RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 MAGED1Q9Y5V3 778 aaPredicted RBP11.51□□□□□ -0.57
R3HDM1-213ENST00000463230 TEX15Q9BXT5 2789 aa11.51□□□□□ -0.57
R3HDM1-213ENST00000463230 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.5□□□□□ -0.57
R3HDM1-213ENST00000463230 MS4A18H0YCH9 400 aa11.5□□□□□ -0.57
R3HDM1-213ENST00000463230 KRT33AO76009 404 aa11.5□□□□□ -0.57
R3HDM1-213ENST00000463230 MT-ND1P03886 318 aa11.5□□□□□ -0.57
R3HDM1-213ENST00000463230 HOXB1P14653 301 aaPredicted RBP11.5□□□□□ -0.57
R3HDM1-213ENST00000463230 OR1E2P47887 323 aa11.5□□□□□ -0.57
R3HDM1-213ENST00000463230 CLDN17P56750 224 aa11.5□□□□□ -0.57
R3HDM1-213ENST00000463230 GABRA6Q16445 453 aa11.5□□□□□ -0.57
R3HDM1-213ENST00000463230 MS4A18Q3C1V0 323 aa11.5□□□□□ -0.57
R3HDM1-213ENST00000463230 GLYATQ6IB77 296 aa11.5□□□□□ -0.57
R3HDM1-213ENST00000463230 NIPAL3Q6P499 406 aa11.5□□□□□ -0.57
R3HDM1-213ENST00000463230 C20orf204Q6ZNR8 217 aa11.5□□□□□ -0.57
R3HDM1-213ENST00000463230 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.5□□□□□ -0.57
R3HDM1-213ENST00000463230 P3H2Q8IVL5 708 aa11.5□□□□□ -0.57
R3HDM1-213ENST00000463230 MAGEE2Q8TD90 523 aaPredicted RBP11.5□□□□□ -0.57
R3HDM1-213ENST00000463230 TMEM239Q8WW34 195 aa11.5□□□□□ -0.57
R3HDM1-213ENST00000463230 POP5Q969H6 163 aaKnown RBP11.5□□□□□ -0.57
R3HDM1-213ENST00000463230 HSH2DQ96JZ2 352 aa11.5□□□□□ -0.57
R3HDM1-213ENST00000463230 ADAD1Q96M93 576 aaKnown RBP11.5□□□□□ -0.57
R3HDM1-213ENST00000463230 NANSQ9NR45 359 aa11.5□□□□□ -0.57
R3HDM1-213ENST00000463230 DCAF13Q9NV06 445 aaKnown RBP11.5□□□□□ -0.57
R3HDM1-213ENST00000463230 GMPR2Q9P2T1 348 aaKnown RBP11.5□□□□□ -0.57
R3HDM1-213ENST00000463230 CD300AQ9UGN4 299 aa11.5□□□□□ -0.57
R3HDM1-213ENST00000463230 A4GNTQ9UNA3 340 aa11.5□□□□□ -0.57
R3HDM1-213ENST00000463230 MED31Q9Y3C7 131 aa11.5□□□□□ -0.57
R3HDM1-213ENST00000463230 OR6A2O95222 327 aa11.5□□□□□ -0.57
R3HDM1-213ENST00000463230 TNFRSF1BP20333 461 aa11.5□□□□□ -0.57
R3HDM1-213ENST00000463230 TRAM2Q15035 370 aa11.5□□□□□ -0.57
R3HDM1-213ENST00000463230 NCMAPQ5T1S8 102 aa11.5□□□□□ -0.57
R3HDM1-213ENST00000463230 ADAM5Q6NVV9 412 aa11.5□□□□□ -0.57
R3HDM1-213ENST00000463230 KLHL17Q6TDP4 642 aa11.5□□□□□ -0.57
R3HDM1-213ENST00000463230 SEZ6L2Q6UXD5 910 aa11.5□□□□□ -0.57
R3HDM1-213ENST00000463230 DCHS2Q6V1P9 2916 aa11.5□□□□□ -0.57
R3HDM1-213ENST00000463230 NHLRC1Q6VVB1 395 aa11.5□□□□□ -0.57
R3HDM1-213ENST00000463230 FKBP9P1Q75LS8 142 aa11.5□□□□□ -0.57
R3HDM1-213ENST00000463230 FITM2Q8N6M3 262 aa11.5□□□□□ -0.57
R3HDM1-213ENST00000463230 SGTBQ96EQ0 304 aa11.5□□□□□ -0.57
R3HDM1-213ENST00000463230 PIP5K1AQ99755 562 aa11.5□□□□□ -0.57
R3HDM1-213ENST00000463230 MUC13Q9H3R2 512 aa11.5□□□□□ -0.57
R3HDM1-213ENST00000463230 B3GAT2Q9NPZ5 323 aa11.5□□□□□ -0.57
R3HDM1-213ENST00000463230 PDZD2O15018 2839 aa11.49□□□□□ -0.57
R3HDM1-213ENST00000463230 ABCA4P78363 2273 aa11.49□□□□□ -0.57
R3HDM1-213ENST00000463230 OR7A10O76100 309 aa11.49□□□□□ -0.57
R3HDM1-213ENST00000463230 CH25HO95992 272 aa11.49□□□□□ -0.57
R3HDM1-213ENST00000463230 IGHV3-9P01782 118 aa11.49□□□□□ -0.57
R3HDM1-213ENST00000463230 ASAH2BP0C7U1 165 aa11.49□□□□□ -0.57
R3HDM1-213ENST00000463230 CALB2P22676 271 aa11.49□□□□□ -0.57
R3HDM1-213ENST00000463230 HOXC12P31275 282 aa11.49□□□□□ -0.57
R3HDM1-213ENST00000463230 SELENOPP49908 381 aa11.49□□□□□ -0.57
R3HDM1-213ENST00000463230 MXRA7P84157 204 aa11.49□□□□□ -0.57
R3HDM1-213ENST00000463230 IL1RL1Q01638 556 aa11.49□□□□□ -0.57
R3HDM1-213ENST00000463230 PIN1Q13526 163 aaPredicted RBP11.49□□□□□ -0.57
R3HDM1-213ENST00000463230 TSC22D1Q15714 1073 aa11.49□□□□□ -0.57
R3HDM1-213ENST00000463230 ANKDD1AQ495B1 522 aa11.49□□□□□ -0.57
R3HDM1-213ENST00000463230 HDDC2Q7Z4H3 204 aa11.49□□□□□ -0.57
R3HDM1-213ENST00000463230 VTCN1Q7Z7D3 282 aa11.49□□□□□ -0.57
R3HDM1-213ENST00000463230 RNF113BQ8IZP6 322 aaKnown RBP11.49□□□□□ -0.57
R3HDM1-213ENST00000463230 TMEM123Q8N131 208 aa11.49□□□□□ -0.57
R3HDM1-213ENST00000463230 PLPPR2Q96GM1 343 aa11.49□□□□□ -0.57
R3HDM1-213ENST00000463230 OR2M2Q96R28 347 aa11.49□□□□□ -0.57
R3HDM1-213ENST00000463230 FOXC2Q99958 501 aa11.49□□□□□ -0.57
R3HDM1-213ENST00000463230 FNDC11Q9BVV2 318 aa11.49□□□□□ -0.57
R3HDM1-213ENST00000463230 SLC17A5Q9NRA2 495 aa11.49□□□□□ -0.57
R3HDM1-213ENST00000463230 SEC14L4Q9UDX3 406 aa11.49□□□□□ -0.57
R3HDM1-213ENST00000463230 MGAT4BQ9UQ53 548 aa11.49□□□□□ -0.57
R3HDM1-213ENST00000463230 SNX13Q9Y5W8 968 aa11.49□□□□□ -0.57
R3HDM1-213ENST00000463230 SLC25A15Q9Y619 301 aa11.49□□□□□ -0.57
R3HDM1-213ENST00000463230 ENPP4Q9Y6X5 453 aa11.49□□□□□ -0.57
R3HDM1-213ENST00000463230 RAD51DO75771 328 aa11.48□□□□□ -0.57
R3HDM1-213ENST00000463230 ATE1O95260 518 aa11.48□□□□□ -0.57
R3HDM1-213ENST00000463230 WNT11O96014 354 aa11.48□□□□□ -0.57
R3HDM1-213ENST00000463230 HPRP00739 348 aa11.48□□□□□ -0.57
R3HDM1-213ENST00000463230 HMBOX1Q6NT76 420 aa11.48□□□□□ -0.57
R3HDM1-213ENST00000463230 SLC46A3Q7Z3Q1 461 aa11.48□□□□□ -0.57
R3HDM1-213ENST00000463230 NANOGNBQ7Z5D8 188 aa11.48□□□□□ -0.57
R3HDM1-213ENST00000463230 GPR137CQ8N3F9 429 aa11.48□□□□□ -0.57
R3HDM1-213ENST00000463230 RADILQ96JH8 1075 aa11.48□□□□□ -0.57
R3HDM1-213ENST00000463230 CDRT15Q96T59 188 aa11.48□□□□□ -0.57
R3HDM1-213ENST00000463230 MEPEQ9NQ76 525 aaPredicted RBP11.48□□□□□ -0.57
R3HDM1-213ENST00000463230 BEX4Q9NWD9 120 aaPredicted RBP11.48□□□□□ -0.57
R3HDM1-213ENST00000463230 STX18Q9P2W9 335 aaKnown RBP11.48□□□□□ -0.57
R3HDM1-213ENST00000463230 METRNQ9UJH8 293 aa11.48□□□□□ -0.57
R3HDM1-213ENST00000463230 RNF115Q9Y4L5 304 aa11.48□□□□□ -0.57
R3HDM1-213ENST00000463230 RAI1Q7Z5J4 1906 aaPredicted RBP11.48□□□□□ -0.57
R3HDM1-213ENST00000463230 NPIPB13A6NJU9 1138 aa11.48□□□□□ -0.57
R3HDM1-213ENST00000463230 CENPBD1B2RD01 187 aa11.48□□□□□ -0.57
R3HDM1-213ENST00000463230 NPIPB4C9JG80 1138 aa11.48□□□□□ -0.57
R3HDM1-213ENST00000463230 CD3EP07766 207 aa11.48□□□□□ -0.57
R3HDM1-213ENST00000463230 TSPAN19P0C672 248 aa11.48□□□□□ -0.57
R3HDM1-213ENST00000463230 ADORA3P0DMS8 318 aa11.48□□□□□ -0.57
R3HDM1-213ENST00000463230 ITGA2P17301 1181 aa11.48□□□□□ -0.57
R3HDM1-213ENST00000463230 CBLP22681 906 aa11.48□□□□□ -0.57
R3HDM1-213ENST00000463230 UGT2B15P54855 530 aa11.48□□□□□ -0.57
R3HDM1-213ENST00000463230 SLC25A3Q00325 362 aa11.48□□□□□ -0.57
R3HDM1-213ENST00000463230 POU3F1Q03052 451 aaPredicted RBP11.48□□□□□ -0.57
R3HDM1-213ENST00000463230 ACKR1Q16570 336 aa11.48□□□□□ -0.57
R3HDM1-213ENST00000463230 C3orf36Q3SXR2 165 aa11.48□□□□□ -0.57
R3HDM1-213ENST00000463230 KLHL24Q6TFL4 600 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms