RNA–Protein interactions for RNA: ENST00000427447.5

LINC00649-203, long intergenic non-protein coding RNA 649, humanhuman

TSL 1 (best) BASIC

Gene LINC00649, Length 9,124 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-203ENST00000427447 PRKAB2O43741 272 aa7.28□□□□□ -1.24
LINC00649-203ENST00000427447 PLK1P53350 603 aa7.28□□□□□ -1.24
LINC00649-203ENST00000427447 MGAT3Q09327 533 aa7.28□□□□□ -1.24
LINC00649-203ENST00000427447 MAMDC4Q6UXC1 1216 aa7.28□□□□□ -1.24
LINC00649-203ENST00000427447 MRPL55Q7Z7F7 128 aaKnown RBP7.28□□□□□ -1.24
LINC00649-203ENST00000427447 ADAMTS15Q8TE58 950 aa7.28□□□□□ -1.24
LINC00649-203ENST00000427447 RPUSD4Q96CM3 377 aaKnown RBP7.28□□□□□ -1.24
LINC00649-203ENST00000427447 SLC35G5Q96KT7 338 aa7.28□□□□□ -1.24
LINC00649-203ENST00000427447 C19orf43Q9BQ61 176 aa7.28□□□□□ -1.24
LINC00649-203ENST00000427447 LHPPQ9H008 270 aa7.28□□□□□ -1.24
LINC00649-203ENST00000427447 ELOVL3Q9HB03 270 aa7.28□□□□□ -1.24
LINC00649-203ENST00000427447 C19orf25Q9UFG5 118 aaPredicted RBP7.28□□□□□ -1.24
LINC00649-203ENST00000427447 FAM205AQ6ZU69 1335 aa7.28□□□□□ -1.24
LINC00649-203ENST00000427447 TRBV11-1A0A0K0K1C0 115 aa7.28□□□□□ -1.24
LINC00649-203ENST00000427447 DUXAA6NLW8 204 aa7.28□□□□□ -1.24
LINC00649-203ENST00000427447 GOSR1O95249 250 aa7.28□□□□□ -1.24
LINC00649-203ENST00000427447 TNFSF10P50591 281 aa7.28□□□□□ -1.24
LINC00649-203ENST00000427447 CCL23P55773 120 aa7.28□□□□□ -1.24
LINC00649-203ENST00000427447 KCNC4Q03721 635 aa7.28□□□□□ -1.24
LINC00649-203ENST00000427447 GANABQ14697 944 aaKnown RBP7.28□□□□□ -1.24
LINC00649-203ENST00000427447 SFRP4Q6FHJ7 346 aaPredicted RBP7.28□□□□□ -1.24
LINC00649-203ENST00000427447 OR52W1Q6IF63 320 aa7.28□□□□□ -1.24
LINC00649-203ENST00000427447 KIAA0907Q7Z7F0 614 aaPredicted RBP7.28□□□□□ -1.24
LINC00649-203ENST00000427447 ZNF563Q8TA94 476 aa7.28□□□□□ -1.24
LINC00649-203ENST00000427447 TUBD1Q9UJT1 453 aa7.28□□□□□ -1.24
LINC00649-203ENST00000427447 CSNK1G3Q9Y6M4 447 aa7.28□□□□□ -1.24
LINC00649-203ENST00000427447 NEO1Q92859 1461 aa7.27□□□□□ -1.24
LINC00649-203ENST00000427447 DIP2AQ14689 1571 aa7.27□□□□□ -1.24
LINC00649-203ENST00000427447 LPOP22079 712 aaPredicted RBP7.27□□□□□ -1.24
LINC00649-203ENST00000427447 GALNSP34059 522 aa7.27□□□□□ -1.24
LINC00649-203ENST00000427447 SRP14P37108 136 aaKnown RBP7.27□□□□□ -1.24
LINC00649-203ENST00000427447 MARCKSL1P49006 195 aa7.27□□□□□ -1.24
LINC00649-203ENST00000427447 PCBP4P57723 403 aaKnown RBP7.27□□□□□ -1.24
LINC00649-203ENST00000427447 EDDM3AQ14507 147 aa7.27□□□□□ -1.24
LINC00649-203ENST00000427447 HBMQ6B0K9 141 aa7.27□□□□□ -1.24
LINC00649-203ENST00000427447 OR1S2Q8NGQ3 325 aa7.27□□□□□ -1.24
LINC00649-203ENST00000427447 TFAP2CQ92754 450 aa7.27□□□□□ -1.24
LINC00649-203ENST00000427447 MUS81Q96NY9 551 aa7.27□□□□□ -1.24
LINC00649-203ENST00000427447 PIPOXQ9P0Z9 390 aa7.27□□□□□ -1.24
LINC00649-203ENST00000427447 CACNG4Q9UBN1 327 aa7.27□□□□□ -1.24
LINC00649-203ENST00000427447 BTRCQ9Y297 605 aa7.27□□□□□ -1.24
LINC00649-203ENST00000427447 TTC24A2A3L6 582 aaPredicted RBP7.27□□□□□ -1.25
LINC00649-203ENST00000427447 GLTPD2A6NH11 291 aa7.27□□□□□ -1.25
LINC00649-203ENST00000427447 BCAT1P54687 386 aa7.27□□□□□ -1.25
LINC00649-203ENST00000427447 SBK1Q52WX2 424 aa7.27□□□□□ -1.25
LINC00649-203ENST00000427447 NR2C2APQ86WQ0 139 aa7.27□□□□□ -1.25
LINC00649-203ENST00000427447 TRAF4Q9BUZ4 470 aaPredicted RBP7.27□□□□□ -1.25
LINC00649-203ENST00000427447 FZD10Q9ULW2 581 aa7.27□□□□□ -1.25
LINC00649-203ENST00000427447 TRBV2A0A0J9YWF9 115 aa7.27□□□□□ -1.25
LINC00649-203ENST00000427447 SLC22A31A6NKX4 558 aa7.27□□□□□ -1.25
LINC00649-203ENST00000427447 CD300LBA8K4G0 201 aa7.27□□□□□ -1.25
LINC00649-203ENST00000427447 FFAR2O15552 330 aa7.27□□□□□ -1.25
LINC00649-203ENST00000427447 B4GALT2O60909 372 aa7.27□□□□□ -1.25
LINC00649-203ENST00000427447 RFX5P48382 616 aaPredicted RBP7.27□□□□□ -1.25
LINC00649-203ENST00000427447 AGTR2P50052 363 aa7.27□□□□□ -1.25
LINC00649-203ENST00000427447 SSX1Q16384 188 aa7.27□□□□□ -1.25
LINC00649-203ENST00000427447 SDHAF4Q5VUM1 108 aa7.27□□□□□ -1.25
LINC00649-203ENST00000427447 PWWP2BQ6NUJ5 590 aa7.27□□□□□ -1.25
LINC00649-203ENST00000427447 CLDN22Q8N7P3 220 aa7.27□□□□□ -1.25
LINC00649-203ENST00000427447 RNF149Q8NC42 400 aa7.27□□□□□ -1.25
LINC00649-203ENST00000427447 OR8B3Q8NGG8 313 aa7.27□□□□□ -1.25
LINC00649-203ENST00000427447 PHYHIPQ92561 330 aa7.27□□□□□ -1.25
LINC00649-203ENST00000427447 R3HDM4Q96D70 268 aa7.27□□□□□ -1.25
LINC00649-203ENST00000427447 NPAS1Q99742 590 aa7.27□□□□□ -1.25
LINC00649-203ENST00000427447 TDP1Q9NUW8 608 aa7.27□□□□□ -1.25
LINC00649-203ENST00000427447 RNF19AQ9NV58 838 aa7.27□□□□□ -1.25
LINC00649-203ENST00000427447 CPNE7Q9UBL6 633 aa7.27□□□□□ -1.25
LINC00649-203ENST00000427447 RIMS1Q86UR5 1692 aaKnown RBP7.27□□□□□ -1.25
LINC00649-203ENST00000427447 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.27□□□□□ -1.25
LINC00649-203ENST00000427447 CDK2AP1O14519 115 aa7.27□□□□□ -1.25
LINC00649-203ENST00000427447 CD37P11049 281 aa7.27□□□□□ -1.25
LINC00649-203ENST00000427447 SRSF9Q13242 221 aaKnown RBP eCLIP7.27□□□□□ -1.25
LINC00649-203ENST00000427447 KCNAB1Q14722 419 aa7.27□□□□□ -1.25
LINC00649-203ENST00000427447 TMPRSS12Q86WS5 348 aa7.27□□□□□ -1.25
LINC00649-203ENST00000427447 ZBTB34Q8NCN2 500 aa7.27□□□□□ -1.25
LINC00649-203ENST00000427447 SLC2A12Q8TD20 617 aa7.27□□□□□ -1.25
LINC00649-203ENST00000427447 BIRC7Q96CA5 298 aa7.27□□□□□ -1.25
LINC00649-203ENST00000427447 SMIM7Q9BQ49 75 aa7.27□□□□□ -1.25
LINC00649-203ENST00000427447 SEMA4BQ9NPR2 832 aaPredicted RBP7.27□□□□□ -1.25
LINC00649-203ENST00000427447 TMED3Q9Y3Q3 217 aa7.27□□□□□ -1.25
LINC00649-203ENST00000427447 NUP188Q5SRE5 1749 aa7.27□□□□□ -1.25
LINC00649-203ENST00000427447 TRPM6Q9BX84 2022 aa7.27□□□□□ -1.25
LINC00649-203ENST00000427447 WDR27A2RRH5 827 aa7.27□□□□□ -1.25
LINC00649-203ENST00000427447 BMP2P12643 396 aa7.27□□□□□ -1.25
LINC00649-203ENST00000427447 GABRA6Q16445 453 aa7.27□□□□□ -1.25
LINC00649-203ENST00000427447 CTF1Q16619 201 aa7.27□□□□□ -1.25
LINC00649-203ENST00000427447 NSUN5P2Q63ZY6 315 aa7.27□□□□□ -1.25
LINC00649-203ENST00000427447 ZNF770Q6IQ21 691 aaPredicted RBP7.27□□□□□ -1.25
LINC00649-203ENST00000427447 OR5M3Q8NGP4 307 aa7.27□□□□□ -1.25
LINC00649-203ENST00000427447 DOK4Q8TEW6 326 aa7.27□□□□□ -1.25
LINC00649-203ENST00000427447 ZFP90Q8TF47 636 aa7.27□□□□□ -1.25
LINC00649-203ENST00000427447 LACRTQ9GZZ8 138 aa7.27□□□□□ -1.25
LINC00649-203ENST00000427447 SLC35B3Q9H1N7 401 aa7.27□□□□□ -1.25
LINC00649-203ENST00000427447 CDC42EP3Q9UKI2 254 aa7.27□□□□□ -1.25
LINC00649-203ENST00000427447 MRPS2Q9Y399 296 aaKnown RBP7.27□□□□□ -1.25
LINC00649-203ENST00000427447 A0A087WZ62 844 aa7.27□□□□□ -1.25
LINC00649-203ENST00000427447 PRSS47A8MTI9 375 aa7.27□□□□□ -1.25
LINC00649-203ENST00000427447 ACTL6BO94805 426 aa7.27□□□□□ -1.25
LINC00649-203ENST00000427447 RPS16P62249 146 aaKnown RBP7.27□□□□□ -1.25
LINC00649-203ENST00000427447 MRGPRX4Q96LA9 322 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms