RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 PGLYRP2Q96PD5 576 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 LMF1Q96S06 567 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 ARHGAP9Q9BRR9 750 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 C1QTNF2Q9BXJ5 285 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 FGF20Q9NP95 211 aaPredicted RBP4.78□□□□□ -1.64
SCN11A-202ENST00000444237 UBQLN4Q9NRR5 601 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 PLEKHB1Q9UF11 243 aaPredicted RBP4.78□□□□□ -1.64
SCN11A-202ENST00000444237 MMP24Q9Y5R2 645 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 C7orf77A4D0Y5 90 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 FAM166BA8MTA8 275 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 GPR37O15354 613 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 CNMDO75829 334 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 OR4E1P0C645 316 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 ARAFP10398 606 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 SIM1P81133 766 aaPredicted RBP4.78□□□□□ -1.64
SCN11A-202ENST00000444237 ACSM1Q08AH1 577 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 SMAD4Q13485 552 aaKnown RBP4.78□□□□□ -1.64
SCN11A-202ENST00000444237 PLA1AQ53H76 456 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 ZNF789Q5FWF6 425 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 ACER2Q5QJU3 275 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 ZNF620Q6ZNG0 422 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 ABI3BPQ7Z7G0 1075 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 TCTEX1D1Q8N7M0 179 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 SIGLECL1Q8N7X8 197 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 ZNF461Q8TAF7 563 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 M1APQ8TC57 530 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 PPP1R1CQ8WVI7 109 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 ECHDC3Q96DC8 303 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 APIPQ96GX9 242 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 FAM210BQ96KR6 192 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 TEX37Q96LM6 180 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 ELOVL1Q9BW60 279 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 SGPP1Q9BX95 441 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 SLC35B3Q9H1N7 401 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 GAL3ST2Q9H3Q3 398 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 COL1A1P02452 1464 aaPredicted RBP4.78□□□□□ -1.64
SCN11A-202ENST00000444237 A0A1B0GV72 72 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 LRP5LA4QPB2 252 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 OR6C76A6NM76 312 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 GABRR3A8MPY1 467 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 FZD6O60353 706 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 STK17BO94768 372 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 AIFM1O95831 613 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 APOA2P02652 100 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 AMD1P17707 334 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 OR3A1P47881 315 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 PSEN2P49810 448 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 ZNF136P52737 540 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 ECH1Q13011 328 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 COL9A2Q14055 689 aaPredicted RBP4.78□□□□□ -1.64
SCN11A-202ENST00000444237 LINC00303Q3SY05 128 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 TMEM201Q5SNT2 666 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 MANEALQ5VSG8 457 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 KCTD11Q693B1 232 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 MRM1Q6IN84 353 aaKnown RBP4.78□□□□□ -1.64
SCN11A-202ENST00000444237 SPNS3Q6ZMD2 512 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 TMPRSS7Q7RTY8 843 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 C11orf42Q8N5U0 333 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 SLC35G3Q8N808 338 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 HSD17B11Q8NBQ5 300 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 ZNF439Q8NDP4 499 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 OR8J2Q8NGG1 315 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 LYSMD1Q96S90 227 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 ZNF552Q9H707 407 aaPredicted RBP4.78□□□□□ -1.64
SCN11A-202ENST00000444237 COA4Q9NYJ1 87 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 CLEC4EQ9ULY5 219 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 XKRY2A2RUG3 117 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 CLDN34H7C241 214 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 J3KTA2 159 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 RAB27BO00194 218 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 NDUFS6O75380 124 aaKnown RBP4.78□□□□□ -1.64
SCN11A-202ENST00000444237 KNG1P01042 644 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 CTSLP07711 333 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 HCKP08631 526 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 HOXB5P09067 269 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 MPC1LP0DKB6 136 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 ACP5P13686 325 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 TACR2P21452 398 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 GNRHRP30968 328 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 CASRP41180 1078 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 GUCA2BQ16661 112 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 Q6ZSR9 355 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 THNSL2Q86YJ6 484 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 CARFQ8N187 725 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 CELF5Q8N6W0 485 aaKnown RBP4.78□□□□□ -1.64
SCN11A-202ENST00000444237 ZCCHC10Q8TBK6 192 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 FAM3CQ92520 227 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 TRMT61AQ96FX7 289 aaKnown RBP4.78□□□□□ -1.64
SCN11A-202ENST00000444237 HHIPQ96QV1 700 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 NUDT16L1Q9BRJ7 211 aaKnown RBP4.78□□□□□ -1.64
SCN11A-202ENST00000444237 TUBB1Q9H4B7 451 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 ZDHHC6Q9H6R6 413 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 CNIH4Q9P003 139 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 GNG13Q9P2W3 67 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 UTS2RQ9UKP6 389 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 FBXW2Q9UKT8 454 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 ANKRD36CQ5JPF3 1778 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 LAMA4Q16363 1823 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 DDX60Q8IY21 1712 aaKnown RBP4.78□□□□□ -1.64
SCN11A-202ENST00000444237 MTMR11A4FU01 709 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms