RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 TRIM64BA6NI03 449 aa0.63□□□□□ -2.31
UBXN4-207ENST00000471246 F8WDY8 70 aa0.63□□□□□ -2.31
UBXN4-207ENST00000471246 RGS16O15492 202 aaPredicted RBP0.63□□□□□ -2.31
UBXN4-207ENST00000471246 RRP8O43159 456 aaKnown RBP0.63□□□□□ -2.31
UBXN4-207ENST00000471246 RBFOX2O43251 390 aaKnown RBP eCLIP0.63□□□□□ -2.31
UBXN4-207ENST00000471246 SCGB2A1O75556 95 aa0.63□□□□□ -2.31
UBXN4-207ENST00000471246 CBR3O75828 277 aa0.63□□□□□ -2.31
UBXN4-207ENST00000471246 BGLAPP02818 100 aa0.63□□□□□ -2.31
UBXN4-207ENST00000471246 ALDOBP05062 364 aa0.63□□□□□ -2.31
UBXN4-207ENST00000471246 CSF3P09919 207 aa0.63□□□□□ -2.31
UBXN4-207ENST00000471246 LINC00869P0C866 280 aa0.63□□□□□ -2.31
UBXN4-207ENST00000471246 POLR2MP0CAP2 368 aa0.63□□□□□ -2.31
UBXN4-207ENST00000471246 GKN3PP0CG01 181 aa0.63□□□□□ -2.31
UBXN4-207ENST00000471246 IGHV3-43DP0DP04 118 aa0.63□□□□□ -2.31
UBXN4-207ENST00000471246 TNNI3P19429 210 aa0.63□□□□□ -2.31
UBXN4-207ENST00000471246 NT5EP21589 574 aa0.63□□□□□ -2.31
UBXN4-207ENST00000471246 CYP2F1P24903 491 aa0.63□□□□□ -2.31
UBXN4-207ENST00000471246 CD34P28906 385 aa0.63□□□□□ -2.31
UBXN4-207ENST00000471246 MAP3K8P41279 467 aa0.63□□□□□ -2.31
UBXN4-207ENST00000471246 GPM6AP51674 278 aa0.63□□□□□ -2.31
UBXN4-207ENST00000471246 NCBP2P52298 156 aaKnown RBP eCLIP0.63□□□□□ -2.31
UBXN4-207ENST00000471246 GMFBP60983 142 aa0.63□□□□□ -2.31
UBXN4-207ENST00000471246 NUCB2P80303 420 aa0.63□□□□□ -2.31
UBXN4-207ENST00000471246 TNFRSF17Q02223 184 aa0.63□□□□□ -2.31
UBXN4-207ENST00000471246 SYCNQ0VAF6 134 aa0.63□□□□□ -2.31
UBXN4-207ENST00000471246 PJVKQ0ZLH3 352 aa0.63□□□□□ -2.31
UBXN4-207ENST00000471246 ASPHQ12797 758 aa0.63□□□□□ -2.31
UBXN4-207ENST00000471246 SLC15A2Q16348 729 aa0.63□□□□□ -2.31
UBXN4-207ENST00000471246 GGTA1PQ4G0N0 100 aa0.63□□□□□ -2.31
UBXN4-207ENST00000471246 TMEM41BQ5BJD5 291 aa0.63□□□□□ -2.31
UBXN4-207ENST00000471246 CARD16Q5EG05 197 aa0.63□□□□□ -2.31
UBXN4-207ENST00000471246 RAET1LQ5VY80 246 aa0.63□□□□□ -2.31
UBXN4-207ENST00000471246 NCR3LG1Q68D85 454 aa0.63□□□□□ -2.31
UBXN4-207ENST00000471246 RAB12Q6IQ22 244 aa0.63□□□□□ -2.31
UBXN4-207ENST00000471246 C1orf94Q6P1W5 598 aa0.63□□□□□ -2.31
UBXN4-207ENST00000471246 KCNIP4Q6PIL6 250 aa0.63□□□□□ -2.31
UBXN4-207ENST00000471246 HSDL2Q6YN16 418 aa0.63□□□□□ -2.31
UBXN4-207ENST00000471246 RIMKLAQ8IXN7 391 aa0.63□□□□□ -2.31
UBXN4-207ENST00000471246 SLC35F2Q8IXU6 374 aa0.63□□□□□ -2.31
UBXN4-207ENST00000471246 LRRC43Q8N309 656 aa0.63□□□□□ -2.31
UBXN4-207ENST00000471246 HDDC3Q8N4P3 179 aa0.63□□□□□ -2.31
UBXN4-207ENST00000471246 ACOT4Q8N9L9 421 aa0.63□□□□□ -2.31
UBXN4-207ENST00000471246 RGP1Q92546 391 aaPredicted RBP0.63□□□□□ -2.31
UBXN4-207ENST00000471246 AURKBQ96GD4 344 aaPredicted RBP0.63□□□□□ -2.31
UBXN4-207ENST00000471246 SH3YL1Q96HL8 342 aaPredicted RBP0.63□□□□□ -2.31
UBXN4-207ENST00000471246 TMEM237Q96Q45 408 aa0.63□□□□□ -2.31
UBXN4-207ENST00000471246 FOXC2Q99958 501 aa0.63□□□□□ -2.31
UBXN4-207ENST00000471246 EDEM2Q9BV94 578 aa0.63□□□□□ -2.31
UBXN4-207ENST00000471246 RIOK2Q9BVS4 552 aaKnown RBP0.63□□□□□ -2.31
UBXN4-207ENST00000471246 TMEM117Q9H0C3 514 aa0.63□□□□□ -2.31
UBXN4-207ENST00000471246 IL26Q9NPH9 171 aa0.63□□□□□ -2.31
UBXN4-207ENST00000471246 ZNF355PQ9NSJ1 428 aa0.63□□□□□ -2.31
UBXN4-207ENST00000471246 HOXC10Q9NYD6 342 aa0.63□□□□□ -2.31
UBXN4-207ENST00000471246 NINJ2Q9NZG7 142 aa0.63□□□□□ -2.31
UBXN4-207ENST00000471246 IL36GQ9NZH8 169 aa0.63□□□□□ -2.31
UBXN4-207ENST00000471246 XCL2Q9UBD3 114 aa0.63□□□□□ -2.31
UBXN4-207ENST00000471246 PIN4Q9Y237 131 aaKnown RBP0.63□□□□□ -2.31
UBXN4-207ENST00000471246 F11RQ9Y624 299 aaKnown RBP0.63□□□□□ -2.31
UBXN4-207ENST00000471246 CEP350Q5VT06 3117 aa0.63□□□□□ -2.31
UBXN4-207ENST00000471246 YEATS2Q9ULM3 1422 aa0.63□□□□□ -2.31
UBXN4-207ENST00000471246 CUL9Q8IWT3 2517 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 TNKS1BP1Q9C0C2 1729 aaKnown RBP0.62□□□□□ -2.31
UBXN4-207ENST00000471246 IGLV3-12A0A075B6K2 115 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 A0A1B0GVX0 72 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 TMEM223A0PJW6 202 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 LRP5LA4QPB2 252 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 A8MUU9 505 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 F5H6K3 240 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 H3BNH8 94 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 OR1F1O43749 312 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 PFKFB2O60825 505 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 TM7SF2O76062 418 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 BAG2O95816 211 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 MT-ND3P03897 115 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 UBTFL1P0CB47 393 aaPredicted RBP0.62□□□□□ -2.31
UBXN4-207ENST00000471246 ARF4P18085 180 aaPredicted RBP0.62□□□□□ -2.31
UBXN4-207ENST00000471246 IMPDH1P20839 514 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 PCMT1P22061 227 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 IL10P22301 178 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 MMP11P24347 488 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 HTR2AP28223 471 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 CCND2P30279 289 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 P2RY1P47900 373 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 GSSP48637 474 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 TDO2P48775 406 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 RAP1AP62834 184 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 SLC7A9P82251 487 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 KLRC3Q07444 240 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 FZD2Q14332 565 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 IGFBP7Q16270 282 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 KRTAP6-3Q3LI67 103 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 TTLL9Q3SXZ7 439 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 ZBED5Q49AG3 693 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 VAX1Q5SQQ9 334 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 ZNF684Q5T5D7 378 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 BEND3Q5T5X7 828 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 GET4Q7L5D6 327 aaPredicted RBP0.62□□□□□ -2.31
UBXN4-207ENST00000471246 WDR86Q86TI4 376 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 BIVMQ86UB2 503 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 THOC6Q86W42 341 aaKnown RBP0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms