□□□□□ -0.46
VARS-225ENST00000482996 WDR88Q6ZMY6 472 aa12.15□□□□□ -0.46
VARS-225ENST00000482996 DEF8Q6ZN54 512 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms