RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 WNT2BQ93097 391 aa12.74□□□□□ -0.37
UBE2D3-210ENST00000453744 POTEKPQ9BYX7 375 aa12.74□□□□□ -0.37
UBE2D3-210ENST00000453744 ZNF350Q9GZX5 532 aa12.74□□□□□ -0.37
UBE2D3-210ENST00000453744 CKLFQ9UBR5 152 aa12.74□□□□□ -0.37
UBE2D3-210ENST00000453744 FBXO4Q9UKT5 387 aa12.74□□□□□ -0.37
UBE2D3-210ENST00000453744 BRCA2P51587 3418 aa12.74□□□□□ -0.37
UBE2D3-210ENST00000453744 MCIDASD6RGH6 385 aa12.73□□□□□ -0.37
UBE2D3-210ENST00000453744 BHLHE40O14503 412 aa12.73□□□□□ -0.37
UBE2D3-210ENST00000453744 TPPPO94811 219 aa12.73□□□□□ -0.37
UBE2D3-210ENST00000453744 ZFPL1O95159 310 aa12.73□□□□□ -0.37
UBE2D3-210ENST00000453744 PAPLNO95428 1278 aa12.73□□□□□ -0.37
UBE2D3-210ENST00000453744 RAB40ALP0C0E4 278 aa12.73□□□□□ -0.37
UBE2D3-210ENST00000453744 CBR1P16152 277 aa12.73□□□□□ -0.37
UBE2D3-210ENST00000453744 ZNF28P17035 718 aa12.73□□□□□ -0.37
UBE2D3-210ENST00000453744 UBE2IP63279 158 aaKnown RBP12.73□□□□□ -0.37
UBE2D3-210ENST00000453744 SLC35D2Q76EJ3 337 aa12.73□□□□□ -0.37
UBE2D3-210ENST00000453744 OVCH1Q7RTY7 1134 aa12.73□□□□□ -0.37
UBE2D3-210ENST00000453744 DPY19L4Q7Z388 723 aa12.73□□□□□ -0.37
UBE2D3-210ENST00000453744 ZNF761Q86XN6 746 aaPredicted RBP12.73□□□□□ -0.37
UBE2D3-210ENST00000453744 CDH26Q8IXH8 852 aa12.73□□□□□ -0.37
UBE2D3-210ENST00000453744 OR5T3Q8NGG3 340 aa12.73□□□□□ -0.37
UBE2D3-210ENST00000453744 RAB40AQ8WXH6 277 aa12.73□□□□□ -0.37
UBE2D3-210ENST00000453744 TOE1Q96GM8 510 aaKnown RBP12.73□□□□□ -0.37
UBE2D3-210ENST00000453744 VRK1Q99986 396 aaPredicted RBP12.73□□□□□ -0.37
UBE2D3-210ENST00000453744 ADAT1Q9BUB4 502 aaKnown RBP12.73□□□□□ -0.37
UBE2D3-210ENST00000453744 ALG12Q9BV10 488 aa12.73□□□□□ -0.37
UBE2D3-210ENST00000453744 OR5V1Q9UGF6 321 aa12.73□□□□□ -0.37
UBE2D3-210ENST00000453744 A0A0G2JK05 382 aa12.73□□□□□ -0.37
UBE2D3-210ENST00000453744 DEFB110Q30KQ9 67 aa12.73□□□□□ -0.37
UBE2D3-210ENST00000453744 DCAF12L2Q5VW00 463 aa12.73□□□□□ -0.37
UBE2D3-210ENST00000453744 RNF113BQ8IZP6 322 aaKnown RBP12.73□□□□□ -0.37
UBE2D3-210ENST00000453744 C3orf49Q96BT1 292 aa12.73□□□□□ -0.37
UBE2D3-210ENST00000453744 MRGPRX3Q96LB0 322 aa12.73□□□□□ -0.37
UBE2D3-210ENST00000453744 RAB11FIP5Q9BXF6 653 aa12.73□□□□□ -0.37
UBE2D3-210ENST00000453744 IL21RQ9HBE5 538 aa12.73□□□□□ -0.37
UBE2D3-210ENST00000453744 XKRYO14609 159 aa12.73□□□□□ -0.37
UBE2D3-210ENST00000453744 NAGAP17050 411 aa12.73□□□□□ -0.37
UBE2D3-210ENST00000453744 P2RY2P41231 377 aa12.73□□□□□ -0.37
UBE2D3-210ENST00000453744 RAG2P55895 527 aa12.73□□□□□ -0.37
UBE2D3-210ENST00000453744 ETFDHQ16134 617 aa12.73□□□□□ -0.37
UBE2D3-210ENST00000453744 PRRT3Q5FWE3 981 aa12.73□□□□□ -0.37
UBE2D3-210ENST00000453744 NHLRC3Q5JS37 347 aa12.73□□□□□ -0.37
UBE2D3-210ENST00000453744 RHOUQ7L0Q8 258 aa12.73□□□□□ -0.37
UBE2D3-210ENST00000453744 SFTPA1Q8IWL2 248 aa12.73□□□□□ -0.37
UBE2D3-210ENST00000453744 C15orf40Q8WUR7 153 aa12.73□□□□□ -0.37
UBE2D3-210ENST00000453744 CAPNS2Q96L46 248 aa12.73□□□□□ -0.37
UBE2D3-210ENST00000453744 TRAV1-2A0A0B4J238 106 aa12.72□□□□□ -0.37
UBE2D3-210ENST00000453744 HIDE1A8MVS5 230 aa12.72□□□□□ -0.37
UBE2D3-210ENST00000453744 C4orf51C9J302 202 aa12.72□□□□□ -0.37
UBE2D3-210ENST00000453744 NFATC1O95644 943 aa12.72□□□□□ -0.37
UBE2D3-210ENST00000453744 HLA-AP01891 365 aaKnown RBP12.72□□□□□ -0.37
UBE2D3-210ENST00000453744 NID1P14543 1247 aa12.72□□□□□ -0.37
UBE2D3-210ENST00000453744 EFNB1P98172 346 aa12.72□□□□□ -0.37
UBE2D3-210ENST00000453744 AIMP2Q13155 320 aaKnown RBP12.72□□□□□ -0.37
UBE2D3-210ENST00000453744 PDSS1Q5T2R2 415 aa12.72□□□□□ -0.37
UBE2D3-210ENST00000453744 SEZ6L2Q6UXD5 910 aa12.72□□□□□ -0.37
UBE2D3-210ENST00000453744 METTL27Q8N6F8 245 aaPredicted RBP12.72□□□□□ -0.37
UBE2D3-210ENST00000453744 PLPP7Q8NBV4 271 aa12.72□□□□□ -0.37
UBE2D3-210ENST00000453744 PHOSPHO1Q8TCT1 267 aa12.72□□□□□ -0.37
UBE2D3-210ENST00000453744 PGLYRP3Q96LB9 341 aa12.72□□□□□ -0.37
UBE2D3-210ENST00000453744 TRIM2Q9C040 744 aa12.72□□□□□ -0.37
UBE2D3-210ENST00000453744 PCDHGA9Q9Y5G4 932 aaKnown RBP12.72□□□□□ -0.37
UBE2D3-210ENST00000453744 RTTNQ86VV8 2226 aa12.72□□□□□ -0.37
UBE2D3-210ENST00000453744 ARPC4-TTLL3A0A0A6YYG9 625 aa12.72□□□□□ -0.37
UBE2D3-210ENST00000453744 TMEM82A0PJX8 343 aa12.72□□□□□ -0.37
UBE2D3-210ENST00000453744 CD2P06729 351 aa12.72□□□□□ -0.37
UBE2D3-210ENST00000453744 SPARCP09486 303 aa12.72□□□□□ -0.37
UBE2D3-210ENST00000453744 GALP22466 123 aa12.72□□□□□ -0.37
UBE2D3-210ENST00000453744 MRM1Q6IN84 353 aaKnown RBP12.72□□□□□ -0.37
UBE2D3-210ENST00000453744 ARMC6Q6NXE6 501 aa12.72□□□□□ -0.37
UBE2D3-210ENST00000453744 CDRT4Q8N9R6 151 aa12.72□□□□□ -0.37
UBE2D3-210ENST00000453744 FAM71CQ8NEG0 241 aa12.72□□□□□ -0.37
UBE2D3-210ENST00000453744 WFIKKN2Q8TEU8 576 aa12.72□□□□□ -0.37
UBE2D3-210ENST00000453744 SMARCD2Q92925 531 aa12.72□□□□□ -0.37
UBE2D3-210ENST00000453744 ZNF75AQ96N20 296 aa12.72□□□□□ -0.37
UBE2D3-210ENST00000453744 CHST6Q9GZX3 395 aa12.72□□□□□ -0.37
UBE2D3-210ENST00000453744 POFUT1Q9H488 388 aa12.72□□□□□ -0.37
UBE2D3-210ENST00000453744 GRHPRQ9UBQ7 328 aa12.72□□□□□ -0.37
UBE2D3-210ENST00000453744 ERVK-19Q9WJR5 959 aa12.72□□□□□ -0.37
UBE2D3-210ENST00000453744 HEATR5BQ9P2D3 2071 aa12.72□□□□□ -0.37
UBE2D3-210ENST00000453744 MFSD2BA6NFX1 497 aa12.72□□□□□ -0.37
UBE2D3-210ENST00000453744 GPRIN2O60269 458 aa12.72□□□□□ -0.37
UBE2D3-210ENST00000453744 POU3F4P49335 361 aa12.72□□□□□ -0.37
UBE2D3-210ENST00000453744 ITPRIPL2Q3MIP1 535 aa12.72□□□□□ -0.37
UBE2D3-210ENST00000453744 C2orf27AQ580R0 203 aa12.72□□□□□ -0.37
UBE2D3-210ENST00000453744 RGS7BPQ6MZT1 257 aaPredicted RBP12.72□□□□□ -0.37
UBE2D3-210ENST00000453744 STEAP1BQ6NZ63 245 aa12.72□□□□□ -0.37
UBE2D3-210ENST00000453744 TMEM205Q6UW68 189 aa12.72□□□□□ -0.37
UBE2D3-210ENST00000453744 STAC2Q6ZMT1 411 aa12.72□□□□□ -0.37
UBE2D3-210ENST00000453744 ZSCAN1Q8NBB4 408 aa12.72□□□□□ -0.37
UBE2D3-210ENST00000453744 OR4D10Q8NGI6 311 aa12.72□□□□□ -0.37
UBE2D3-210ENST00000453744 FAM46BQ96A09 425 aa12.72□□□□□ -0.37
UBE2D3-210ENST00000453744 KLHL15Q96M94 604 aa12.72□□□□□ -0.37
UBE2D3-210ENST00000453744 ELF4Q99607 663 aaPredicted RBP12.72□□□□□ -0.37
UBE2D3-210ENST00000453744 GSKIPQ9P0R6 139 aa12.72□□□□□ -0.37
UBE2D3-210ENST00000453744 OPN4Q9UHM6 478 aa12.72□□□□□ -0.37
UBE2D3-210ENST00000453744 FITM1A5D6W6 292 aa12.71□□□□□ -0.37
UBE2D3-210ENST00000453744 GPR31O00270 319 aa12.71□□□□□ -0.37
UBE2D3-210ENST00000453744 EIF1AYO14602 144 aaKnown RBP12.71□□□□□ -0.37
UBE2D3-210ENST00000453744 LILRB5O75023 590 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms