RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 MEPEQ9NQ76 525 aaPredicted RBP9.33□□□□□ -0.92
TRAPPC12-213ENST00000461577 DCAF13Q9NV06 445 aaKnown RBP9.33□□□□□ -0.92
TRAPPC12-213ENST00000461577 B3GAT1Q9P2W7 334 aa9.33□□□□□ -0.92
TRAPPC12-213ENST00000461577 RHCGQ9UBD6 479 aa9.33□□□□□ -0.92
TRAPPC12-213ENST00000461577 ZNF229Q9UJW7 825 aa9.33□□□□□ -0.92
TRAPPC12-213ENST00000461577 RCE1Q9Y256 329 aa9.33□□□□□ -0.92
TRAPPC12-213ENST00000461577 FAM32AQ9Y421 112 aaKnown RBP9.33□□□□□ -0.92
TRAPPC12-213ENST00000461577 SNX13Q9Y5W8 968 aa9.33□□□□□ -0.92
TRAPPC12-213ENST00000461577 V9GYQ6 96 aa9.33□□□□□ -0.92
TRAPPC12-213ENST00000461577 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.32□□□□□ -0.92
TRAPPC12-213ENST00000461577 OR5H1A6NKK0 313 aa9.32□□□□□ -0.92
TRAPPC12-213ENST00000461577 ZNF726A6NNF4 738 aa9.32□□□□□ -0.92
TRAPPC12-213ENST00000461577 ARPC2O15144 300 aa9.32□□□□□ -0.92
TRAPPC12-213ENST00000461577 SIAH2O43255 324 aa9.32□□□□□ -0.92
TRAPPC12-213ENST00000461577 KLF4O43474 513 aa9.32□□□□□ -0.92
TRAPPC12-213ENST00000461577 RNF13O43567 381 aa9.32□□□□□ -0.92
TRAPPC12-213ENST00000461577 TRAF3IP2O43734 574 aaPredicted RBP9.32□□□□□ -0.92
TRAPPC12-213ENST00000461577 SERPINI2O75830 405 aa9.32□□□□□ -0.92
TRAPPC12-213ENST00000461577 OR7A10O76100 309 aa9.32□□□□□ -0.92
TRAPPC12-213ENST00000461577 HPRP00739 348 aa9.32□□□□□ -0.92
TRAPPC12-213ENST00000461577 ITGA5P08648 1049 aa9.32□□□□□ -0.92
TRAPPC12-213ENST00000461577 CDH2P19022 906 aaPredicted RBP9.32□□□□□ -0.92
TRAPPC12-213ENST00000461577 FUT1P19526 365 aa9.32□□□□□ -0.92
TRAPPC12-213ENST00000461577 HOXC12P31275 282 aa9.32□□□□□ -0.92
TRAPPC12-213ENST00000461577 MSX2P35548 267 aaPredicted RBP9.32□□□□□ -0.92
TRAPPC12-213ENST00000461577 FOXG1P55316 489 aaPredicted RBP9.32□□□□□ -0.92
TRAPPC12-213ENST00000461577 ZP4Q12836 540 aa9.32□□□□□ -0.92
TRAPPC12-213ENST00000461577 HMBOX1Q6NT76 420 aa9.32□□□□□ -0.92
TRAPPC12-213ENST00000461577 RINLQ6ZS11 566 aa9.32□□□□□ -0.92
TRAPPC12-213ENST00000461577 RRM2BQ7LG56 351 aa9.32□□□□□ -0.92
TRAPPC12-213ENST00000461577 NANOGNBQ7Z5D8 188 aa9.32□□□□□ -0.92
TRAPPC12-213ENST00000461577 PXKQ7Z7A4 578 aa9.32□□□□□ -0.92
TRAPPC12-213ENST00000461577 ARHGAP24Q8N264 748 aa9.32□□□□□ -0.92
TRAPPC12-213ENST00000461577 LRRC17Q8N6Y2 441 aa9.32□□□□□ -0.92
TRAPPC12-213ENST00000461577 PIK3C3Q8NEB9 887 aa9.32□□□□□ -0.92
TRAPPC12-213ENST00000461577 C1orf162Q8NEQ5 155 aaPredicted RBP9.32□□□□□ -0.92
TRAPPC12-213ENST00000461577 NRGNQ92686 78 aa9.32□□□□□ -0.92
TRAPPC12-213ENST00000461577 PYURFQ96I23 114 aa9.32□□□□□ -0.92
TRAPPC12-213ENST00000461577 LINC00470Q9BZP3 86 aa9.32□□□□□ -0.92
TRAPPC12-213ENST00000461577 B3GAT2Q9NPZ5 323 aa9.32□□□□□ -0.92
TRAPPC12-213ENST00000461577 ITGB1BP2Q9UKP3 347 aa9.32□□□□□ -0.92
TRAPPC12-213ENST00000461577 ENPP4Q9Y6X5 453 aa9.32□□□□□ -0.92
TRAPPC12-213ENST00000461577 ITPR2Q14571 2701 aa9.31□□□□□ -0.92
TRAPPC12-213ENST00000461577 DCHS2Q6V1P9 2916 aa9.31□□□□□ -0.92
TRAPPC12-213ENST00000461577 HTR3EA5X5Y0 456 aa9.31□□□□□ -0.92
TRAPPC12-213ENST00000461577 BLOC1S5-TXNDC5H3BN57 136 aa9.31□□□□□ -0.92
TRAPPC12-213ENST00000461577 PDLIM1O00151 329 aa9.31□□□□□ -0.92
TRAPPC12-213ENST00000461577 PIP5K1CO60331 668 aa9.31□□□□□ -0.92
TRAPPC12-213ENST00000461577 UPK3AO75631 287 aa9.31□□□□□ -0.92
TRAPPC12-213ENST00000461577 ZNF432O94892 652 aa9.31□□□□□ -0.92
TRAPPC12-213ENST00000461577 IGF2P01344 180 aa9.31□□□□□ -0.92
TRAPPC12-213ENST00000461577 CD3EP07766 207 aa9.31□□□□□ -0.92
TRAPPC12-213ENST00000461577 ASAH2BP0C7U1 165 aa9.31□□□□□ -0.92
TRAPPC12-213ENST00000461577 T-ENOLP0DO92 83 aa9.31□□□□□ -0.92
TRAPPC12-213ENST00000461577 IFI30P13284 250 aa9.31□□□□□ -0.92
TRAPPC12-213ENST00000461577 HLA-DOBP13765 273 aa9.31□□□□□ -0.92
TRAPPC12-213ENST00000461577 ITGA2P17301 1181 aa9.31□□□□□ -0.92
TRAPPC12-213ENST00000461577 RHCEP18577 417 aa9.31□□□□□ -0.92
TRAPPC12-213ENST00000461577 DNASE1P24855 282 aa9.31□□□□□ -0.92
TRAPPC12-213ENST00000461577 ROR2Q01974 943 aaKnown RBP9.31□□□□□ -0.92
TRAPPC12-213ENST00000461577 LGALS3BPQ08380 585 aa9.31□□□□□ -0.92
TRAPPC12-213ENST00000461577 CAMK2DQ13557 499 aa9.31□□□□□ -0.92
TRAPPC12-213ENST00000461577 GABRA6Q16445 453 aa9.31□□□□□ -0.92
TRAPPC12-213ENST00000461577 FXNQ16595 210 aa9.31□□□□□ -0.92
TRAPPC12-213ENST00000461577 CARD17Q5XLA6 110 aa9.31□□□□□ -0.92
TRAPPC12-213ENST00000461577 KLHL24Q6TFL4 600 aa9.31□□□□□ -0.92
TRAPPC12-213ENST00000461577 ZNF730Q6ZMV8 503 aa9.31□□□□□ -0.92
TRAPPC12-213ENST00000461577 SLC35D2Q76EJ3 337 aa9.31□□□□□ -0.92
TRAPPC12-213ENST00000461577 SLC46A3Q7Z3Q1 461 aa9.31□□□□□ -0.92
TRAPPC12-213ENST00000461577 CDK20Q8IZL9 346 aa9.31□□□□□ -0.92
TRAPPC12-213ENST00000461577 C17orf78Q8N4C9 275 aa9.31□□□□□ -0.92
TRAPPC12-213ENST00000461577 ANKK1Q8NFD2 765 aa9.31□□□□□ -0.92
TRAPPC12-213ENST00000461577 OR52N5Q8NH56 324 aa9.31□□□□□ -0.92
TRAPPC12-213ENST00000461577 MCUR1Q96AQ8 359 aa9.31□□□□□ -0.92
TRAPPC12-213ENST00000461577 TXNDC15Q96J42 360 aa9.31□□□□□ -0.92
TRAPPC12-213ENST00000461577 MUS81Q96NY9 551 aa9.31□□□□□ -0.92
TRAPPC12-213ENST00000461577 ALKBH3Q96Q83 286 aaPredicted RBP9.31□□□□□ -0.92
TRAPPC12-213ENST00000461577 HS3ST6Q96QI5 342 aa9.31□□□□□ -0.92
TRAPPC12-213ENST00000461577 OR2M2Q96R28 347 aa9.31□□□□□ -0.92
TRAPPC12-213ENST00000461577 EMC6Q9BV81 110 aa9.31□□□□□ -0.92
TRAPPC12-213ENST00000461577 ESRP2Q9H6T0 727 aaKnown RBP9.31□□□□□ -0.92
TRAPPC12-213ENST00000461577 PLEKHF2Q9H8W4 249 aa9.31□□□□□ -0.92
TRAPPC12-213ENST00000461577 UBTD1Q9HAC8 227 aa9.31□□□□□ -0.92
TRAPPC12-213ENST00000461577 C20orf141Q9NUB4 165 aa9.31□□□□□ -0.92
TRAPPC12-213ENST00000461577 MED29Q9NX70 200 aa9.31□□□□□ -0.92
TRAPPC12-213ENST00000461577 TAS2R5Q9NYW4 299 aa9.31□□□□□ -0.92
TRAPPC12-213ENST00000461577 ST6GALNAC2Q9UJ37 374 aa9.31□□□□□ -0.92
TRAPPC12-213ENST00000461577 PRPF19Q9UMS4 504 aaKnown RBP9.31□□□□□ -0.92
TRAPPC12-213ENST00000461577 AMDHD2Q9Y303 409 aa9.31□□□□□ -0.92
TRAPPC12-213ENST00000461577 FBN2P35556 2912 aa9.31□□□□□ -0.92
TRAPPC12-213ENST00000461577 APCP25054 2843 aa9.3□□□□□ -0.92
TRAPPC12-213ENST00000461577 A0A1W2PR80 420 aa9.3□□□□□ -0.92
TRAPPC12-213ENST00000461577 A0A1W2PRG6 482 aa9.3□□□□□ -0.92
TRAPPC12-213ENST00000461577 SLC35F4A4IF30 521 aa9.3□□□□□ -0.92
TRAPPC12-213ENST00000461577 hCG_2039718K7EN88 272 aa9.3□□□□□ -0.92
TRAPPC12-213ENST00000461577 FFAR1O14842 300 aa9.3□□□□□ -0.92
TRAPPC12-213ENST00000461577 STAMBPO95630 424 aa9.3□□□□□ -0.92
TRAPPC12-213ENST00000461577 H1F0P07305 194 aaKnown RBP9.3□□□□□ -0.92
TRAPPC12-213ENST00000461577 SAGP10523 405 aaPredicted RBP9.3□□□□□ -0.92
TRAPPC12-213ENST00000461577 IFNGR1P15260 489 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms