RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 DUS3LQ96G46 650 aaKnown RBP4.91□□□□□ -1.62
C9orf3-205ENST00000427193 C16orf58Q96GQ5 468 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 STACQ99469 402 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 SH3GL1Q99961 368 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 SLC35A5Q9BS91 424 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 CRB3Q9BUF7 120 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 NUDT9Q9BW91 350 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 PIGUQ9H490 435 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 GORASP2Q9H8Y8 452 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 SDF2L1Q9HCN8 221 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 SEPSECSQ9HD40 501 aaKnown RBP4.91□□□□□ -1.62
C9orf3-205ENST00000427193 MMP25Q9NPA2 562 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 OBP2BQ9NPH6 170 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 GIMAP4Q9NUV9 329 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 POMPQ9Y244 141 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 PTRH2Q9Y3E5 179 aaKnown RBP4.91□□□□□ -1.62
C9orf3-205ENST00000427193 KCNE3Q9Y6H6 103 aa4.91□□□□□ -1.62
C9orf3-205ENST00000427193 NSD1Q96L73 2696 aaPredicted RBP4.9□□□□□ -1.62
C9orf3-205ENST00000427193 IGHV3-20A0A0C4DH32 117 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 TCRBV3S1A0A5B6 114 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 MAGEA13PA6NCF6 341 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 CFAP73A6NFT4 308 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 FAM220BPB1ANY3 271 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 CREG1O75629 220 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 CEACAM4O75871 244 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 KRT75O95678 551 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 EPPINO95925 133 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 IGKV1D-16P01601 117 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 SEMG1P04279 462 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 HEXBP07686 556 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 LYL1P12980 280 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 ETFAP13804 333 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 LIFP15018 202 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 GGT1P19440 569 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 DRD5P21918 477 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 RPS4Y1P22090 263 aaKnown RBP4.9□□□□□ -1.63
C9orf3-205ENST00000427193 PCGF2P35227 344 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 PIGAP37287 484 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 ACTR3P61158 418 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 RPS18P62269 152 aaKnown RBP4.9□□□□□ -1.63
C9orf3-205ENST00000427193 PSPHP78330 225 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 TRAP1Q12931 704 aaKnown RBP4.9□□□□□ -1.63
C9orf3-205ENST00000427193 BNIP2Q12982 314 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 RBM39Q14498 530 aaKnown RBP4.9□□□□□ -1.63
C9orf3-205ENST00000427193 LASP1Q14847 261 aaKnown RBP4.9□□□□□ -1.63
C9orf3-205ENST00000427193 EXOSC7Q15024 291 aaKnown RBP4.9□□□□□ -1.63
C9orf3-205ENST00000427193 ZNF630Q2M218 657 aaPredicted RBP4.9□□□□□ -1.63
C9orf3-205ENST00000427193 EIF2S3LQ2VIR3 472 aaKnown RBP4.9□□□□□ -1.63
C9orf3-205ENST00000427193 BHLHB9Q6PI77 547 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 PAPD4Q6PIY7 484 aaKnown RBP4.9□□□□□ -1.63
C9orf3-205ENST00000427193 SHISA6Q6ZSJ9 500 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 ZNF771Q7L3S4 317 aaPredicted RBP4.9□□□□□ -1.63
C9orf3-205ENST00000427193 NDUFAF7Q7L592 441 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 TSEN54Q7Z6J9 526 aaKnown RBP4.9□□□□□ -1.63
C9orf3-205ENST00000427193 MCEMP1Q8IX19 187 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 CDRT4Q8N9R6 151 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 POC1AQ8NBT0 407 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 ZNF114Q8NC26 417 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 OR52R1Q8NGF1 315 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 OR5AK3PQ8NH89 298 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 M1APQ8TC57 530 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 MAL2Q969L2 176 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 C8orf44Q96CB5 159 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 IP6K3Q96PC2 410 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 DGAT2Q96PD7 388 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 TRNT1Q96Q11 434 aaKnown RBP4.9□□□□□ -1.63
C9orf3-205ENST00000427193 OR7D2Q96RA2 312 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 LPAR4Q99677 370 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 THTPAQ9BU02 230 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 NPFFR1Q9GZQ6 430 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 ZNF350Q9GZX5 532 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 SLC38A1Q9H2H9 487 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 MUC13Q9H3R2 512 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 TRIM45Q9H8W5 580 aaPredicted RBP4.9□□□□□ -1.63
C9orf3-205ENST00000427193 IL1RL2Q9HB29 575 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 FOLH1BQ9HBA9 442 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 C3orf14Q9HBI5 128 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 SH2D2AQ9NP31 389 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 ZCCHC3Q9NUD5 404 aaKnown RBP4.9□□□□□ -1.63
C9orf3-205ENST00000427193 OLAHQ9NV23 265 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 DDX18Q9NVP1 670 aaKnown RBP4.9□□□□□ -1.63
C9orf3-205ENST00000427193 THUMPD1Q9NXG2 353 aaKnown RBP4.9□□□□□ -1.63
C9orf3-205ENST00000427193 P4HTMQ9NXG6 502 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 ACTR3BQ9P1U1 418 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 MALT1Q9UDY8 824 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 PCDHGB4Q9UN71 923 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 DHDHQ9UQ10 334 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 ERVK-19Q9WJR5 959 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 TP53TG5Q9Y2B4 290 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 PADI2Q9Y2J8 665 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 CLCA3PQ9Y6N3 262 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 CCDC88CQ9P219 2028 aa4.9□□□□□ -1.63
C9orf3-205ENST00000427193 ABCA4P78363 2273 aa4.89□□□□□ -1.63
C9orf3-205ENST00000427193 ELOVL7A1L3X0 281 aa4.89□□□□□ -1.63
C9orf3-205ENST00000427193 FRG2CA6NGY1 282 aa4.89□□□□□ -1.63
C9orf3-205ENST00000427193 DUXAA6NLW8 204 aa4.89□□□□□ -1.63
C9orf3-205ENST00000427193 EVPLLA8MZ36 301 aa4.89□□□□□ -1.63
C9orf3-205ENST00000427193 MKRN2OSH3BPM6 223 aa4.89□□□□□ -1.63
C9orf3-205ENST00000427193 ACOX3O15254 700 aa4.89□□□□□ -1.63
C9orf3-205ENST00000427193 KIAA0513O60268 411 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms