RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 ARID1AO14497 2285 aa18.06■□□□□ 0.48
PKNOX1-202ENST00000418336 PLCE1Q9P212 2302 aa18.05■□□□□ 0.48
PKNOX1-202ENST00000418336 MTORP42345 2549 aa18.05■□□□□ 0.48
PKNOX1-202ENST00000418336 CIB4A0PJX0 185 aa18.05■□□□□ 0.48
PKNOX1-202ENST00000418336 MT-ATP6P00846 226 aa18.05■□□□□ 0.48
PKNOX1-202ENST00000418336 ZNF43P17038 809 aa18.05■□□□□ 0.48
PKNOX1-202ENST00000418336 GSK3BP49841 420 aa18.05■□□□□ 0.48
PKNOX1-202ENST00000418336 GNGT1P63211 74 aa18.05■□□□□ 0.48
PKNOX1-202ENST00000418336 SELENOWP63302 87 aa18.05■□□□□ 0.48
PKNOX1-202ENST00000418336 PIN1Q13526 163 aaPredicted RBP18.05■□□□□ 0.48
PKNOX1-202ENST00000418336 PGGHGQ32M88 737 aa18.05■□□□□ 0.48
PKNOX1-202ENST00000418336 LRRC75A-AS1Q8N1F1 130 aa18.05■□□□□ 0.48
PKNOX1-202ENST00000418336 LRRC17Q8N6Y2 441 aa18.05■□□□□ 0.48
PKNOX1-202ENST00000418336 OR1K1Q8NGR3 316 aa18.05■□□□□ 0.48
PKNOX1-202ENST00000418336 PROX1Q92786 737 aa18.05■□□□□ 0.48
PKNOX1-202ENST00000418336 BCL2L2Q92843 193 aaPredicted RBP18.05■□□□□ 0.48
PKNOX1-202ENST00000418336 TXNDC15Q96J42 360 aa18.05■□□□□ 0.48
PKNOX1-202ENST00000418336 MPP4Q96JB8 637 aa18.05■□□□□ 0.48
PKNOX1-202ENST00000418336 CCL19Q99731 98 aa18.05■□□□□ 0.48
PKNOX1-202ENST00000418336 EFCAB1Q9HAE3 211 aa18.05■□□□□ 0.48
PKNOX1-202ENST00000418336 SELENONQ9NZV5 590 aa18.05■□□□□ 0.48
PKNOX1-202ENST00000418336 AP3M1Q9Y2T2 418 aa18.05■□□□□ 0.48
PKNOX1-202ENST00000418336 OVOL3O00110 214 aa18.04■□□□□ 0.48
PKNOX1-202ENST00000418336 CD3EP07766 207 aa18.04■□□□□ 0.48
PKNOX1-202ENST00000418336 SOD3P08294 240 aa18.04■□□□□ 0.48
PKNOX1-202ENST00000418336 TSPAN19P0C672 248 aa18.04■□□□□ 0.48
PKNOX1-202ENST00000418336 ASAH2BP0C7U1 165 aa18.04■□□□□ 0.48
PKNOX1-202ENST00000418336 GTF2E2P29084 291 aaKnown RBP18.04■□□□□ 0.48
PKNOX1-202ENST00000418336 NUDT2P50583 147 aa18.04■□□□□ 0.48
PKNOX1-202ENST00000418336 UGT2B15P54855 530 aa18.04■□□□□ 0.48
PKNOX1-202ENST00000418336 LSM11P83369 360 aaKnown RBP eCLIP18.04■□□□□ 0.48
PKNOX1-202ENST00000418336 FOXD4Q12950 439 aaPredicted RBP18.04■□□□□ 0.48
PKNOX1-202ENST00000418336 LRRC23Q53EV4 343 aaPredicted RBP18.04■□□□□ 0.48
PKNOX1-202ENST00000418336 HIKESHIQ53FT3 197 aa18.04■□□□□ 0.48
PKNOX1-202ENST00000418336 ANKK1Q8NFD2 765 aa18.04■□□□□ 0.48
PKNOX1-202ENST00000418336 RNF217Q8TC41 542 aa18.04■□□□□ 0.48
PKNOX1-202ENST00000418336 PIGTQ969N2 578 aa18.04■□□□□ 0.48
PKNOX1-202ENST00000418336 MUCL1Q96DR8 90 aa18.04■□□□□ 0.48
PKNOX1-202ENST00000418336 SLC19A3Q9BZV2 496 aa18.04■□□□□ 0.48
PKNOX1-202ENST00000418336 POLR2J2Q9GZM3 115 aaKnown RBP18.04■□□□□ 0.48
PKNOX1-202ENST00000418336 POLR2J3Q9H1A7 115 aaKnown RBP18.04■□□□□ 0.48
PKNOX1-202ENST00000418336 ALG2Q9H553 416 aa18.04■□□□□ 0.48
PKNOX1-202ENST00000418336 NGBQ9NPG2 151 aa18.04■□□□□ 0.48
PKNOX1-202ENST00000418336 MAN2C1Q9NTJ4 1040 aa18.04■□□□□ 0.48
PKNOX1-202ENST00000418336 ZNF701Q9NV72 531 aaPredicted RBP18.04■□□□□ 0.48
PKNOX1-202ENST00000418336 A4GNTQ9UNA3 340 aa18.04■□□□□ 0.48
PKNOX1-202ENST00000418336 USF3Q68DE3 2245 aa18.03■□□□□ 0.48
PKNOX1-202ENST00000418336 OR6C65A6NJZ3 312 aa18.03■□□□□ 0.48
PKNOX1-202ENST00000418336 FFAR1O14842 300 aa18.03■□□□□ 0.48
PKNOX1-202ENST00000418336 CLOCKO15516 846 aa18.03■□□□□ 0.48
PKNOX1-202ENST00000418336 OR5F1O95221 314 aa18.03■□□□□ 0.48
PKNOX1-202ENST00000418336 IGF2P01344 180 aa18.03■□□□□ 0.48
PKNOX1-202ENST00000418336 CD40P25942 277 aa18.03■□□□□ 0.48
PKNOX1-202ENST00000418336 PUDPQ08623 228 aa18.03■□□□□ 0.48
PKNOX1-202ENST00000418336 ZP4Q12836 540 aa18.03■□□□□ 0.48
PKNOX1-202ENST00000418336 C1QTNF12Q5T7M4 302 aa18.03■□□□□ 0.48
PKNOX1-202ENST00000418336 TTC33Q6PID6 262 aaPredicted RBP18.03■□□□□ 0.48
PKNOX1-202ENST00000418336 VTCN1Q7Z7D3 282 aa18.03■□□□□ 0.48
PKNOX1-202ENST00000418336 C20orf196Q8IYI0 205 aa18.03■□□□□ 0.48
PKNOX1-202ENST00000418336 OR5J2Q8NH18 312 aa18.03■□□□□ 0.48
PKNOX1-202ENST00000418336 PFN4Q8NHR9 129 aa18.03■□□□□ 0.48
PKNOX1-202ENST00000418336 TMEM255BQ8WV15 326 aa18.03■□□□□ 0.48
PKNOX1-202ENST00000418336 ASPNQ9BXN1 380 aa18.03■□□□□ 0.48
PKNOX1-202ENST00000418336 GSX2Q9BZM3 304 aa18.03■□□□□ 0.48
PKNOX1-202ENST00000418336 FKRPQ9H9S5 495 aa18.03■□□□□ 0.48
PKNOX1-202ENST00000418336 GPR35Q9HC97 309 aa18.03■□□□□ 0.48
PKNOX1-202ENST00000418336 MED29Q9NX70 200 aa18.03■□□□□ 0.48
PKNOX1-202ENST00000418336 RIMS3Q9UJD0 308 aa18.03■□□□□ 0.48
PKNOX1-202ENST00000418336 SNX13Q9Y5W8 968 aa18.03■□□□□ 0.48
PKNOX1-202ENST00000418336 ZNF503-AS2A6NEH8 195 aa18.02■□□□□ 0.48
PKNOX1-202ENST00000418336 ZNF587BE7ETH6 402 aa18.02■□□□□ 0.48
PKNOX1-202ENST00000418336 CXCR6O00574 342 aa18.02■□□□□ 0.48
PKNOX1-202ENST00000418336 ABCD4O14678 606 aa18.02■□□□□ 0.48
PKNOX1-202ENST00000418336 PRSS23O95084 383 aa18.02■□□□□ 0.48
PKNOX1-202ENST00000418336 CH25HO95992 272 aa18.02■□□□□ 0.48
PKNOX1-202ENST00000418336 CD8AP01732 235 aa18.02■□□□□ 0.48
PKNOX1-202ENST00000418336 ZNF83P51522 516 aa18.02■□□□□ 0.48
PKNOX1-202ENST00000418336 PSME3P61289 254 aa18.02■□□□□ 0.48
PKNOX1-202ENST00000418336 ROR2Q01974 943 aaKnown RBP18.02■□□□□ 0.48
PKNOX1-202ENST00000418336 POU3F1Q03052 451 aaPredicted RBP18.02■□□□□ 0.48
PKNOX1-202ENST00000418336 PMS2P3Q13401 168 aa18.02■□□□□ 0.48
PKNOX1-202ENST00000418336 FXNQ16595 210 aa18.02■□□□□ 0.48
PKNOX1-202ENST00000418336 TBRG1Q3YBR2 411 aa18.02■□□□□ 0.48
PKNOX1-202ENST00000418336 B3GLCTQ6Y288 498 aa18.02■□□□□ 0.48
PKNOX1-202ENST00000418336 DEF8Q6ZN54 512 aa18.02■□□□□ 0.48
PKNOX1-202ENST00000418336 CBLL1Q75N03 491 aa18.02■□□□□ 0.48
PKNOX1-202ENST00000418336 PXKQ7Z7A4 578 aa18.02■□□□□ 0.48
PKNOX1-202ENST00000418336 UEVLDQ8IX04 471 aa18.02■□□□□ 0.48
PKNOX1-202ENST00000418336 MAGEE2Q8TD90 523 aaPredicted RBP18.02■□□□□ 0.48
PKNOX1-202ENST00000418336 CMTM5Q96DZ9 223 aa18.02■□□□□ 0.48
PKNOX1-202ENST00000418336 EMC6Q9BV81 110 aa18.02■□□□□ 0.48
PKNOX1-202ENST00000418336 C20orf141Q9NUB4 165 aa18.02■□□□□ 0.48
PKNOX1-202ENST00000418336 FAM53CQ9NYF3 392 aa18.02■□□□□ 0.48
PKNOX1-202ENST00000418336 ZNF229Q9UJW7 825 aa18.02■□□□□ 0.48
PKNOX1-202ENST00000418336 AMDHD2Q9Y303 409 aa18.02■□□□□ 0.48
PKNOX1-202ENST00000418336 ARPC4-TTLL3A0A0A6YYG9 625 aa18.01■□□□□ 0.47
PKNOX1-202ENST00000418336 KPNA4O00629 521 aaPredicted RBP18.01■□□□□ 0.47
PKNOX1-202ENST00000418336 IFNA14P01570 189 aa18.01■□□□□ 0.47
PKNOX1-202ENST00000418336 RBM34P42696 430 aaKnown RBP18.01■□□□□ 0.47
PKNOX1-202ENST00000418336 TGFBR3Q03167 851 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms