RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 ZNF441Q8N8Z8 693 aa9.73□□□□□ -0.85
PKP4-206ENST00000452162 FAM98AQ8NCA5 519 aaKnown RBP9.73□□□□□ -0.85
PKP4-206ENST00000452162 PLPP5Q8NEB5 264 aa9.73□□□□□ -0.85
PKP4-206ENST00000452162 GPR87Q9BY21 358 aa9.73□□□□□ -0.85
PKP4-206ENST00000452162 NRIP3Q9NQ35 241 aa9.73□□□□□ -0.85
PKP4-206ENST00000452162 TRIM36Q9NQ86 728 aa9.73□□□□□ -0.85
PKP4-206ENST00000452162 MKL2Q9ULH7 1088 aa9.73□□□□□ -0.85
PKP4-206ENST00000452162 PIEZO2Q9H5I5 2752 aa9.72□□□□□ -0.85
PKP4-206ENST00000452162 SMIM30A4D0T7 59 aa9.72□□□□□ -0.85
PKP4-206ENST00000452162 CD8B2A6NJW9 211 aa9.72□□□□□ -0.85
PKP4-206ENST00000452162 E9PI62 339 aa9.72□□□□□ -0.85
PKP4-206ENST00000452162 K7ENP7 123 aa9.72□□□□□ -0.85
PKP4-206ENST00000452162 KLF7O75840 302 aaPredicted RBP9.72□□□□□ -0.85
PKP4-206ENST00000452162 RGS9O75916 674 aaPredicted RBP9.72□□□□□ -0.85
PKP4-206ENST00000452162 RAB40ALP0C0E4 278 aa9.72□□□□□ -0.85
PKP4-206ENST00000452162 CD8BP10966 210 aa9.72□□□□□ -0.85
PKP4-206ENST00000452162 CD53P19397 219 aa9.72□□□□□ -0.85
PKP4-206ENST00000452162 NR0B1P51843 470 aaKnown RBP9.72□□□□□ -0.85
PKP4-206ENST00000452162 UCNP55089 124 aa9.72□□□□□ -0.85
PKP4-206ENST00000452162 ZNF117Q03924 483 aa9.72□□□□□ -0.85
PKP4-206ENST00000452162 EGR4Q05215 589 aa9.72□□□□□ -0.85
PKP4-206ENST00000452162 GLYR1Q49A26 553 aaPredicted RBP9.72□□□□□ -0.85
PKP4-206ENST00000452162 ATP1A1-AS1Q5TC04 95 aa9.72□□□□□ -0.85
PKP4-206ENST00000452162 INO80CQ6PI98 192 aaPredicted RBP9.72□□□□□ -0.85
PKP4-206ENST00000452162 GPALPP1Q8IXQ4 340 aa9.72□□□□□ -0.85
PKP4-206ENST00000452162 LRRC75AQ8NAA5 344 aa9.72□□□□□ -0.85
PKP4-206ENST00000452162 NPEPL1Q8NDH3 523 aa9.72□□□□□ -0.85
PKP4-206ENST00000452162 OR5W2Q8NH69 310 aa9.72□□□□□ -0.85
PKP4-206ENST00000452162 MOSPD2Q8NHP6 518 aa9.72□□□□□ -0.85
PKP4-206ENST00000452162 SMAP2Q8WU79 429 aaPredicted RBP9.72□□□□□ -0.85
PKP4-206ENST00000452162 NMNAT2Q9BZQ4 307 aa9.72□□□□□ -0.85
PKP4-206ENST00000452162 SRRQ9GZT4 340 aa9.72□□□□□ -0.85
PKP4-206ENST00000452162 C12orf10Q9HB07 376 aa9.72□□□□□ -0.85
PKP4-206ENST00000452162 GPN3Q9UHW5 284 aaPredicted RBP9.72□□□□□ -0.85
PKP4-206ENST00000452162 ZNF229Q9UJW7 825 aa9.72□□□□□ -0.85
PKP4-206ENST00000452162 TCFL5Q9UL49 500 aa9.72□□□□□ -0.85
PKP4-206ENST00000452162 HIF3AQ9Y2N7 669 aa9.72□□□□□ -0.85
PKP4-206ENST00000452162 A0A1W2PQD3 144 aa9.72□□□□□ -0.85
PKP4-206ENST00000452162 A0A1W2PQL4 384 aaPredicted RBP9.72□□□□□ -0.85
PKP4-206ENST00000452162 OR6C76A6NM76 312 aa9.72□□□□□ -0.85
PKP4-206ENST00000452162 DVL2O14641 736 aa9.72□□□□□ -0.85
PKP4-206ENST00000452162 CASKO14936 926 aa9.72□□□□□ -0.85
PKP4-206ENST00000452162 IDH3BO43837 385 aa9.72□□□□□ -0.85
PKP4-206ENST00000452162 TFP02787 698 aa9.72□□□□□ -0.85
PKP4-206ENST00000452162 PRKAR1AP10644 381 aa9.72□□□□□ -0.85
PKP4-206ENST00000452162 SPNP16150 400 aa9.72□□□□□ -0.85
PKP4-206ENST00000452162 IL12BP29460 328 aa9.72□□□□□ -0.85
PKP4-206ENST00000452162 RPL4P36578 427 aaKnown RBP9.72□□□□□ -0.85
PKP4-206ENST00000452162 SLC6A8P48029 635 aa9.72□□□□□ -0.85
PKP4-206ENST00000452162 CAV3P56539 151 aa9.72□□□□□ -0.85
PKP4-206ENST00000452162 PRPS1P60891 318 aa9.72□□□□□ -0.85
PKP4-206ENST00000452162 IL10RAQ13651 578 aa9.72□□□□□ -0.85
PKP4-206ENST00000452162 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.72□□□□□ -0.858e-8■■■■□ 21.3
PKP4-206ENST00000452162 HLA-DQA1Q5Y7H0 255 aa9.72□□□□□ -0.85
PKP4-206ENST00000452162 LANCL3Q6ZV70 420 aa9.72□□□□□ -0.85
PKP4-206ENST00000452162 VASH1Q7L8A9 365 aaPredicted RBP9.72□□□□□ -0.85
PKP4-206ENST00000452162 SSX6Q7RTT6 188 aa9.72□□□□□ -0.85
PKP4-206ENST00000452162 OVCH1Q7RTY7 1134 aa9.72□□□□□ -0.85
PKP4-206ENST00000452162 CADM3Q8N126 398 aa9.72□□□□□ -0.85
PKP4-206ENST00000452162 POMGNT2Q8NAT1 580 aa9.72□□□□□ -0.85
PKP4-206ENST00000452162 NEIL3Q8TAT5 605 aa9.72□□□□□ -0.85
PKP4-206ENST00000452162 AP3S1Q92572 193 aa9.72□□□□□ -0.85
PKP4-206ENST00000452162 ZMYND19Q96E35 227 aaPredicted RBP9.72□□□□□ -0.85
PKP4-206ENST00000452162 C4orf36Q96KX1 117 aa9.72□□□□□ -0.85
PKP4-206ENST00000452162 MOGAT1Q96PD6 335 aa9.72□□□□□ -0.85
PKP4-206ENST00000452162 TGIF2Q9GZN2 237 aa9.72□□□□□ -0.85
PKP4-206ENST00000452162 ADAM19Q9H013 955 aa9.72□□□□□ -0.85
PKP4-206ENST00000452162 COPS7AQ9UBW8 275 aa9.72□□□□□ -0.85
PKP4-206ENST00000452162 IGLV3-12A0A075B6K2 115 aa9.71□□□□□ -0.85
PKP4-206ENST00000452162 CDC14CA4D256 554 aa9.71□□□□□ -0.85
PKP4-206ENST00000452162 ALG1L2C9J202 215 aa9.71□□□□□ -0.85
PKP4-206ENST00000452162 PLPP2O43688 288 aa9.71□□□□□ -0.85
PKP4-206ENST00000452162 ERVK-25P63136 954 aa9.71□□□□□ -0.85
PKP4-206ENST00000452162 LTBQ06643 244 aa9.71□□□□□ -0.85
PKP4-206ENST00000452162 PLCXD2Q0VAA5 305 aa9.71□□□□□ -0.85
PKP4-206ENST00000452162 ZMAT1Q5H9K5 638 aa9.71□□□□□ -0.85
PKP4-206ENST00000452162 DDI2Q5TDH0 399 aa9.71□□□□□ -0.85
PKP4-206ENST00000452162 SHISA6Q6ZSJ9 500 aa9.71□□□□□ -0.85
PKP4-206ENST00000452162 SLC29A4Q7RTT9 530 aa9.71□□□□□ -0.85
PKP4-206ENST00000452162 RFLNBQ8N5W9 214 aa9.71□□□□□ -0.85
PKP4-206ENST00000452162 ZPLD1Q8TCW7 415 aa9.71□□□□□ -0.85
PKP4-206ENST00000452162 ZNRF4Q8WWF5 429 aa9.71□□□□□ -0.85
PKP4-206ENST00000452162 RASD2Q96D21 266 aa9.71□□□□□ -0.85
PKP4-206ENST00000452162 OMA1Q96E52 524 aa9.71□□□□□ -0.85
PKP4-206ENST00000452162 CNN2Q99439 309 aaKnown RBP9.71□□□□□ -0.85
PKP4-206ENST00000452162 RNF32Q9H0A6 362 aa9.71□□□□□ -0.85
PKP4-206ENST00000452162 PRORYQ9H606 182 aa9.71□□□□□ -0.85
PKP4-206ENST00000452162 MMP25Q9NPA2 562 aa9.71□□□□□ -0.85
PKP4-206ENST00000452162 C14orf119Q9NWQ9 140 aa9.71□□□□□ -0.85
PKP4-206ENST00000452162 PTRH2Q9Y3E5 179 aaKnown RBP9.71□□□□□ -0.85
PKP4-206ENST00000452162 NOX1Q9Y5S8 564 aa9.71□□□□□ -0.85
PKP4-206ENST00000452162 PCSK5Q92824 1860 aa9.71□□□□□ -0.85
PKP4-206ENST00000452162 BOD1L1Q8NFC6 3051 aa9.71□□□□□ -0.86
PKP4-206ENST00000452162 OR6C68A6NDL8 312 aa9.71□□□□□ -0.86
PKP4-206ENST00000452162 ZNF891A8MT65 544 aaPredicted RBP9.71□□□□□ -0.86
PKP4-206ENST00000452162 J3QLW9 94 aa9.71□□□□□ -0.86
PKP4-206ENST00000452162 IMPA2O14732 288 aa9.71□□□□□ -0.86
PKP4-206ENST00000452162 NCR1O76036 304 aa9.71□□□□□ -0.86
PKP4-206ENST00000452162 ASAH2BP0C7U1 165 aa9.71□□□□□ -0.86
PKP4-206ENST00000452162 ZNF19P17023 458 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms