RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 FAM46AQ96IP4 442 aaKnown RBP6.56□□□□□ -1.36
SMC3-202ENST00000462899 RAB17Q9H0T7 212 aa6.56□□□□□ -1.36
SMC3-202ENST00000462899 KCNF1Q9H3M0 494 aa6.56□□□□□ -1.36
SMC3-202ENST00000462899 OXSMQ9NWU1 459 aa6.56□□□□□ -1.36
SMC3-202ENST00000462899 ZNF69Q9UC07 566 aa6.56□□□□□ -1.36
SMC3-202ENST00000462899 EPPK1P58107 5090 aaKnown RBP6.56□□□□□ -1.36
SMC3-202ENST00000462899 DNAH7Q8WXX0 4024 aa6.56□□□□□ -1.36
SMC3-202ENST00000462899 IGLV3-9A0A075B6K5 115 aa6.55□□□□□ -1.36
SMC3-202ENST00000462899 VSTM5A8MXK1 200 aa6.55□□□□□ -1.36
SMC3-202ENST00000462899 FTCDNL1E5RQL4 147 aa6.55□□□□□ -1.36
SMC3-202ENST00000462899 FRS3O43559 492 aa6.55□□□□□ -1.36
SMC3-202ENST00000462899 GPIP06744 558 aa6.55□□□□□ -1.36
SMC3-202ENST00000462899 SNRPAP09012 282 aaKnown RBP6.55□□□□□ -1.36
SMC3-202ENST00000462899 H2AFB1P0C5Y9 115 aa6.55□□□□□ -1.36
SMC3-202ENST00000462899 H2AFB2P0C5Z0 115 aa6.55□□□□□ -1.36
SMC3-202ENST00000462899 NAT2P11245 290 aa6.55□□□□□ -1.36
SMC3-202ENST00000462899 CCNA2P20248 432 aa6.55□□□□□ -1.36
SMC3-202ENST00000462899 RPS4Y1P22090 263 aaKnown RBP6.55□□□□□ -1.36
SMC3-202ENST00000462899 FPR2P25090 351 aa6.55□□□□□ -1.36
SMC3-202ENST00000462899 TACR3P29371 465 aa6.55□□□□□ -1.36
SMC3-202ENST00000462899 RYKP34925 604 aa6.55□□□□□ -1.36
SMC3-202ENST00000462899 MAGEB1P43366 347 aa6.55□□□□□ -1.36
SMC3-202ENST00000462899 IDH2P48735 452 aaKnown RBP6.55□□□□□ -1.36
SMC3-202ENST00000462899 DNAJB13P59910 316 aa6.55□□□□□ -1.36
SMC3-202ENST00000462899 KCNJ10P78508 379 aa6.55□□□□□ -1.36
SMC3-202ENST00000462899 ARF1P84077 181 aaKnown RBP6.55□□□□□ -1.36
SMC3-202ENST00000462899 NPRL3Q12980 569 aa6.55□□□□□ -1.36
SMC3-202ENST00000462899 CEACAM7Q14002 265 aa6.55□□□□□ -1.36
SMC3-202ENST00000462899 PTGR1Q14914 329 aa6.55□□□□□ -1.36
SMC3-202ENST00000462899 SLC9A3R2Q15599 337 aa6.55□□□□□ -1.36
SMC3-202ENST00000462899 OR7A5Q15622 319 aa6.55□□□□□ -1.36
SMC3-202ENST00000462899 UGT3A2Q3SY77 523 aa6.55□□□□□ -1.36
SMC3-202ENST00000462899 MMEL1Q495T6 779 aa6.55□□□□□ -1.36
SMC3-202ENST00000462899 ZNF311Q5JNZ3 666 aa6.55□□□□□ -1.36
SMC3-202ENST00000462899 AVPI1Q5T686 147 aa6.55□□□□□ -1.36
SMC3-202ENST00000462899 KANK2Q63ZY3 851 aa6.55□□□□□ -1.36
SMC3-202ENST00000462899 NIPAL3Q6P499 406 aa6.55□□□□□ -1.36
SMC3-202ENST00000462899 LEG1Q6P5S2 330 aa6.55□□□□□ -1.36
SMC3-202ENST00000462899 ZYG11AQ6WRX3 759 aa6.55□□□□□ -1.36
SMC3-202ENST00000462899 ZNF627Q7L945 461 aa6.55□□□□□ -1.36
SMC3-202ENST00000462899 ZNF572Q7Z3I7 529 aaPredicted RBP6.55□□□□□ -1.36
SMC3-202ENST00000462899 GPAT4Q86UL3 456 aa6.55□□□□□ -1.36
SMC3-202ENST00000462899 BCL6BQ8N143 479 aaPredicted RBP6.55□□□□□ -1.36
SMC3-202ENST00000462899 BHLHE22Q8NFJ8 381 aaPredicted RBP6.55□□□□□ -1.36
SMC3-202ENST00000462899 CNOT9Q92600 299 aaKnown RBP6.55□□□□□ -1.36
SMC3-202ENST00000462899 POP5Q969H6 163 aaKnown RBP6.55□□□□□ -1.36
SMC3-202ENST00000462899 RAB39BQ96DA2 213 aa6.55□□□□□ -1.36
SMC3-202ENST00000462899 WDR89Q96FK6 387 aaPredicted RBP6.55□□□□□ -1.36
SMC3-202ENST00000462899 SYT3Q9BQG1 590 aa6.55□□□□□ -1.36
SMC3-202ENST00000462899 RSPO3Q9BXY4 272 aaPredicted RBP6.55□□□□□ -1.36
SMC3-202ENST00000462899 C7orf69Q9H7B7 122 aa6.55□□□□□ -1.36
SMC3-202ENST00000462899 CRLF2Q9HC73 371 aa6.55□□□□□ -1.36
SMC3-202ENST00000462899 GPR35Q9HC97 309 aa6.55□□□□□ -1.36
SMC3-202ENST00000462899 POLE3Q9NRF9 147 aa6.55□□□□□ -1.36
SMC3-202ENST00000462899 PLEK2Q9NYT0 353 aa6.55□□□□□ -1.36
SMC3-202ENST00000462899 B3GAT1Q9P2W7 334 aa6.55□□□□□ -1.36
SMC3-202ENST00000462899 RCE1Q9Y256 329 aa6.55□□□□□ -1.36
SMC3-202ENST00000462899 POLR3KQ9Y2Y1 108 aaPredicted RBP6.55□□□□□ -1.36
SMC3-202ENST00000462899 WIPI2Q9Y4P8 454 aa6.55□□□□□ -1.36
SMC3-202ENST00000462899 DNAJC15Q9Y5T4 150 aa6.55□□□□□ -1.36
SMC3-202ENST00000462899 LYSTQ99698 3801 aa6.55□□□□□ -1.36
SMC3-202ENST00000462899 SACSQ9NZJ4 4579 aa6.54□□□□□ -1.36
SMC3-202ENST00000462899 MEGF11A6BM72 1044 aa6.54□□□□□ -1.36
SMC3-202ENST00000462899 DUXAA6NLW8 204 aa6.54□□□□□ -1.36
SMC3-202ENST00000462899 ZNF99A8MXY4 864 aaPredicted RBP6.54□□□□□ -1.36
SMC3-202ENST00000462899 POC1B-GALNT4F8VUJ3 575 aa6.54□□□□□ -1.36
SMC3-202ENST00000462899 VAMP5O95183 116 aa6.54□□□□□ -1.36
SMC3-202ENST00000462899 GSTA1P08263 222 aa6.54□□□□□ -1.36
SMC3-202ENST00000462899 MATN1P21941 496 aa6.54□□□□□ -1.36
SMC3-202ENST00000462899 ECHS1P30084 290 aa6.54□□□□□ -1.36
SMC3-202ENST00000462899 HPCAL1P37235 193 aa6.54□□□□□ -1.36
SMC3-202ENST00000462899 RPL3P39023 403 aaKnown RBP6.54□□□□□ -1.36
SMC3-202ENST00000462899 CRYBB2P43320 205 aa6.54□□□□□ -1.36
SMC3-202ENST00000462899 KRTAP10-3P60369 221 aa6.54□□□□□ -1.36
SMC3-202ENST00000462899 GNG11P61952 73 aa6.54□□□□□ -1.36
SMC3-202ENST00000462899 EPS8Q12929 822 aa6.54□□□□□ -1.36
SMC3-202ENST00000462899 CEACAM16Q2WEN9 425 aa6.54□□□□□ -1.36
SMC3-202ENST00000462899 FAM153CQ494X1 144 aa6.54□□□□□ -1.36
SMC3-202ENST00000462899 XKR7Q5GH72 579 aa6.54□□□□□ -1.36
SMC3-202ENST00000462899 SAXO2Q658L1 398 aa6.54□□□□□ -1.36
SMC3-202ENST00000462899 C9orf139Q6ZV77 190 aa6.54□□□□□ -1.36
SMC3-202ENST00000462899 C6orf120Q7Z4R8 191 aa6.54□□□□□ -1.36
SMC3-202ENST00000462899 ZNF584Q8IVC4 421 aa6.54□□□□□ -1.36
SMC3-202ENST00000462899 CCDC36Q8IYA8 594 aa6.54□□□□□ -1.36
SMC3-202ENST00000462899 TMEM123Q8N131 208 aa6.54□□□□□ -1.36
SMC3-202ENST00000462899 ARFGAP2Q8N6H7 521 aa6.54□□□□□ -1.36
SMC3-202ENST00000462899 NATD1Q8N6N6 113 aa6.54□□□□□ -1.36
SMC3-202ENST00000462899 CCNYL1Q8N7R7 359 aa6.54□□□□□ -1.36
SMC3-202ENST00000462899 CCDC126Q96EE4 140 aa6.54□□□□□ -1.36
SMC3-202ENST00000462899 OR51I1Q9H343 314 aa6.54□□□□□ -1.36
SMC3-202ENST00000462899 NKIRAS2Q9NYR9 191 aa6.54□□□□□ -1.36
SMC3-202ENST00000462899 NUP50Q9UKX7 468 aa6.54□□□□□ -1.36
SMC3-202ENST00000462899 WDR45Q9Y484 360 aa6.54□□□□□ -1.36
SMC3-202ENST00000462899 RYR2Q92736 4967 aa6.54□□□□□ -1.36
SMC3-202ENST00000462899 C17orf100A8MU93 164 aa6.53□□□□□ -1.36
SMC3-202ENST00000462899 AZIN1O14977 448 aa6.53□□□□□ -1.36
SMC3-202ENST00000462899 SCN2BO60939 215 aa6.53□□□□□ -1.36
SMC3-202ENST00000462899 SKAP2O75563 359 aaPredicted RBP6.53□□□□□ -1.36
SMC3-202ENST00000462899 KRT33AO76009 404 aa6.53□□□□□ -1.36
SMC3-202ENST00000462899 SEC14L2O76054 403 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms