RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 ITGA2P17301 1181 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 FUT1P19526 365 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 GRPRP30550 384 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 IFNA8P32881 189 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 OPRM1P35372 400 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 MAGEA2P43356 314 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 SLC16A1P53985 500 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 SIRPAP78324 504 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 PRKCDQ05655 676 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 CHRNB3Q05901 458 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 GABPB1Q06547 395 aaPredicted RBP6.58□□□□□ -1.36
LINC01049-201ENST00000426840 RASGEF1BQ0VAM2 473 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 DGCR6Q14129 220 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 FLOT2Q14254 428 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 MFSD13AQ14CX5 517 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 ZNF74Q16587 644 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 TMEM225Q6GV28 225 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 PPP4R4Q6NUP7 873 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 PODNL1Q6PEZ8 512 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 H1FNTQ75WM6 255 aaPredicted RBP6.58□□□□□ -1.36
LINC01049-201ENST00000426840 SLC46A3Q7Z3Q1 461 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 YTHDF3Q7Z739 585 aaKnown RBP6.58□□□□□ -1.36
LINC01049-201ENST00000426840 CYP4Z1Q86W10 505 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 MCEMP1Q8IX19 187 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 TUSC5Q8IXB3 177 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 RNF113BQ8IZP6 322 aaKnown RBP6.58□□□□□ -1.36
LINC01049-201ENST00000426840 KDM8Q8N371 416 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 LRRC17Q8N6Y2 441 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 ZIC4Q8N9L1 334 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 ZNF610Q8N9Z0 462 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 PAPD5Q8NDF8 572 aaKnown RBP6.58□□□□□ -1.36
LINC01049-201ENST00000426840 PFN4Q8NHR9 129 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 SLC7A13Q8TCU3 470 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 CA5BP1Q8WTZ4 195 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 CANT1Q8WVQ1 401 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 LIPHQ8WWY8 451 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 ACOT11Q8WXI4 607 aaPredicted RBP6.58□□□□□ -1.36
LINC01049-201ENST00000426840 SLCO4A1Q96BD0 722 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 ZHX1-C8orf76Q96EF9 292 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 LRGUKQ96M69 825 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 ZNF347Q96SE7 839 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 EPYCQ99645 322 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 PIP5K1AQ99755 562 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 SFXN3Q9BWM7 321 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 TRIM15Q9C019 465 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 C20orf141Q9NUB4 165 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 KLHL13Q9P2N7 655 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 ICE1Q9Y2F5 2266 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 DOPEY2Q9Y3R5 2298 aa6.58□□□□□ -1.36
LINC01049-201ENST00000426840 HCFC1P51610 2035 aa6.57□□□□□ -1.36
LINC01049-201ENST00000426840 CACNA1CQ13936 2221 aa6.57□□□□□ -1.36
LINC01049-201ENST00000426840 TRBV4-1A0A0J9YWV2 114 aa6.57□□□□□ -1.36
LINC01049-201ENST00000426840 HTR3EA5X5Y0 456 aa6.57□□□□□ -1.36
LINC01049-201ENST00000426840 NKX2-6A6NCS4 301 aa6.57□□□□□ -1.36
LINC01049-201ENST00000426840 ENO4A6NNW6 628 aa6.57□□□□□ -1.36
LINC01049-201ENST00000426840 A8MXE2 369 aa6.57□□□□□ -1.36
LINC01049-201ENST00000426840 KPNA4O00629 521 aaPredicted RBP6.57□□□□□ -1.36
LINC01049-201ENST00000426840 PLPP3O14495 311 aa6.57□□□□□ -1.36
LINC01049-201ENST00000426840 DVL2O14641 736 aa6.57□□□□□ -1.36
LINC01049-201ENST00000426840 PIP5K1CO60331 668 aa6.57□□□□□ -1.36
LINC01049-201ENST00000426840 OR7A10O76100 309 aa6.57□□□□□ -1.36
LINC01049-201ENST00000426840 VAMP5O95183 116 aa6.57□□□□□ -1.36
LINC01049-201ENST00000426840 GADD45GO95257 159 aa6.57□□□□□ -1.36
LINC01049-201ENST00000426840 STAMBPO95630 424 aa6.57□□□□□ -1.36
LINC01049-201ENST00000426840 HPRP00739 348 aa6.57□□□□□ -1.36
LINC01049-201ENST00000426840 MT-ATP6P00846 226 aa6.57□□□□□ -1.36
LINC01049-201ENST00000426840 TSPAN19P0C672 248 aa6.57□□□□□ -1.36
LINC01049-201ENST00000426840 ASAH2BP0C7U1 165 aa6.57□□□□□ -1.36
LINC01049-201ENST00000426840 RAP2AP10114 183 aa6.57□□□□□ -1.36
LINC01049-201ENST00000426840 CD8BP10966 210 aa6.57□□□□□ -1.36
LINC01049-201ENST00000426840 IFI30P13284 250 aa6.57□□□□□ -1.36
LINC01049-201ENST00000426840 MAKP20794 623 aa6.57□□□□□ -1.36
LINC01049-201ENST00000426840 BMP5P22003 454 aa6.57□□□□□ -1.36
LINC01049-201ENST00000426840 EDNRAP25101 427 aa6.57□□□□□ -1.36
LINC01049-201ENST00000426840 AGTR1P30556 359 aa6.57□□□□□ -1.36
LINC01049-201ENST00000426840 RRM2P31350 389 aa6.57□□□□□ -1.36
LINC01049-201ENST00000426840 LIMS1P48059 325 aa6.57□□□□□ -1.36
LINC01049-201ENST00000426840 CTBP2P56545 445 aa6.57□□□□□ -1.36
LINC01049-201ENST00000426840 SMIM11AP58511 58 aa6.57□□□□□ -1.36
LINC01049-201ENST00000426840 TFF3Q07654 80 aa6.57□□□□□ -1.36
LINC01049-201ENST00000426840 ZP4Q12836 540 aa6.57□□□□□ -1.36
LINC01049-201ENST00000426840 CCNIQ14094 377 aa6.57□□□□□ -1.36
LINC01049-201ENST00000426840 SEC23BQ15437 767 aa6.57□□□□□ -1.36
LINC01049-201ENST00000426840 SLC25A35Q3KQZ1 300 aa6.57□□□□□ -1.36
LINC01049-201ENST00000426840 FBXL19-AS1Q494R0 122 aa6.57□□□□□ -1.36
LINC01049-201ENST00000426840 FAM98BQ52LJ0 330 aaKnown RBP6.57□□□□□ -1.36
LINC01049-201ENST00000426840 ZNF474Q6S9Z5 364 aaPredicted RBP6.57□□□□□ -1.36
LINC01049-201ENST00000426840 MBOAT2Q6ZWT7 520 aa6.57□□□□□ -1.36
LINC01049-201ENST00000426840 CREB3L2Q70SY1 520 aa6.57□□□□□ -1.36
LINC01049-201ENST00000426840 MAMDC2Q7Z304 686 aaPredicted RBP6.57□□□□□ -1.36
LINC01049-201ENST00000426840 SPATA24Q86W54 205 aa6.57□□□□□ -1.36
LINC01049-201ENST00000426840 EPHX4Q8IUS5 362 aa6.57□□□□□ -1.36
LINC01049-201ENST00000426840 CNEP1R1Q8N9A8 125 aa6.57□□□□□ -1.36
LINC01049-201ENST00000426840 ADPRHL1Q8NDY3 354 aa6.57□□□□□ -1.36
LINC01049-201ENST00000426840 OR4C15Q8NGM1 316 aa6.57□□□□□ -1.36
LINC01049-201ENST00000426840 OR6K3Q8NGY3 331 aa6.57□□□□□ -1.36
LINC01049-201ENST00000426840 PIGXQ8TBF5 258 aa6.57□□□□□ -1.36
LINC01049-201ENST00000426840 SGTBQ96EQ0 304 aa6.57□□□□□ -1.36
LINC01049-201ENST00000426840 DUS3LQ96G46 650 aaKnown RBP6.57□□□□□ -1.36
LINC01049-201ENST00000426840 OXGR1Q96P68 337 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms