RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 M0R1B8 84 aa10.41□□□□□ -0.74
HMGN1-213ENST00000482192 TRAF3IP2O43734 574 aaPredicted RBP10.41□□□□□ -0.74
HMGN1-213ENST00000482192 LYPD3O95274 346 aa10.41□□□□□ -0.74
HMGN1-213ENST00000482192 HPRP00739 348 aa10.41□□□□□ -0.74
HMGN1-213ENST00000482192 THY1P04216 161 aa10.41□□□□□ -0.74
HMGN1-213ENST00000482192 SOD3P08294 240 aa10.41□□□□□ -0.74
HMGN1-213ENST00000482192 DANCRP0C864 163 aa10.41□□□□□ -0.74
HMGN1-213ENST00000482192 PAX7P23759 505 aa10.41□□□□□ -0.74
HMGN1-213ENST00000482192 KDELR2P33947 212 aa10.41□□□□□ -0.74
HMGN1-213ENST00000482192 SEC24CP53992 1094 aa10.41□□□□□ -0.74
HMGN1-213ENST00000482192 CDH11P55287 796 aa10.41□□□□□ -0.74
HMGN1-213ENST00000482192 TAS2R41P59536 307 aa10.41□□□□□ -0.74
HMGN1-213ENST00000482192 UBE2NP61088 152 aaKnown RBP10.41□□□□□ -0.74
HMGN1-213ENST00000482192 SLC25A3Q00325 362 aa10.41□□□□□ -0.74
HMGN1-213ENST00000482192 ROR2Q01974 943 aaKnown RBP10.41□□□□□ -0.74
HMGN1-213ENST00000482192 POU3F1Q03052 451 aaPredicted RBP10.41□□□□□ -0.74
HMGN1-213ENST00000482192 PUDPQ08623 228 aa10.41□□□□□ -0.74
HMGN1-213ENST00000482192 ZNF74Q16587 644 aa10.41□□□□□ -0.74
HMGN1-213ENST00000482192 MS4A18Q3C1V0 323 aa10.41□□□□□ -0.74
HMGN1-213ENST00000482192 TBRG1Q3YBR2 411 aa10.41□□□□□ -0.74
HMGN1-213ENST00000482192 LRRC23Q53EV4 343 aaPredicted RBP10.41□□□□□ -0.74
HMGN1-213ENST00000482192 CYBRD1Q53TN4 286 aa10.41□□□□□ -0.74
HMGN1-213ENST00000482192 ANKRD16Q6P6B7 361 aa10.41□□□□□ -0.74
HMGN1-213ENST00000482192 SLC22A25Q6T423 547 aa10.41□□□□□ -0.74
HMGN1-213ENST00000482192 WDR88Q6ZMY6 472 aa10.41□□□□□ -0.74
HMGN1-213ENST00000482192 LINGO2Q7L985 606 aa10.41□□□□□ -0.74
HMGN1-213ENST00000482192 YTHDF3Q7Z739 585 aaKnown RBP10.41□□□□□ -0.74
HMGN1-213ENST00000482192 PXKQ7Z7A4 578 aa10.41□□□□□ -0.74
HMGN1-213ENST00000482192 TSPYL5Q86VY4 417 aaPredicted RBP10.41□□□□□ -0.74
HMGN1-213ENST00000482192 CARM1Q86X55 608 aa10.41□□□□□ -0.74
HMGN1-213ENST00000482192 MICU2Q8IYU8 434 aa10.41□□□□□ -0.74
HMGN1-213ENST00000482192 TMEM123Q8N131 208 aa10.41□□□□□ -0.74
HMGN1-213ENST00000482192 DEPDC4Q8N2C3 294 aa10.41□□□□□ -0.74
HMGN1-213ENST00000482192 GPR137CQ8N3F9 429 aa10.41□□□□□ -0.74
HMGN1-213ENST00000482192 OR2M2Q96R28 347 aa10.41□□□□□ -0.74
HMGN1-213ENST00000482192 HOPXQ9BPY8 73 aaPredicted RBP10.41□□□□□ -0.74
HMGN1-213ENST00000482192 ELAC2Q9BQ52 826 aaKnown RBP10.41□□□□□ -0.74
HMGN1-213ENST00000482192 ZNF426Q9BUY5 554 aa10.41□□□□□ -0.74
HMGN1-213ENST00000482192 C1QTNF6Q9BXI9 259 aa10.41□□□□□ -0.74
HMGN1-213ENST00000482192 POLR2J2Q9GZM3 115 aaKnown RBP10.41□□□□□ -0.74
HMGN1-213ENST00000482192 NSRP1Q9H0G5 558 aaKnown RBP10.41□□□□□ -0.74
HMGN1-213ENST00000482192 POLR2J3Q9H1A7 115 aaKnown RBP10.41□□□□□ -0.74
HMGN1-213ENST00000482192 EFCAB1Q9HAE3 211 aa10.41□□□□□ -0.74
HMGN1-213ENST00000482192 MOV10Q9HCE1 1003 aaKnown RBP10.41□□□□□ -0.74
HMGN1-213ENST00000482192 POU2F3Q9UKI9 436 aa10.41□□□□□ -0.74
HMGN1-213ENST00000482192 ABCA4P78363 2273 aa10.41□□□□□ -0.74
HMGN1-213ENST00000482192 PRRC2AP48634 2157 aaKnown RBP10.41□□□□□ -0.74
HMGN1-213ENST00000482192 LRRN3E7EW58 273 aa10.4□□□□□ -0.74
HMGN1-213ENST00000482192 RPL36A-HNRNPH2H7BZ11 118 aa10.4□□□□□ -0.74
HMGN1-213ENST00000482192 KPNA4O00629 521 aaPredicted RBP10.4□□□□□ -0.74
HMGN1-213ENST00000482192 PLPP3O14495 311 aa10.4□□□□□ -0.74
HMGN1-213ENST00000482192 NDUFAB1O14561 156 aa10.4□□□□□ -0.74
HMGN1-213ENST00000482192 OR5F1O95221 314 aa10.4□□□□□ -0.74
HMGN1-213ENST00000482192 OR6A2O95222 327 aa10.4□□□□□ -0.74
HMGN1-213ENST00000482192 AHCYP23526 432 aa10.4□□□□□ -0.74
HMGN1-213ENST00000482192 NUDT2P50583 147 aa10.4□□□□□ -0.74
HMGN1-213ENST00000482192 RIPPLY3P57055 190 aa10.4□□□□□ -0.74
HMGN1-213ENST00000482192 LIPEQ05469 1076 aa10.4□□□□□ -0.74
HMGN1-213ENST00000482192 SPOCK1Q08629 439 aa10.4□□□□□ -0.74
HMGN1-213ENST00000482192 PGGHGQ32M88 737 aa10.4□□□□□ -0.74
HMGN1-213ENST00000482192 HACD2Q6Y1H2 254 aa10.4□□□□□ -0.74
HMGN1-213ENST00000482192 DEF8Q6ZN54 512 aa10.4□□□□□ -0.74
HMGN1-213ENST00000482192 SLC15A3Q8IY34 581 aa10.4□□□□□ -0.74
HMGN1-213ENST00000482192 OR5J2Q8NH18 312 aa10.4□□□□□ -0.74
HMGN1-213ENST00000482192 MAGEE2Q8TD90 523 aaPredicted RBP10.4□□□□□ -0.74
HMGN1-213ENST00000482192 LZICQ8WZA0 190 aa10.4□□□□□ -0.74
HMGN1-213ENST00000482192 GTPBP3Q969Y2 492 aaKnown RBP10.4□□□□□ -0.74
HMGN1-213ENST00000482192 CMTM5Q96DZ9 223 aa10.4□□□□□ -0.74
HMGN1-213ENST00000482192 TPD52L3Q96J77 140 aa10.4□□□□□ -0.74
HMGN1-213ENST00000482192 C18orf12Q96KH6 178 aa10.4□□□□□ -0.74
HMGN1-213ENST00000482192 FAM107BQ9H098 131 aa10.4□□□□□ -0.74
HMGN1-213ENST00000482192 ALG2Q9H553 416 aa10.4□□□□□ -0.74
HMGN1-213ENST00000482192 FKRPQ9H9S5 495 aa10.4□□□□□ -0.74
HMGN1-213ENST00000482192 NANSQ9NR45 359 aa10.4□□□□□ -0.74
HMGN1-213ENST00000482192 CMTM6Q9NX76 183 aa10.4□□□□□ -0.74
HMGN1-213ENST00000482192 ZNF229Q9UJW7 825 aa10.4□□□□□ -0.74
HMGN1-213ENST00000482192 FREM1Q5H8C1 2179 aa10.4□□□□□ -0.74
HMGN1-213ENST00000482192 AKAP6Q13023 2319 aa10.39□□□□□ -0.75
HMGN1-213ENST00000482192 HIVEP1P15822 2718 aa10.39□□□□□ -0.75
HMGN1-213ENST00000482192 ARPC4-TTLL3A0A0A6YYG9 625 aa10.39□□□□□ -0.75
HMGN1-213ENST00000482192 OVOL3O00110 214 aa10.39□□□□□ -0.75
HMGN1-213ENST00000482192 CH25HO95992 272 aa10.39□□□□□ -0.75
HMGN1-213ENST00000482192 ADORA3P0DMS8 318 aa10.39□□□□□ -0.75
HMGN1-213ENST00000482192 THRBP10828 461 aa10.39□□□□□ -0.75
HMGN1-213ENST00000482192 HLA-DOBP13765 273 aa10.39□□□□□ -0.75
HMGN1-213ENST00000482192 TNFRSF1BP20333 461 aa10.39□□□□□ -0.75
HMGN1-213ENST00000482192 LSP1P33241 339 aa10.39□□□□□ -0.75
HMGN1-213ENST00000482192 RBM34P42696 430 aaKnown RBP10.39□□□□□ -0.75
HMGN1-213ENST00000482192 OR1E2P47887 323 aa10.39□□□□□ -0.75
HMGN1-213ENST00000482192 SLC7A2P52569 658 aa10.39□□□□□ -0.75
HMGN1-213ENST00000482192 ATP5J2P56134 94 aa10.39□□□□□ -0.75
HMGN1-213ENST00000482192 SELENOWP63302 87 aa10.39□□□□□ -0.75
HMGN1-213ENST00000482192 AGAP6Q5VW22 663 aa10.39□□□□□ -0.75
HMGN1-213ENST00000482192 C8orf82Q6P1X6 216 aaPredicted RBP10.39□□□□□ -0.75
HMGN1-213ENST00000482192 CPLX4Q7Z7G2 160 aa10.39□□□□□ -0.75
HMGN1-213ENST00000482192 TREML1Q86YW5 311 aa10.39□□□□□ -0.75
HMGN1-213ENST00000482192 C20orf196Q8IYI0 205 aa10.39□□□□□ -0.75
HMGN1-213ENST00000482192 BCL2L2Q92843 193 aaPredicted RBP10.39□□□□□ -0.75
HMGN1-213ENST00000482192 TRMT61AQ96FX7 289 aaKnown RBP10.39□□□□□ -0.75
HMGN1-213ENST00000482192 Q96MF0 132 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms