RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, human

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSBP3-208	ENST00000444533	KDM8	Q8N371	416 aa		12.51	□□□□□ -0.41
SSBP3-208	ENST00000444533	SLC7A13	Q8TCU3	470 aa		12.51	□□□□□ -0.41
SSBP3-208	ENST00000444533	ALPK1	Q96QP1	1244 aa		12.51	□□□□□ -0.41
SSBP3-208	ENST00000444533	SPOCK3	Q9BQ16	436 aa		12.51	□□□□□ -0.41
SSBP3-208	ENST00000444533	CHID1	Q9BWS9	393 aa		12.51	□□□□□ -0.41
SSBP3-208	ENST00000444533	MCCC2	Q9HCC0	563 aa		12.51	□□□□□ -0.41
SSBP3-208	ENST00000444533	B3GAT2	Q9NPZ5	323 aa		12.51	□□□□□ -0.41
SSBP3-208	ENST00000444533	MAN2C1	Q9NTJ4	1040 aa		12.51	□□□□□ -0.41
SSBP3-208	ENST00000444533	ASB6	Q9NWX5	421 aa		12.51	□□□□□ -0.41
SSBP3-208	ENST00000444533	STX18	Q9P2W9	335 aa	Known RBP	12.51	□□□□□ -0.41
SSBP3-208	ENST00000444533	RCE1	Q9Y256	329 aa		12.51	□□□□□ -0.41
SSBP3-208	ENST00000444533	INTS1	Q8N201	2190 aa	Known RBP	12.51	□□□□□ -0.41
SSBP3-208	ENST00000444533	SPTBN1	Q01082	2364 aa	Known RBP	12.51	□□□□□ -0.41
SSBP3-208	ENST00000444533	MPDZ	O75970	2070 aa		12.5	□□□□□ -0.41
SSBP3-208	ENST00000444533	LRRN3	E7EW58	273 aa		12.5	□□□□□ -0.41
SSBP3-208	ENST00000444533	CASK	O14936	926 aa		12.5	□□□□□ -0.41
SSBP3-208	ENST00000444533	PPP3CB	P16298	524 aa		12.5	□□□□□ -0.41
SSBP3-208	ENST00000444533	MAGEA2	P43356	314 aa		12.5	□□□□□ -0.41
SSBP3-208	ENST00000444533	KIR2DL3	P43628	341 aa		12.5	□□□□□ -0.41
SSBP3-208	ENST00000444533	DAP3	P51398	398 aa	Known RBP	12.5	□□□□□ -0.41
SSBP3-208	ENST00000444533	P2RY4	P51582	365 aa		12.5	□□□□□ -0.41
SSBP3-208	ENST00000444533	PRPS1	P60891	318 aa		12.5	□□□□□ -0.41
SSBP3-208	ENST00000444533	LTB	Q06643	244 aa		12.5	□□□□□ -0.41
SSBP3-208	ENST00000444533	TFF3	Q07654	80 aa		12.5	□□□□□ -0.41
SSBP3-208	ENST00000444533	ZP4	Q12836	540 aa		12.5	□□□□□ -0.41
SSBP3-208	ENST00000444533	FBXW9	Q5XUX1	488 aa		12.5	□□□□□ -0.41
SSBP3-208	ENST00000444533	OR2T5	Q6IEZ7	315 aa		12.5	□□□□□ -0.41
SSBP3-208	ENST00000444533	ASRGL1	Q7L266	308 aa		12.5	□□□□□ -0.41
SSBP3-208	ENST00000444533	GPR137C	Q8N3F9	429 aa		12.5	□□□□□ -0.41
SSBP3-208	ENST00000444533	STEAP2	Q8NFT2	490 aa		12.5	□□□□□ -0.41
SSBP3-208	ENST00000444533	OR4K5	Q8NGD3	323 aa		12.5	□□□□□ -0.41
SSBP3-208	ENST00000444533	OR2T29	Q8NH02	315 aa		12.5	□□□□□ -0.41
SSBP3-208	ENST00000444533	CANT1	Q8WVQ1	401 aa		12.5	□□□□□ -0.41
SSBP3-208	ENST00000444533	LIPH	Q8WWY8	451 aa		12.5	□□□□□ -0.41
SSBP3-208	ENST00000444533	KISS1R	Q969F8	398 aa	Predicted RBP	12.5	□□□□□ -0.41
SSBP3-208	ENST00000444533	DHRS1	Q96LJ7	313 aa		12.5	□□□□□ -0.41
SSBP3-208	ENST00000444533	ADAD1	Q96M93	576 aa	Known RBP	12.5	□□□□□ -0.41
SSBP3-208	ENST00000444533	SLCO5A1	Q9H2Y9	848 aa		12.5	□□□□□ -0.41
SSBP3-208	ENST00000444533	C20orf141	Q9NUB4	165 aa		12.5	□□□□□ -0.41
SSBP3-208	ENST00000444533	SEC14L4	Q9UDX3	406 aa		12.5	□□□□□ -0.41
SSBP3-208	ENST00000444533	ING1	Q9UK53	422 aa	Predicted RBP	12.5	□□□□□ -0.41
SSBP3-208	ENST00000444533	GPR52	Q9Y2T5	361 aa		12.5	□□□□□ -0.41
SSBP3-208	ENST00000444533	SAMHD1	Q9Y3Z3	626 aa	Known RBP	12.5	□□□□□ -0.41
SSBP3-208	ENST00000444533	DOPEY2	Q9Y3R5	2298 aa		12.49	□□□□□ -0.41
SSBP3-208	ENST00000444533	TCRBV3S1	A0A5B6	114 aa		12.49	□□□□□ -0.41
SSBP3-208	ENST00000444533	CIB4	A0PJX0	185 aa		12.49	□□□□□ -0.41
SSBP3-208	ENST00000444533	SH3PXD2B	A1X283	911 aa		12.49	□□□□□ -0.41
SSBP3-208	ENST00000444533	ZNF587B	E7ETH6	402 aa		12.49	□□□□□ -0.41
SSBP3-208	ENST00000444533	MS4A18	H0YCH9	400 aa		12.49	□□□□□ -0.41
SSBP3-208	ENST00000444533	HNRNPR	O43390	633 aa	Known RBP	12.49	□□□□□ -0.41
SSBP3-208	ENST00000444533	PIP5K1C	O60331	668 aa		12.49	□□□□□ -0.41
SSBP3-208	ENST00000444533	E2F6	O75461	281 aa		12.49	□□□□□ -0.41
SSBP3-208	ENST00000444533	CCNB2	O95067	398 aa		12.49	□□□□□ -0.41
SSBP3-208	ENST00000444533	BCL10	O95999	233 aa		12.49	□□□□□ -0.41
SSBP3-208	ENST00000444533	ADA	P00813	363 aa		12.49	□□□□□ -0.41
SSBP3-208	ENST00000444533	HOXC12	P31275	282 aa		12.49	□□□□□ -0.41
SSBP3-208	ENST00000444533	UGT2B10	P36537	528 aa		12.49	□□□□□ -0.41
SSBP3-208	ENST00000444533	RPL4	P36578	427 aa	Known RBP	12.49	□□□□□ -0.41
SSBP3-208	ENST00000444533	GPR4	P46093	362 aa		12.49	□□□□□ -0.41
SSBP3-208	ENST00000444533	ITGAD	Q13349	1161 aa		12.49	□□□□□ -0.41
SSBP3-208	ENST00000444533	MS4A18	Q3C1V0	323 aa		12.49	□□□□□ -0.41
SSBP3-208	ENST00000444533	ALG10	Q5BKT4	473 aa		12.49	□□□□□ -0.41
SSBP3-208	ENST00000444533	ZNF474	Q6S9Z5	364 aa	Predicted RBP	12.49	□□□□□ -0.41
SSBP3-208	ENST00000444533	TBPL2	Q6SJ96	375 aa		12.49	□□□□□ -0.41
SSBP3-208	ENST00000444533	TMPRSS11F	Q6ZWK6	438 aa		12.49	□□□□□ -0.41
SSBP3-208	ENST00000444533	SLC46A3	Q7Z3Q1	461 aa		12.49	□□□□□ -0.41
SSBP3-208	ENST00000444533	ADGRG5	Q8IZF4	528 aa		12.49	□□□□□ -0.41
SSBP3-208	ENST00000444533	LRRC17	Q8N6Y2	441 aa		12.49	□□□□□ -0.41
SSBP3-208	ENST00000444533	FAM46A	Q96IP4	442 aa	Known RBP	12.49	□□□□□ -0.41
SSBP3-208	ENST00000444533	ZNF385A	Q96PM9	386 aa	Known RBP	12.49	□□□□□ -0.41
SSBP3-208	ENST00000444533	MED18	Q9BUE0	208 aa		12.49	□□□□□ -0.41
SSBP3-208	ENST00000444533	INIP	Q9NRY2	104 aa		12.49	□□□□□ -0.41
SSBP3-208	ENST00000444533	ZNF226	Q9NYT6	803 aa		12.49	□□□□□ -0.41
SSBP3-208	ENST00000444533	TRBV4-1	A0A0J9YWV2	114 aa		12.48	□□□□□ -0.41
SSBP3-208	ENST00000444533	IGHV3-9	P01782	118 aa		12.48	□□□□□ -0.41
SSBP3-208	ENST00000444533	FCGR1A	P12314	374 aa		12.48	□□□□□ -0.41
SSBP3-208	ENST00000444533	NR2C1	P13056	603 aa		12.48	□□□□□ -0.41
SSBP3-208	ENST00000444533	PSMB1	P20618	241 aa	Known RBP	12.48	□□□□□ -0.41
SSBP3-208	ENST00000444533	GRN	P28799	593 aa	Known RBP	12.48	□□□□□ -0.41
SSBP3-208	ENST00000444533	DNAJA1	P31689	397 aa	Known RBP	12.48	□□□□□ -0.41
SSBP3-208	ENST00000444533	RPL18	Q07020	188 aa	Known RBP	12.48	□□□□□ -0.41
SSBP3-208	ENST00000444533	FAM27E3	Q08E93	113 aa		12.48	□□□□□ -0.41
SSBP3-208	ENST00000444533	FAP	Q12884	760 aa		12.48	□□□□□ -0.41
SSBP3-208	ENST00000444533	ZBED5	Q49AG3	693 aa		12.48	□□□□□ -0.41
SSBP3-208	ENST00000444533	FBXW10	Q5XX13	1052 aa		12.48	□□□□□ -0.41
SSBP3-208	ENST00000444533	HMBOX1	Q6NT76	420 aa		12.48	□□□□□ -0.41
SSBP3-208	ENST00000444533	SLC35D2	Q76EJ3	337 aa		12.48	□□□□□ -0.41
SSBP3-208	ENST00000444533	SSX8	Q7RTT4	187 aa		12.48	□□□□□ -0.41
SSBP3-208	ENST00000444533	TSEN54	Q7Z6J9	526 aa	Known RBP	12.48	□□□□□ -0.41
SSBP3-208	ENST00000444533	CXorf67	Q86X51	503 aa	Predicted RBP	12.48	□□□□□ -0.41
SSBP3-208	ENST00000444533	EPHX4	Q8IUS5	362 aa		12.48	□□□□□ -0.41
SSBP3-208	ENST00000444533	DMRTC2	Q8IXT2	367 aa	Predicted RBP	12.48	□□□□□ -0.41
SSBP3-208	ENST00000444533	OR6N1	Q8NGY5	312 aa		12.48	□□□□□ -0.41
SSBP3-208	ENST00000444533	OR51A7	Q8NH64	312 aa		12.48	□□□□□ -0.41
SSBP3-208	ENST00000444533	GNPDA2	Q8TDQ7	276 aa		12.48	□□□□□ -0.41
SSBP3-208	ENST00000444533	ENKD1	Q9H0I2	346 aa		12.48	□□□□□ -0.41
SSBP3-208	ENST00000444533	OR10A4	Q9H209	315 aa		12.48	□□□□□ -0.41
SSBP3-208	ENST00000444533	NPDC1	Q9NQX5	325 aa	Predicted RBP	12.48	□□□□□ -0.41
SSBP3-208	ENST00000444533	CCM2L	Q9NUG4	571 aa	Predicted RBP	12.48	□□□□□ -0.41
SSBP3-208	ENST00000444533	TAS2R16	Q9NYV7	291 aa		12.48	□□□□□ -0.41

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