RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-231	ENST00000477334	DIRAS1	O95057	198 aa		2.72	□□□□□ -1.97
RBM39-231	ENST00000477334	MOS	P00540	346 aa		2.72	□□□□□ -1.97
RBM39-231	ENST00000477334	ASGR1	P07306	291 aa		2.72	□□□□□ -1.97
RBM39-231	ENST00000477334	CAPN1	P07384	714 aa		2.72	□□□□□ -1.97
RBM39-231	ENST00000477334	CHTF8	P0CG12	524 aa		2.72	□□□□□ -1.97
RBM39-231	ENST00000477334	ZNF853	P0CG23	659 aa		2.72	□□□□□ -1.97
RBM39-231	ENST00000477334	MAGEA8	P43361	318 aa		2.72	□□□□□ -1.97
RBM39-231	ENST00000477334	KIR2DS4	P43632	304 aa		2.72	□□□□□ -1.97
RBM39-231	ENST00000477334	VDAC2	P45880	294 aa	Predicted RBP	2.72	□□□□□ -1.97
RBM39-231	ENST00000477334	BST1	Q10588	318 aa		2.72	□□□□□ -1.97
RBM39-231	ENST00000477334	SRSF5	Q13243	272 aa	Known RBP	2.72	□□□□□ -1.97
RBM39-231	ENST00000477334	TMED1	Q13445	227 aa		2.72	□□□□□ -1.97
RBM39-231	ENST00000477334	DPYSL2	Q16555	572 aa		2.72	□□□□□ -1.97
RBM39-231	ENST00000477334	PARP15	Q460N3	678 aa		2.72	□□□□□ -1.97
RBM39-231	ENST00000477334	DMRTC1	Q5HYR2	192 aa		2.72	□□□□□ -1.97
RBM39-231	ENST00000477334	OR52E8	Q6IFG1	317 aa		2.72	□□□□□ -1.97
RBM39-231	ENST00000477334		Q6P435	159 aa		2.72	□□□□□ -1.97
RBM39-231	ENST00000477334	KRTAP5-5	Q701N2	237 aa	Predicted RBP	2.72	□□□□□ -1.97
RBM39-231	ENST00000477334	PGAP1	Q75T13	922 aa		2.72	□□□□□ -1.97
RBM39-231	ENST00000477334	PRSS41	Q7RTY9	318 aa		2.72	□□□□□ -1.97
RBM39-231	ENST00000477334	PAQR7	Q86WK9	346 aa		2.72	□□□□□ -1.97
RBM39-231	ENST00000477334	SPATA4	Q8NEY3	305 aa		2.72	□□□□□ -1.97
RBM39-231	ENST00000477334	OR10G3	Q8NGC4	313 aa		2.72	□□□□□ -1.97
RBM39-231	ENST00000477334	OR6C4	Q8NGE1	309 aa		2.72	□□□□□ -1.97
RBM39-231	ENST00000477334	COQ2	Q96H96	371 aa		2.72	□□□□□ -1.97
RBM39-231	ENST00000477334	RNF2	Q99496	336 aa		2.72	□□□□□ -1.97
RBM39-231	ENST00000477334	MRPL45	Q9BRJ2	306 aa	Known RBP	2.72	□□□□□ -1.97
RBM39-231	ENST00000477334	MTG1	Q9BT17	334 aa	Predicted RBP	2.72	□□□□□ -1.97
RBM39-231	ENST00000477334	RAB34	Q9BZG1	259 aa		2.72	□□□□□ -1.97
RBM39-231	ENST00000477334	IQCG	Q9H095	443 aa	Known RBP	2.72	□□□□□ -1.97
RBM39-231	ENST00000477334	C20orf85	Q9H1P6	137 aa		2.72	□□□□□ -1.97
RBM39-231	ENST00000477334	REEP4	Q9H6H4	257 aa		2.72	□□□□□ -1.97
RBM39-231	ENST00000477334	RNF167	Q9H6Y7	350 aa		2.72	□□□□□ -1.97
RBM39-231	ENST00000477334	SLC2A8	Q9NY64	477 aa		2.72	□□□□□ -1.97
RBM39-231	ENST00000477334	PSME2	Q9UL46	239 aa		2.72	□□□□□ -1.97
RBM39-231	ENST00000477334	POLDIP2	Q9Y2S7	368 aa		2.72	□□□□□ -1.97
RBM39-231	ENST00000477334	RPL36	Q9Y3U8	105 aa	Known RBP	2.72	□□□□□ -1.97
RBM39-231	ENST00000477334	TTC41P	Q6P2S7	1318 aa		2.71	□□□□□ -1.98
RBM39-231	ENST00000477334	NSG1	A0A0A6YYJ2	146 aa		2.71	□□□□□ -1.98
RBM39-231	ENST00000477334		A0A1B0GVL5	298 aa		2.71	□□□□□ -1.98
RBM39-231	ENST00000477334	NCF1B	A6NI72	391 aa	Predicted RBP	2.71	□□□□□ -1.98
RBM39-231	ENST00000477334	NCF1C	A8MVU1	366 aa	Predicted RBP	2.71	□□□□□ -1.98
RBM39-231	ENST00000477334	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	2.71	□□□□□ -1.98
RBM39-231	ENST00000477334	WRB	O00258	174 aa		2.71	□□□□□ -1.98
RBM39-231	ENST00000477334	AGPAT2	O15120	278 aa		2.71	□□□□□ -1.98
RBM39-231	ENST00000477334	TIMM8A	O60220	97 aa	Predicted RBP	2.71	□□□□□ -1.98
RBM39-231	ENST00000477334	MMP1	P03956	469 aa		2.71	□□□□□ -1.98
RBM39-231	ENST00000477334	KLK3	P07288	261 aa	Predicted RBP	2.71	□□□□□ -1.98
RBM39-231	ENST00000477334	ICAM2	P13598	275 aa		2.71	□□□□□ -1.98
RBM39-231	ENST00000477334	ANXA8	P13928	327 aa		2.71	□□□□□ -1.98
RBM39-231	ENST00000477334	TNNI1	P19237	187 aa		2.71	□□□□□ -1.98
RBM39-231	ENST00000477334	PCMT1	P22061	227 aa		2.71	□□□□□ -1.98
RBM39-231	ENST00000477334	CASQ1	P31415	396 aa		2.71	□□□□□ -1.98
RBM39-231	ENST00000477334	CCR1	P32246	355 aa		2.71	□□□□□ -1.98
RBM39-231	ENST00000477334	RPL13A	P40429	203 aa	Known RBP	2.71	□□□□□ -1.98
RBM39-231	ENST00000477334	GSS	P48637	474 aa		2.71	□□□□□ -1.98
RBM39-231	ENST00000477334	CCT3	P49368	545 aa	Known RBP	2.71	□□□□□ -1.98
RBM39-231	ENST00000477334	CASP4	P49662	377 aa		2.71	□□□□□ -1.98
RBM39-231	ENST00000477334	GPM6A	P51674	278 aa		2.71	□□□□□ -1.98
RBM39-231	ENST00000477334	EIF4EBP2	Q13542	120 aa	Predicted RBP	2.71	□□□□□ -1.98
RBM39-231	ENST00000477334	IL18	Q14116	193 aa		2.71	□□□□□ -1.98
RBM39-231	ENST00000477334	CARD16	Q5EG05	197 aa		2.71	□□□□□ -1.98
RBM39-231	ENST00000477334	MARCH8	Q5T0T0	291 aa		2.71	□□□□□ -1.98
RBM39-231	ENST00000477334	ANXA8L1	Q5VT79	327 aa		2.71	□□□□□ -1.98
RBM39-231	ENST00000477334	OR4F3	Q6IEY1	312 aa		2.71	□□□□□ -1.98
RBM39-231	ENST00000477334	HSDL2	Q6YN16	418 aa		2.71	□□□□□ -1.98
RBM39-231	ENST00000477334	CENPQ	Q7L2Z9	268 aa	Predicted RBP	2.71	□□□□□ -1.98
RBM39-231	ENST00000477334	CCDC148	Q8NFR7	591 aa		2.71	□□□□□ -1.98
RBM39-231	ENST00000477334	BLOC1S5	Q8TDH9	187 aa		2.71	□□□□□ -1.98
RBM39-231	ENST00000477334	SRSF12	Q8WXF0	261 aa	Known RBP	2.71	□□□□□ -1.98
RBM39-231	ENST00000477334	NPY6R	Q99463	290 aa		2.71	□□□□□ -1.98
RBM39-231	ENST00000477334	COPS8	Q99627	209 aa		2.71	□□□□□ -1.98
RBM39-231	ENST00000477334	CHRDL1	Q9BU40	450 aa		2.71	□□□□□ -1.98
RBM39-231	ENST00000477334	NUP58	Q9BVL2	599 aa		2.71	□□□□□ -1.98
RBM39-231	ENST00000477334	ROPN1B	Q9BZX4	212 aa	Predicted RBP	2.71	□□□□□ -1.98
RBM39-231	ENST00000477334	ACTR6	Q9GZN1	396 aa		2.71	□□□□□ -1.98
RBM39-231	ENST00000477334	CRLF2	Q9HC73	371 aa		2.71	□□□□□ -1.98
RBM39-231	ENST00000477334	MCCC2	Q9HCC0	563 aa		2.71	□□□□□ -1.98
RBM39-231	ENST00000477334	GLRX2	Q9NS18	164 aa		2.71	□□□□□ -1.98
RBM39-231	ENST00000477334	THUMPD1	Q9NXG2	353 aa	Known RBP	2.71	□□□□□ -1.98
RBM39-231	ENST00000477334	PLEKHG2	Q9H7P9	1386 aa		2.71	□□□□□ -1.98
RBM39-231	ENST00000477334	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	2.71	□□□□□ -1.98
RBM39-231	ENST00000477334	ARPC4-TTLL3	A0A0A6YYG9	625 aa		2.7	□□□□□ -1.98
RBM39-231	ENST00000477334	SERTM2	A0A1B0GWG4	89 aa		2.7	□□□□□ -1.98
RBM39-231	ENST00000477334	SMCO3	A2RU48	225 aa		2.7	□□□□□ -1.98
RBM39-231	ENST00000477334	BTBD17	A6NE02	478 aa		2.7	□□□□□ -1.98
RBM39-231	ENST00000477334	SNTN	A6NMZ2	147 aa		2.7	□□□□□ -1.98
RBM39-231	ENST00000477334	FAM166B	A8MTA8	275 aa		2.7	□□□□□ -1.98
RBM39-231	ENST00000477334		L7N2F9	121 aa		2.7	□□□□□ -1.98
RBM39-231	ENST00000477334	FOXE1	O00358	373 aa	Predicted RBP	2.7	□□□□□ -1.98
RBM39-231	ENST00000477334	LSM1	O15116	133 aa	Known RBP	2.7	□□□□□ -1.98
RBM39-231	ENST00000477334	RNF13	O43567	381 aa		2.7	□□□□□ -1.98
RBM39-231	ENST00000477334	CACNG3	O60359	315 aa		2.7	□□□□□ -1.98
RBM39-231	ENST00000477334	OXSR1	O95747	527 aa	Predicted RBP	2.7	□□□□□ -1.98
RBM39-231	ENST00000477334	NCK1	P16333	377 aa		2.7	□□□□□ -1.98
RBM39-231	ENST00000477334	ZNF32	P17041	273 aa		2.7	□□□□□ -1.98
RBM39-231	ENST00000477334	CASP14	P31944	242 aa		2.7	□□□□□ -1.98
RBM39-231	ENST00000477334	GLP1R	P43220	463 aa		2.7	□□□□□ -1.98
RBM39-231	ENST00000477334	QARS	P47897	775 aa	Known RBP	2.7	□□□□□ -1.98
RBM39-231	ENST00000477334	ARRB1	P49407	418 aa	Predicted RBP	2.7	□□□□□ -1.98

Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms