RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 HDHD5Q9BXW7 423 aa8.04□□□□□ -1.12
SF3A1-206ENST00000471037 SLCO5A1Q9H2Y9 848 aa8.04□□□□□ -1.12
SF3A1-206ENST00000471037 TMEM27Q9HBJ8 222 aa8.04□□□□□ -1.12
SF3A1-206ENST00000471037 NKX1-2Q9UD57 310 aaPredicted RBP8.04□□□□□ -1.12
SF3A1-206ENST00000471037 ICAM5Q9UMF0 924 aa8.04□□□□□ -1.12
SF3A1-206ENST00000471037 SAMHD1Q9Y3Z3 626 aaKnown RBP8.04□□□□□ -1.12
SF3A1-206ENST00000471037 RTTNQ86VV8 2226 aa8.04□□□□□ -1.12
SF3A1-206ENST00000471037 SONP18583 2426 aaKnown RBP8.03□□□□□ -1.12
SF3A1-206ENST00000471037 MXRA5Q9NR99 2828 aa8.03□□□□□ -1.12
SF3A1-206ENST00000471037 A0A0J9YW62 118 aa8.03□□□□□ -1.12
SF3A1-206ENST00000471037 A0A1W2PRQ8 180 aa8.03□□□□□ -1.12
SF3A1-206ENST00000471037 CPSF4LA6NMK7 179 aaKnown RBP8.03□□□□□ -1.12
SF3A1-206ENST00000471037 J3KTA2 159 aa8.03□□□□□ -1.12
SF3A1-206ENST00000471037 TNFRSF11BO00300 401 aa8.03□□□□□ -1.12
SF3A1-206ENST00000471037 FFAR1O14842 300 aa8.03□□□□□ -1.12
SF3A1-206ENST00000471037 CASQ2O14958 399 aaPredicted RBP8.03□□□□□ -1.12
SF3A1-206ENST00000471037 CD5LO43866 347 aa8.03□□□□□ -1.12
SF3A1-206ENST00000471037 ADAM11O75078 769 aa8.03□□□□□ -1.12
SF3A1-206ENST00000471037 E2F6O75461 281 aa8.03□□□□□ -1.12
SF3A1-206ENST00000471037 GADD45GO95257 159 aa8.03□□□□□ -1.12
SF3A1-206ENST00000471037 NUDT14O95848 222 aa8.03□□□□□ -1.12
SF3A1-206ENST00000471037 IFNA2P01563 188 aa8.03□□□□□ -1.12
SF3A1-206ENST00000471037 TP53P04637 393 aaPredicted RBP8.03□□□□□ -1.12
SF3A1-206ENST00000471037 H1F0P07305 194 aaKnown RBP8.03□□□□□ -1.12
SF3A1-206ENST00000471037 RYKP34925 604 aa8.03□□□□□ -1.12
SF3A1-206ENST00000471037 YAP1P46937 504 aaKnown RBP8.03□□□□□ -1.12
SF3A1-206ENST00000471037 ARHGDIAP52565 204 aa8.03□□□□□ -1.12
SF3A1-206ENST00000471037 HMGA2P52926 109 aa8.03□□□□□ -1.12
SF3A1-206ENST00000471037 HOXC5Q00444 222 aa8.03□□□□□ -1.12
SF3A1-206ENST00000471037 PIN1Q13526 163 aaPredicted RBP8.03□□□□□ -1.12
SF3A1-206ENST00000471037 DGCR6Q14129 220 aa8.03□□□□□ -1.12
SF3A1-206ENST00000471037 TRAM2Q15035 370 aa8.03□□□□□ -1.12
SF3A1-206ENST00000471037 TAB1Q15750 504 aa8.03□□□□□ -1.12
SF3A1-206ENST00000471037 ZNF239Q16600 458 aaKnown RBP8.03□□□□□ -1.12
SF3A1-206ENST00000471037 PLPPR5Q32ZL2 321 aa8.03□□□□□ -1.12
SF3A1-206ENST00000471037 PDSS1Q5T2R2 415 aa8.03□□□□□ -1.12
SF3A1-206ENST00000471037 GTF2IRD2BQ6EKJ0 949 aa8.03□□□□□ -1.12
SF3A1-206ENST00000471037 WBP2NLQ6ICG8 309 aa8.03□□□□□ -1.12
SF3A1-206ENST00000471037 PODNL1Q6PEZ8 512 aa8.03□□□□□ -1.12
SF3A1-206ENST00000471037 SEZ6L2Q6UXD5 910 aa8.03□□□□□ -1.12
SF3A1-206ENST00000471037 TFAP2EQ6VUC0 442 aa8.03□□□□□ -1.12
SF3A1-206ENST00000471037 AMIGO2Q86SJ2 522 aa8.03□□□□□ -1.12
SF3A1-206ENST00000471037 GTF2IRD2Q86UP8 949 aa8.03□□□□□ -1.12
SF3A1-206ENST00000471037 HIPK1Q86Z02 1210 aa8.03□□□□□ -1.12
SF3A1-206ENST00000471037 SVOPLQ8N434 492 aa8.03□□□□□ -1.12
SF3A1-206ENST00000471037 MAPK1IP1LQ8NDC0 245 aa8.03□□□□□ -1.12
SF3A1-206ENST00000471037 ZNF563Q8TA94 476 aa8.03□□□□□ -1.12
SF3A1-206ENST00000471037 RNF128Q8TEB7 428 aa8.03□□□□□ -1.12
SF3A1-206ENST00000471037 DNAJA4Q8WW22 397 aaPredicted RBP8.03□□□□□ -1.12
SF3A1-206ENST00000471037 TMEM234Q8WY98 164 aa8.03□□□□□ -1.12
SF3A1-206ENST00000471037 ST8SIA1Q92185 356 aa8.03□□□□□ -1.12
SF3A1-206ENST00000471037 S100PBPQ96BU1 408 aa8.03□□□□□ -1.12
SF3A1-206ENST00000471037 NRBF2Q96F24 287 aa8.03□□□□□ -1.12
SF3A1-206ENST00000471037 SLC41A3Q96GZ6 507 aa8.03□□□□□ -1.12
SF3A1-206ENST00000471037 KLHL15Q96M94 604 aa8.03□□□□□ -1.12
SF3A1-206ENST00000471037 NPAS1Q99742 590 aa8.03□□□□□ -1.12
SF3A1-206ENST00000471037 USB1Q9BQ65 265 aaKnown RBP8.03□□□□□ -1.12
SF3A1-206ENST00000471037 GRIP2Q9C0E4 1043 aa8.03□□□□□ -1.12
SF3A1-206ENST00000471037 ESRP2Q9H6T0 727 aaKnown RBP8.03□□□□□ -1.12
SF3A1-206ENST00000471037 NMNAT1Q9HAN9 279 aaPredicted RBP8.03□□□□□ -1.12
SF3A1-206ENST00000471037 C12orf10Q9HB07 376 aa8.03□□□□□ -1.12
SF3A1-206ENST00000471037 NTN4Q9HB63 628 aa8.03□□□□□ -1.12
SF3A1-206ENST00000471037 GP6Q9HCN6 339 aa8.03□□□□□ -1.12
SF3A1-206ENST00000471037 NGBQ9NPG2 151 aa8.03□□□□□ -1.12
SF3A1-206ENST00000471037 C8orf4Q9NR00 106 aa8.03□□□□□ -1.12
SF3A1-206ENST00000471037 MED17Q9NVC6 651 aa8.03□□□□□ -1.12
SF3A1-206ENST00000471037 SELENONQ9NZV5 590 aa8.03□□□□□ -1.12
SF3A1-206ENST00000471037 RPS6KB2Q9UBS0 482 aa8.03□□□□□ -1.12
SF3A1-206ENST00000471037 MAGED1Q9Y5V3 778 aaPredicted RBP8.03□□□□□ -1.12
SF3A1-206ENST00000471037 LYVE1Q9Y5Y7 322 aa8.03□□□□□ -1.12
SF3A1-206ENST00000471037 A0A0B4J2E0 115 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 A0A1B0GWA3 101 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 A0A1B0GX12 115 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 RNF212BA8MTL3 300 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 ETV2O00321 342 aaPredicted RBP8.02□□□□□ -1.13
SF3A1-206ENST00000471037 TNFSF11O14788 317 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 CHP2O43745 196 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 GMFGO60234 142 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 IGHV4-39P01824 125 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 CD3EP07766 207 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 PNMTP11086 282 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 ZNF23P17027 643 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 ELK4P28324 431 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 ADH6P28332 368 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 ACVR1BP36896 505 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 CDKN1AP38936 164 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 SLC1A3P43003 542 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 IDH2P48735 452 aaKnown RBP8.02□□□□□ -1.13
SF3A1-206ENST00000471037 ZNF41P51814 821 aaPredicted RBP8.02□□□□□ -1.13
SF3A1-206ENST00000471037 CDH12P55289 794 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 SESN3P58005 492 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 RNPS1Q15287 305 aaKnown RBP8.02□□□□□ -1.13
SF3A1-206ENST00000471037 TRIP10Q15642 601 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 SNCBQ16143 134 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 PGGHGQ32M88 737 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 ZNF672Q499Z4 452 aaPredicted RBP8.02□□□□□ -1.13
SF3A1-206ENST00000471037 ALG10BQ5I7T1 473 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 FGD3Q5JSP0 725 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 TMEM201Q5SNT2 666 aa8.02□□□□□ -1.13
SF3A1-206ENST00000471037 SFRP5Q5T4F7 317 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms