RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, human

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-223	ENST00000479656	PUDP	Q08623	228 aa		10.06	□□□□□ -0.8
APTX-223	ENST00000479656	ST3GAL4	Q11206	333 aa		10.06	□□□□□ -0.8
APTX-223	ENST00000479656	SLC10A1	Q14973	349 aa		10.06	□□□□□ -0.8
APTX-223	ENST00000479656	RNFT1	Q5M7Z0	435 aa		10.06	□□□□□ -0.8
APTX-223	ENST00000479656	INO80C	Q6PI98	192 aa	Predicted RBP	10.06	□□□□□ -0.8
APTX-223	ENST00000479656	B3GLCT	Q6Y288	498 aa		10.06	□□□□□ -0.8
APTX-223	ENST00000479656	KCTD8	Q6ZWB6	473 aa		10.06	□□□□□ -0.8
APTX-223	ENST00000479656	SLC22A16	Q86VW1	577 aa		10.06	□□□□□ -0.8
APTX-223	ENST00000479656	UBQLNL	Q8IYU4	475 aa		10.06	□□□□□ -0.8
APTX-223	ENST00000479656	STX19	Q8N4C7	294 aa		10.06	□□□□□ -0.8
APTX-223	ENST00000479656	ZADH2	Q8N4Q0	377 aa		10.06	□□□□□ -0.8
APTX-223	ENST00000479656	LSM14A	Q8ND56	463 aa	Known RBP	10.06	□□□□□ -0.8
APTX-223	ENST00000479656	NPEPL1	Q8NDH3	523 aa		10.06	□□□□□ -0.8
APTX-223	ENST00000479656	ZPLD1	Q8TCW7	415 aa		10.06	□□□□□ -0.8
APTX-223	ENST00000479656	KLHL15	Q96M94	604 aa		10.06	□□□□□ -0.8
APTX-223	ENST00000479656	DDO	Q99489	341 aa		10.06	□□□□□ -0.8
APTX-223	ENST00000479656	DEFB127	Q9H1M4	99 aa		10.06	□□□□□ -0.8
APTX-223	ENST00000479656	OR51V1	Q9H2C8	321 aa		10.06	□□□□□ -0.8
APTX-223	ENST00000479656	B3GALT5	Q9Y2C3	310 aa		10.06	□□□□□ -0.8
APTX-223	ENST00000479656	SNX5	Q9Y5X3	404 aa		10.06	□□□□□ -0.8
APTX-223	ENST00000479656	EFCAB10	A6NFE3	127 aa		10.05	□□□□□ -0.8
APTX-223	ENST00000479656	GJE1	A6NN92	205 aa		10.05	□□□□□ -0.8
APTX-223	ENST00000479656		K7EM74	188 aa		10.05	□□□□□ -0.8
APTX-223	ENST00000479656	EIF1AY	O14602	144 aa	Known RBP	10.05	□□□□□ -0.8
APTX-223	ENST00000479656	SEC14L5	O43304	696 aa		10.05	□□□□□ -0.8
APTX-223	ENST00000479656	FZD7	O75084	574 aa		10.05	□□□□□ -0.8
APTX-223	ENST00000479656	TXNDC12	O95881	172 aa		10.05	□□□□□ -0.8
APTX-223	ENST00000479656	MT-ND2	P03891	347 aa		10.05	□□□□□ -0.8
APTX-223	ENST00000479656	PDGFA	P04085	211 aa		10.05	□□□□□ -0.8
APTX-223	ENST00000479656	ITGB2	P05107	769 aa		10.05	□□□□□ -0.8
APTX-223	ENST00000479656	GYPB	P06028	91 aa		10.05	□□□□□ -0.8
APTX-223	ENST00000479656	CDK1	P06493	297 aa		10.05	□□□□□ -0.8
APTX-223	ENST00000479656	ADRA2A	P08913	450 aa		10.05	□□□□□ -0.8
APTX-223	ENST00000479656	PLA2G5	P39877	138 aa		10.05	□□□□□ -0.8
APTX-223	ENST00000479656	CDH11	P55287	796 aa		10.05	□□□□□ -0.8
APTX-223	ENST00000479656	SLC35A1	P78382	337 aa		10.05	□□□□□ -0.8
APTX-223	ENST00000479656	PMP22	Q01453	160 aa		10.05	□□□□□ -0.8
APTX-223	ENST00000479656	ACKR1	Q16570	336 aa		10.05	□□□□□ -0.8
APTX-223	ENST00000479656	KLHL12	Q53G59	568 aa		10.05	□□□□□ -0.8
APTX-223	ENST00000479656	TMEM225	Q6GV28	225 aa		10.05	□□□□□ -0.8
APTX-223	ENST00000479656	LEG1	Q6P5S2	330 aa		10.05	□□□□□ -0.8
APTX-223	ENST00000479656	LRRC69	Q6ZNQ3	347 aa		10.05	□□□□□ -0.8
APTX-223	ENST00000479656	GGN	Q86UU5	652 aa		10.05	□□□□□ -0.8
APTX-223	ENST00000479656	OR9Q1	Q8NGQ5	310 aa		10.05	□□□□□ -0.8
APTX-223	ENST00000479656	RFK	Q969G6	155 aa		10.05	□□□□□ -0.8
APTX-223	ENST00000479656	MYDGF	Q969H8	173 aa		10.05	□□□□□ -0.8
APTX-223	ENST00000479656	SLC6A15	Q9H2J7	730 aa		10.05	□□□□□ -0.8
APTX-223	ENST00000479656	CCNB1IP1	Q9NPC3	277 aa		10.05	□□□□□ -0.8
APTX-223	ENST00000479656	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	10.05	□□□□□ -0.8
APTX-223	ENST00000479656	PCDHGA9	Q9Y5G4	932 aa	Known RBP	10.05	□□□□□ -0.8
APTX-223	ENST00000479656	MED12	Q93074	2177 aa		10.05	□□□□□ -0.8
APTX-223	ENST00000479656	CFAP47	Q6ZTR5	3102 aa		10.05	□□□□□ -0.8
APTX-223	ENST00000479656	IGHV3-15	A0A0B4J1V0	119 aa		10.04	□□□□□ -0.8
APTX-223	ENST00000479656	DPPA5	A6NC42	116 aa		10.04	□□□□□ -0.8
APTX-223	ENST00000479656	OR6C68	A6NDL8	312 aa		10.04	□□□□□ -0.8
APTX-223	ENST00000479656	SNTN	A6NMZ2	147 aa		10.04	□□□□□ -0.8
APTX-223	ENST00000479656	ARHGEF9	O43307	516 aa		10.04	□□□□□ -0.8
APTX-223	ENST00000479656	RAMP1	O60894	148 aa		10.04	□□□□□ -0.8
APTX-223	ENST00000479656	APOL3	O95236	402 aa		10.04	□□□□□ -0.8
APTX-223	ENST00000479656	POU3F2	P20265	443 aa	Predicted RBP	10.04	□□□□□ -0.8
APTX-223	ENST00000479656	PAICS	P22234	425 aa	Known RBP	10.04	□□□□□ -0.8
APTX-223	ENST00000479656	HTR1F	P30939	366 aa		10.04	□□□□□ -0.8
APTX-223	ENST00000479656	ACVR1B	P36896	505 aa		10.04	□□□□□ -0.8
APTX-223	ENST00000479656	MAP2K4	P45985	399 aa		10.04	□□□□□ -0.8
APTX-223	ENST00000479656	RPL5	P46777	297 aa	Known RBP	10.04	□□□□□ -0.8
APTX-223	ENST00000479656	MTNR1A	P48039	350 aa		10.04	□□□□□ -0.8
APTX-223	ENST00000479656	P2RY4	P51582	365 aa		10.04	□□□□□ -0.8
APTX-223	ENST00000479656	SLC16A1	P53985	500 aa		10.04	□□□□□ -0.8
APTX-223	ENST00000479656	NR1H2	P55055	460 aa		10.04	□□□□□ -0.8
APTX-223	ENST00000479656	CLDN15	P56746	228 aa		10.04	□□□□□ -0.8
APTX-223	ENST00000479656	RPL27	P61353	136 aa	Known RBP	10.04	□□□□□ -0.8
APTX-223	ENST00000479656	EMX1	Q04741	257 aa	Predicted RBP	10.04	□□□□□ -0.8
APTX-223	ENST00000479656	MELK	Q14680	651 aa		10.04	□□□□□ -0.8
APTX-223	ENST00000479656	MEST	Q5EB52	335 aa		10.04	□□□□□ -0.8
APTX-223	ENST00000479656	EMC4	Q5J8M3	183 aa		10.04	□□□□□ -0.8
APTX-223	ENST00000479656	GPR139	Q6DWJ6	353 aa		10.04	□□□□□ -0.8
APTX-223	ENST00000479656	BORA	Q6PGQ7	559 aa		10.04	□□□□□ -0.8
APTX-223	ENST00000479656	IGFL3	Q6UXB1	125 aa		10.04	□□□□□ -0.8
APTX-223	ENST00000479656	MEPCE	Q7L2J0	689 aa	Known RBP	10.04	□□□□□ -0.8
APTX-223	ENST00000479656	PRSS48	Q7RTY5	328 aa		10.04	□□□□□ -0.8
APTX-223	ENST00000479656	JAZF1	Q86VZ6	243 aa		10.04	□□□□□ -0.8
APTX-223	ENST00000479656	FAM109A	Q8N4B1	249 aa		10.04	□□□□□ -0.8
APTX-223	ENST00000479656	ARIH2OS	Q8N7S6	290 aa		10.04	□□□□□ -0.8
APTX-223	ENST00000479656	TM9SF4	Q92544	642 aa		10.04	□□□□□ -0.8
APTX-223	ENST00000479656	RNFT2	Q96EX2	444 aa		10.04	□□□□□ -0.8
APTX-223	ENST00000479656	TXNDC15	Q96J42	360 aa		10.04	□□□□□ -0.8
APTX-223	ENST00000479656	SIGLEC11	Q96RL6	698 aa		10.04	□□□□□ -0.8
APTX-223	ENST00000479656	TEAD3	Q99594	435 aa		10.04	□□□□□ -0.8
APTX-223	ENST00000479656	TXNIP	Q9H3M7	391 aa		10.04	□□□□□ -0.8
APTX-223	ENST00000479656	CNOT2	Q9NZN8	540 aa	Known RBP	10.04	□□□□□ -0.8
APTX-223	ENST00000479656		A0A1W2PRG6	482 aa		10.04	□□□□□ -0.8
APTX-223	ENST00000479656	C1QTNF9B	B2RNN3	333 aa		10.04	□□□□□ -0.8
APTX-223	ENST00000479656		H7C1C5	153 aa		10.04	□□□□□ -0.8
APTX-223	ENST00000479656	LINC01387	J3KSC0	135 aa		10.04	□□□□□ -0.8
APTX-223	ENST00000479656	ACOT7	O00154	380 aa		10.04	□□□□□ -0.8
APTX-223	ENST00000479656	C1QTNF9	P0C862	333 aa		10.04	□□□□□ -0.8
APTX-223	ENST00000479656	IFNGR1	P15260	489 aa		10.04	□□□□□ -0.8
APTX-223	ENST00000479656	CARD18	P57730	90 aa		10.04	□□□□□ -0.8
APTX-223	ENST00000479656	RPS7	P62081	194 aa	Known RBP	10.04	□□□□□ -0.8
APTX-223	ENST00000479656	LCN6	P62502	163 aa		10.04	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms