RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 HYAL1Q12794 435 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 GPR50Q13585 617 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 ARL13AQ5H913 290 aaPredicted RBP3.17□□□□□ -1.9
UBR3-208ENST00000474426 TCTEX1D4Q5JR98 221 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 NXNL2Q5VZ03 156 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 DHRS11Q6UWP2 260 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 AHSA2Q719I0 299 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 G2E3Q7L622 706 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 TMEM126BQ8IUX1 230 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 VRK3Q8IV63 474 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 METTL13Q8N6R0 699 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 OR9Q2Q8NGE9 314 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 OR5J2Q8NH18 312 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 OR14A16Q8NHC5 309 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 LGALS14Q8TCE9 139 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 SH3RF2Q8TEC5 729 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 FBLIM1Q8WUP2 373 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 NEU4Q8WWR8 484 aaPredicted RBP3.17□□□□□ -1.9
UBR3-208ENST00000474426 NAT6Q93015 286 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 SLC6A7Q99884 636 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 SPAG8Q99932 426 aaPredicted RBP3.17□□□□□ -1.9
UBR3-208ENST00000474426 MRIQ9BWK5 157 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 RAB11FIP5Q9BXF6 653 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 LHPPQ9H008 270 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 CST9LQ9H4G1 147 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 RRAGCQ9HB90 399 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 SAR1AQ9NR31 198 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 ADAM29Q9UKF5 820 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 ZNF346Q9UL40 294 aaKnown RBP3.17□□□□□ -1.9
UBR3-208ENST00000474426 HHLA2Q9UM44 414 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 IQSEC2Q5JU85 1478 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 PLXND1Q9Y4D7 1925 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 TGIF2-C20orf24A0A0A6YYL0 155 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 KIR2DL5BA0A0G2JN68 375 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 KIR2DL5BA0A0G2JPC4 375 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 A0A1W2PPE3 182 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 CDHR4A6H8M9 788 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 SMIM9A6NGZ8 99 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 IFITM10A6NMD0 228 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 F6UZH7 168 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 NDUFS4O43181 175 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 MFSD11O43934 449 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 CDC40O60508 579 aaKnown RBP eCLIP3.17□□□□□ -1.9
UBR3-208ENST00000474426 UPK1BO75841 260 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 S1PR2O95136 353 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 ETHE1O95571 254 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 WNT2P09544 360 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 PVALBP20472 110 aaPredicted RBP3.17□□□□□ -1.9
UBR3-208ENST00000474426 GABRR2P28476 465 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 KIR2DL2P43627 348 aaPredicted RBP3.17□□□□□ -1.9
UBR3-208ENST00000474426 FAM3BP58499 235 aaPredicted RBP3.17□□□□□ -1.9
UBR3-208ENST00000474426 RAB5BP61020 215 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 CD69Q07108 199 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 OR1Q1Q15612 314 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 PTPRNQ16849 979 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 ZNF585BQ52M93 769 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 UNC50Q53HI1 259 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 C6orf226Q5I0X4 101 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 LY6G6FQ5SQ64 297 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 ZDHHC24Q6UX98 284 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 NAPRTQ6XQN6 538 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 TPRG1Q6ZUI0 275 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 ASCL5Q7RTU5 278 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 CCDC190Q86UF4 302 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 KIR2DL5AQ8N109 375 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 TMEM217Q8N7C4 229 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 NPEPL1Q8NDH3 523 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 OR4D5Q8NGN0 318 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 OR52E5Q8NH55 327 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 OR51F2Q8NH61 342 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 KIR2DL5BQ8NHK3 375 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 RXFP4Q8TDU9 374 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 SLC7A6Q92536 515 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 HIST1H2BAQ96A08 127 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 NUDT9Q9BW91 350 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 CDCA4Q9BXL8 241 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 QTRT1Q9BXR0 403 aaKnown RBP3.17□□□□□ -1.9
UBR3-208ENST00000474426 DSN1Q9H410 356 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 FN3KQ9H479 309 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 EFCAB1Q9HAE3 211 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 SLC2A4RGQ9NR83 387 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 CACNA2D2Q9NY47 1150 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 TAS2R13Q9NYV9 303 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 SLC25A13Q9UJS0 675 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 NAGPAQ9UK23 515 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 AP4S1Q9Y587 144 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 ABCB11O95342 1321 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 GLI2P10070 1586 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 NPIPA5A0A0B4J1W7 369 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 LOC100289279A0A1B0GTE1 492 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 TCRBV5S4A2TA0A5A2 114 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 C21orf140B9A014 251 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 E5RGE8 158 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 NPIPA5E9PKD4 350 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 NPIPA3F8WFD2 350 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 ACOT8O14734 319 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 GSC2O15499 205 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 GNG7O60262 68 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 GJB5O95377 273 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 S1PR4O95977 384 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms