RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 Q96MF0 132 aa13.68□□□□□ -0.22
MRPL55-226ENST00000473066 ZNF317Q96PQ6 595 aaPredicted RBP13.68□□□□□ -0.22
MRPL55-226ENST00000473066 WFDC6Q9BQY6 131 aa13.68□□□□□ -0.22
MRPL55-226ENST00000473066 C1QTNF6Q9BXI9 259 aa13.68□□□□□ -0.22
MRPL55-226ENST00000473066 FKRPQ9H9S5 495 aa13.68□□□□□ -0.22
MRPL55-226ENST00000473066 B3GAT2Q9NPZ5 323 aa13.68□□□□□ -0.22
MRPL55-226ENST00000473066 SLC7A7Q9UM01 511 aa13.68□□□□□ -0.22
MRPL55-226ENST00000473066 SH3GLB1Q9Y371 365 aa13.68□□□□□ -0.22
MRPL55-226ENST00000473066 ACANP16112 2415 aa13.67□□□□□ -0.22
MRPL55-226ENST00000473066 SHISA9B4DS77 424 aa13.67□□□□□ -0.22
MRPL55-226ENST00000473066 COX4I1P13073 169 aa13.67□□□□□ -0.22
MRPL55-226ENST00000473066 PAX7P23759 505 aa13.67□□□□□ -0.22
MRPL55-226ENST00000473066 TAS2R41P59536 307 aa13.67□□□□□ -0.22
MRPL55-226ENST00000473066 LGALS3BPQ08380 585 aa13.67□□□□□ -0.22
MRPL55-226ENST00000473066 PUDPQ08623 228 aa13.67□□□□□ -0.22
MRPL55-226ENST00000473066 NPTX1Q15818 432 aa13.67□□□□□ -0.22
MRPL55-226ENST00000473066 TBRG1Q3YBR2 411 aa13.67□□□□□ -0.22
MRPL55-226ENST00000473066 HIKESHIQ53FT3 197 aa13.67□□□□□ -0.22
MRPL55-226ENST00000473066 DEF8Q6ZN54 512 aa13.67□□□□□ -0.22
MRPL55-226ENST00000473066 SPATA21Q7Z572 469 aa13.67□□□□□ -0.22
MRPL55-226ENST00000473066 KRTAP1-3Q8IUG1 177 aa13.67□□□□□ -0.22
MRPL55-226ENST00000473066 RBM45Q8IUH3 476 aaKnown RBP13.67□□□□□ -0.22
MRPL55-226ENST00000473066 WDR31Q8NA23 367 aa13.67□□□□□ -0.22
MRPL55-226ENST00000473066 OR5J2Q8NH18 312 aa13.67□□□□□ -0.22
MRPL55-226ENST00000473066 LILRB1Q8NHL6 650 aaPredicted RBP13.67□□□□□ -0.22
MRPL55-226ENST00000473066 C18orf12Q96KH6 178 aa13.67□□□□□ -0.22
MRPL55-226ENST00000473066 BDH2Q9BUT1 245 aa13.67□□□□□ -0.22
MRPL55-226ENST00000473066 MOV10Q9HCE1 1003 aaKnown RBP13.67□□□□□ -0.22
MRPL55-226ENST00000473066 MRPL39Q9NYK5 338 aaKnown RBP13.67□□□□□ -0.22
MRPL55-226ENST00000473066 B3GAT1Q9P2W7 334 aa13.67□□□□□ -0.22
MRPL55-226ENST00000473066 NOX1Q9Y5S8 564 aa13.67□□□□□ -0.22
MRPL55-226ENST00000473066 LOC102725191A0A1B0GVB3 256 aa13.66□□□□□ -0.22
MRPL55-226ENST00000473066 ELOVL7A1L3X0 281 aa13.66□□□□□ -0.22
MRPL55-226ENST00000473066 KPNA4O00629 521 aaPredicted RBP13.66□□□□□ -0.22
MRPL55-226ENST00000473066 TRAF3IP2O43734 574 aaPredicted RBP13.66□□□□□ -0.22
MRPL55-226ENST00000473066 UPK3AO75631 287 aa13.66□□□□□ -0.22
MRPL55-226ENST00000473066 SERPINI2O75830 405 aa13.66□□□□□ -0.22
MRPL55-226ENST00000473066 HIST1H2ABP04908 130 aa13.66□□□□□ -0.22
MRPL55-226ENST00000473066 ADORA3P0DMS8 318 aa13.66□□□□□ -0.22
MRPL55-226ENST00000473066 UMPSP11172 480 aa13.66□□□□□ -0.22
MRPL55-226ENST00000473066 AHCYP23526 432 aa13.66□□□□□ -0.22
MRPL55-226ENST00000473066 IFNA8P32881 189 aa13.66□□□□□ -0.22
MRPL55-226ENST00000473066 AGAP6Q5VW22 663 aa13.66□□□□□ -0.22
MRPL55-226ENST00000473066 HIST3H2AQ7L7L0 130 aa13.66□□□□□ -0.22
MRPL55-226ENST00000473066 BIVMQ86UB2 503 aa13.66□□□□□ -0.22
MRPL55-226ENST00000473066 MICU2Q8IYU8 434 aa13.66□□□□□ -0.22
MRPL55-226ENST00000473066 FBXL14Q8N1E6 418 aa13.66□□□□□ -0.22
MRPL55-226ENST00000473066 OR4D11Q8NGI4 311 aa13.66□□□□□ -0.22
MRPL55-226ENST00000473066 IGFBPL1Q8WX77 278 aa13.66□□□□□ -0.22
MRPL55-226ENST00000473066 LZICQ8WZA0 190 aa13.66□□□□□ -0.22
MRPL55-226ENST00000473066 HIST1H2ACQ93077 130 aa13.66□□□□□ -0.22
MRPL55-226ENST00000473066 SLC41A3Q96GZ6 507 aa13.66□□□□□ -0.22
MRPL55-226ENST00000473066 ZNF583Q96ND8 569 aa13.66□□□□□ -0.22
MRPL55-226ENST00000473066 MOGAT1Q96PD6 335 aa13.66□□□□□ -0.22
MRPL55-226ENST00000473066 SLC19A3Q9BZV2 496 aa13.66□□□□□ -0.22
MRPL55-226ENST00000473066 POLR2J2Q9GZM3 115 aaKnown RBP13.66□□□□□ -0.22
MRPL55-226ENST00000473066 FAM107BQ9H098 131 aa13.66□□□□□ -0.22
MRPL55-226ENST00000473066 PCDHAC1Q9H158 963 aa13.66□□□□□ -0.22
MRPL55-226ENST00000473066 POLR2J3Q9H1A7 115 aaKnown RBP13.66□□□□□ -0.22
MRPL55-226ENST00000473066 ZNF701Q9NV72 531 aaPredicted RBP13.66□□□□□ -0.22
MRPL55-226ENST00000473066 ATP23Q9Y6H3 246 aa13.66□□□□□ -0.22
MRPL55-226ENST00000473066 ZNF726A6NNF4 738 aa13.65□□□□□ -0.22
MRPL55-226ENST00000473066 NDUFAB1O14561 156 aa13.65□□□□□ -0.22
MRPL55-226ENST00000473066 GSTA4O15217 222 aa13.65□□□□□ -0.22
MRPL55-226ENST00000473066 SOD3P08294 240 aa13.65□□□□□ -0.22
MRPL55-226ENST00000473066 INHBBP09529 407 aa13.65□□□□□ -0.22
MRPL55-226ENST00000473066 DANCRP0C864 163 aa13.65□□□□□ -0.22
MRPL55-226ENST00000473066 PAX1P15863 534 aa13.65□□□□□ -0.22
MRPL55-226ENST00000473066 CDKN1AP38936 164 aa13.65□□□□□ -0.22
MRPL55-226ENST00000473066 SLC25A3Q00325 362 aa13.65□□□□□ -0.22
MRPL55-226ENST00000473066 SPOCK1Q08629 439 aa13.65□□□□□ -0.22
MRPL55-226ENST00000473066 ETFDHQ16134 617 aa13.65□□□□□ -0.22
MRPL55-226ENST00000473066 CYBRD1Q53TN4 286 aa13.65□□□□□ -0.22
MRPL55-226ENST00000473066 CARD17Q5XLA6 110 aa13.65□□□□□ -0.22
MRPL55-226ENST00000473066 ANKRD16Q6P6B7 361 aa13.65□□□□□ -0.22
MRPL55-226ENST00000473066 NANOGNBQ7Z5D8 188 aa13.65□□□□□ -0.22
MRPL55-226ENST00000473066 ANKK1Q8NFD2 765 aa13.65□□□□□ -0.22
MRPL55-226ENST00000473066 OR6N1Q8NGY5 312 aa13.65□□□□□ -0.22
MRPL55-226ENST00000473066 TPD52L3Q96J77 140 aa13.65□□□□□ -0.22
MRPL55-226ENST00000473066 HS6ST2Q96MM7 605 aa13.65□□□□□ -0.22
MRPL55-226ENST00000473066 OR2M2Q96R28 347 aa13.65□□□□□ -0.22
MRPL55-226ENST00000473066 DHRS9Q9BPW9 319 aa13.65□□□□□ -0.22
MRPL55-226ENST00000473066 ELAC2Q9BQ52 826 aaKnown RBP13.65□□□□□ -0.22
MRPL55-226ENST00000473066 EFCAB1Q9HAE3 211 aa13.65□□□□□ -0.22
MRPL55-226ENST00000473066 NANSQ9NR45 359 aa13.65□□□□□ -0.22
MRPL55-226ENST00000473066 DLL4Q9NR61 685 aa13.65□□□□□ -0.22
MRPL55-226ENST00000473066 USP22Q9UPT9 525 aa13.65□□□□□ -0.22
MRPL55-226ENST00000473066 ALPK2Q86TB3 2170 aa13.64□□□□□ -0.23
MRPL55-226ENST00000473066 A0A096LPE4 126 aa13.64□□□□□ -0.23
MRPL55-226ENST00000473066 A0A1W2PPZ6 126 aa13.64□□□□□ -0.23
MRPL55-226ENST00000473066 FAM171A2A8MVW0 826 aa13.64□□□□□ -0.23
MRPL55-226ENST00000473066 LRRN3E7EW58 273 aa13.64□□□□□ -0.23
MRPL55-226ENST00000473066 C11orf98E9PRG8 122 aa13.64□□□□□ -0.23
MRPL55-226ENST00000473066 H7C1Q1 480 aa13.64□□□□□ -0.23
MRPL55-226ENST00000473066 M0R3G1 203 aa13.64□□□□□ -0.23
MRPL55-226ENST00000473066 ZNF432O94892 652 aa13.64□□□□□ -0.23
MRPL55-226ENST00000473066 OR5F1O95221 314 aa13.64□□□□□ -0.23
MRPL55-226ENST00000473066 CH25HO95992 272 aa13.64□□□□□ -0.23
MRPL55-226ENST00000473066 HPRP00739 348 aa13.64□□□□□ -0.23
MRPL55-226ENST00000473066 HOXB1P14653 301 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms