RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 SDC2P34741 201 aa15.07■□□□□ 0
USHBP1-203ENST00000431146 CASP3P42574 277 aa15.07■□□□□ 0
USHBP1-203ENST00000431146 DIO1P49895 249 aa15.07■□□□□ 0
USHBP1-203ENST00000431146 RAB15P59190 212 aa15.07■□□□□ 0
USHBP1-203ENST00000431146 FOXK1P85037 733 aa15.07■□□□□ 0
USHBP1-203ENST00000431146 POU4F2Q12837 409 aa15.07■□□□□ 0
USHBP1-203ENST00000431146 TP53I3Q53FA7 332 aa15.07■□□□□ 0
USHBP1-203ENST00000431146 C6orf15Q6UXA7 325 aaPredicted RBP15.07■□□□□ 0
USHBP1-203ENST00000431146 SLC35F2Q8IXU6 374 aa15.07■□□□□ 0
USHBP1-203ENST00000431146 KDM8Q8N371 416 aa15.07■□□□□ 0
USHBP1-203ENST00000431146 ZNF511Q8NB15 262 aa15.07■□□□□ 0
USHBP1-203ENST00000431146 OR5M1Q8NGP8 315 aa15.07■□□□□ 0
USHBP1-203ENST00000431146 OR5J2Q8NH18 312 aa15.07■□□□□ 0
USHBP1-203ENST00000431146 S100ZQ8WXG8 99 aa15.07■□□□□ 0
USHBP1-203ENST00000431146 WDR12Q9GZL7 423 aaKnown RBP15.07■□□□□ 0
USHBP1-203ENST00000431146 NUAK2Q9H093 628 aa15.07■□□□□ 0
USHBP1-203ENST00000431146 INPP5EQ9NRR6 644 aa15.07■□□□□ 0
USHBP1-203ENST00000431146 WDR70Q9NW82 654 aa15.07■□□□□ 0
USHBP1-203ENST00000431146 FBXL2Q9UKC9 423 aa15.07■□□□□ 0
USHBP1-203ENST00000431146 COPS3Q9UNS2 423 aa15.07■□□□□ 0
USHBP1-203ENST00000431146 SLC6A5Q9Y345 797 aa15.07■□□□□ 0
USHBP1-203ENST00000431146 CNTRLQ7Z7A1 2325 aa15.06■□□□□ 0
USHBP1-203ENST00000431146 EP300Q09472 2414 aaPredicted RBP15.06■□□□□ 0
USHBP1-203ENST00000431146 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.06■□□□□ 0
USHBP1-203ENST00000431146 NSG1A0A0A6YYJ2 146 aa15.06■□□□□ 0
USHBP1-203ENST00000431146 H3BML4 177 aa15.06■□□□□ 0
USHBP1-203ENST00000431146 CTDSP2O14595 271 aa15.06■□□□□ 0
USHBP1-203ENST00000431146 AHSA1O95433 338 aa15.06■□□□□ 0
USHBP1-203ENST00000431146 MT-ND5P03915 603 aa15.06■□□□□ 0
USHBP1-203ENST00000431146 OPN1LWP04000 364 aa15.06■□□□□ 0
USHBP1-203ENST00000431146 E2F1Q01094 437 aa15.06■□□□□ 0
USHBP1-203ENST00000431146 LGALS3BPQ08380 585 aa15.06■□□□□ 0
USHBP1-203ENST00000431146 EXT1Q16394 746 aa15.06■□□□□ 0
USHBP1-203ENST00000431146 LCN1P1Q5VSP4 162 aa15.06■□□□□ 0
USHBP1-203ENST00000431146 ZNF417Q8TAU3 575 aa15.06■□□□□ 0
USHBP1-203ENST00000431146 CT55Q8WUE5 264 aa15.06■□□□□ 0
USHBP1-203ENST00000431146 ST8SIA1Q92185 356 aa15.06■□□□□ 0
USHBP1-203ENST00000431146 ZNF587Q96SQ5 575 aaPredicted RBP15.06■□□□□ 0
USHBP1-203ENST00000431146 ALG12Q9BV10 488 aa15.06■□□□□ 0
USHBP1-203ENST00000431146 CDCP1Q9H5V8 836 aa15.06■□□□□ 0
USHBP1-203ENST00000431146 ZNF318Q5VUA4 2279 aa15.05■□□□□ 0
USHBP1-203ENST00000431146 C9orf172C9J069 976 aa15.05■□□□□ 0
USHBP1-203ENST00000431146 ARHGEF9O43307 516 aa15.05■□□□□ 0
USHBP1-203ENST00000431146 GALR2O43603 387 aaPredicted RBP15.05■□□□□ 0
USHBP1-203ENST00000431146 GPANK1O95872 356 aa15.05■□□□□ 0
USHBP1-203ENST00000431146 HTR3AP46098 478 aa15.05■□□□□ 0
USHBP1-203ENST00000431146 GGTLC2Q14390 218 aa15.05■□□□□ 0
USHBP1-203ENST00000431146 SGCBQ16585 318 aa15.05■□□□□ 0
USHBP1-203ENST00000431146 LINC01590Q5TEZ4 76 aa15.05■□□□□ 0
USHBP1-203ENST00000431146 ARL9Q6T311 187 aa15.05■□□□□ 0
USHBP1-203ENST00000431146 DHRS13Q6UX07 377 aa15.05■□□□□ 0
USHBP1-203ENST00000431146 LINC00299Q6ZSB3 139 aa15.05■□□□□ 0
USHBP1-203ENST00000431146 ARIH2OSQ8N7S6 290 aa15.05■□□□□ 0
USHBP1-203ENST00000431146 KCTD7Q96MP8 289 aa15.05■□□□□ 0
USHBP1-203ENST00000431146 TAAR9Q96RI9 348 aa15.05■□□□□ 0
USHBP1-203ENST00000431146 TMEM9BQ9NQ34 198 aa15.05■□□□□ 0
USHBP1-203ENST00000431146 TRIM36Q9NQ86 728 aa15.05■□□□□ 0
USHBP1-203ENST00000431146 FOXJ2Q9P0K8 574 aa15.05■□□□□ 0
USHBP1-203ENST00000431146 TCFL5Q9UL49 500 aa15.05■□□□□ 0
USHBP1-203ENST00000431146 CHCHD2Q9Y6H1 151 aaPredicted RBP15.05■□□□□ 0
USHBP1-203ENST00000431146 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.05■□□□□ -0
USHBP1-203ENST00000431146 PSMD9O00233 223 aa15.05■□□□□ -0
USHBP1-203ENST00000431146 GABRPO00591 440 aa15.05■□□□□ -0
USHBP1-203ENST00000431146 EFNA2O43921 213 aa15.05■□□□□ -0
USHBP1-203ENST00000431146 MT-ATP6P00846 226 aa15.05■□□□□ -0
USHBP1-203ENST00000431146 NAT2P11245 290 aa15.05■□□□□ -0
USHBP1-203ENST00000431146 APEHP13798 732 aaKnown RBP15.05■□□□□ -0
USHBP1-203ENST00000431146 ZNF41P51814 821 aaPredicted RBP15.05■□□□□ -0
USHBP1-203ENST00000431146 CAV3P56539 151 aa15.05■□□□□ -0
USHBP1-203ENST00000431146 ACTC1P68032 377 aa15.05■□□□□ -0
USHBP1-203ENST00000431146 ACTA1P68133 377 aa15.05■□□□□ -0
USHBP1-203ENST00000431146 OTPQ5XKR4 325 aa15.05■□□□□ -0
USHBP1-203ENST00000431146 CD200R1LQ6Q8B3 271 aa15.05■□□□□ -0
USHBP1-203ENST00000431146 NDUFAF7Q7L592 441 aa15.05■□□□□ -0
USHBP1-203ENST00000431146 VASH1Q7L8A9 365 aaPredicted RBP15.05■□□□□ -0
USHBP1-203ENST00000431146 MARCH9Q86YJ5 346 aa15.05■□□□□ -0
USHBP1-203ENST00000431146 EXD3Q8N9H8 876 aa15.05■□□□□ -0
USHBP1-203ENST00000431146 POMGNT2Q8NAT1 580 aa15.05■□□□□ -0
USHBP1-203ENST00000431146 STK35Q8TDR2 534 aa15.05■□□□□ -0
USHBP1-203ENST00000431146 SYT4Q9H2B2 425 aa15.05■□□□□ -0
USHBP1-203ENST00000431146 TMEM185BQ9H7F4 350 aa15.05■□□□□ -0
USHBP1-203ENST00000431146 CACNA1CQ13936 2221 aa15.04■□□□□ -0
USHBP1-203ENST00000431146 SLC35F4A4IF30 521 aa15.04■□□□□ -0
USHBP1-203ENST00000431146 GLCEO94923 617 aa15.04■□□□□ -0
USHBP1-203ENST00000431146 TXNDC12O95881 172 aa15.04■□□□□ -0
USHBP1-203ENST00000431146 HLA-DOBP13765 273 aa15.04■□□□□ -0
USHBP1-203ENST00000431146 S100A5P33763 92 aa15.04■□□□□ -0
USHBP1-203ENST00000431146 ACVR1BP36896 505 aa15.04■□□□□ -0
USHBP1-203ENST00000431146 RORCP51449 518 aa15.04■□□□□ -0
USHBP1-203ENST00000431146 SUMO3P55854 103 aaPredicted RBP15.04■□□□□ -0
USHBP1-203ENST00000431146 SLC3A1Q07837 685 aa15.04■□□□□ -0
USHBP1-203ENST00000431146 HNRNPA0Q13151 305 aaKnown RBP15.04■□□□□ -0
USHBP1-203ENST00000431146 OR7A5Q15622 319 aa15.04■□□□□ -0
USHBP1-203ENST00000431146 ACKR1Q16570 336 aa15.04■□□□□ -0
USHBP1-203ENST00000431146 GLYR1Q49A26 553 aaPredicted RBP15.04■□□□□ -0
USHBP1-203ENST00000431146 PM20D2Q8IYS1 436 aa15.04■□□□□ -0
USHBP1-203ENST00000431146 OR6V1Q8N148 313 aa15.04■□□□□ -0
USHBP1-203ENST00000431146 M1APQ8TC57 530 aa15.04■□□□□ -0
USHBP1-203ENST00000431146 PCSK5Q92824 1860 aa15.04■□□□□ -0
USHBP1-203ENST00000431146 DMXL1Q9Y485 3027 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms