RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 CT45A1Q5HYN5 189 aa10.4□□□□□ -0.74
PTCH1-205ENST00000418258 COMMD7Q86VX2 200 aa10.4□□□□□ -0.74
PTCH1-205ENST00000418258 OR2T35Q8NGX2 323 aa10.4□□□□□ -0.74
PTCH1-205ENST00000418258 CT45A3Q8NHU0 189 aa10.4□□□□□ -0.74
PTCH1-205ENST00000418258 CCDC74AQ96AQ1 378 aa10.4□□□□□ -0.74
PTCH1-205ENST00000418258 ELSPBP1Q96BH3 223 aa10.4□□□□□ -0.74
PTCH1-205ENST00000418258 RAB3CQ96E17 227 aa10.4□□□□□ -0.74
PTCH1-205ENST00000418258 CENPOQ9BU64 300 aa10.4□□□□□ -0.74
PTCH1-205ENST00000418258 ACSS1Q9NUB1 689 aaPredicted RBP10.4□□□□□ -0.74
PTCH1-205ENST00000418258 HS3ST2Q9Y278 367 aa10.4□□□□□ -0.74
PTCH1-205ENST00000418258 TMED7-TICAM2A0A0A6YYA0 188 aa10.4□□□□□ -0.75
PTCH1-205ENST00000418258 C17orf112F2Z3M2 114 aa10.4□□□□□ -0.75
PTCH1-205ENST00000418258 EFSO43281 561 aa10.4□□□□□ -0.75
PTCH1-205ENST00000418258 CDK4P11802 303 aa10.4□□□□□ -0.75
PTCH1-205ENST00000418258 C5orf46Q6UWT4 87 aa10.4□□□□□ -0.75
PTCH1-205ENST00000418258 ANKRD13BQ86YJ7 626 aa10.4□□□□□ -0.75
PTCH1-205ENST00000418258 COQ10AQ96MF6 247 aa10.4□□□□□ -0.75
PTCH1-205ENST00000418258 SAMD10Q9BYL1 202 aa10.4□□□□□ -0.75
PTCH1-205ENST00000418258 ZBP1Q9H171 429 aa10.4□□□□□ -0.75
PTCH1-205ENST00000418258 TMED7Q9Y3B3 224 aa10.4□□□□□ -0.75
PTCH1-205ENST00000418258 KRBA1A5PL33 1030 aa10.4□□□□□ -0.75
PTCH1-205ENST00000418258 PRAMEF25A6NGN4 478 aa10.4□□□□□ -0.75
PTCH1-205ENST00000418258 SORBS2O94875 1100 aaKnown RBP10.4□□□□□ -0.75
PTCH1-205ENST00000418258 RAB13P51153 203 aa10.4□□□□□ -0.75
PTCH1-205ENST00000418258 HNF4GQ14541 408 aa10.4□□□□□ -0.75
PTCH1-205ENST00000418258 SLC9A3R2Q15599 337 aa10.4□□□□□ -0.75
PTCH1-205ENST00000418258 CST9Q5W186 159 aa10.4□□□□□ -0.75
PTCH1-205ENST00000418258 C18orf63Q68DL7 685 aa10.4□□□□□ -0.75
PTCH1-205ENST00000418258 C1QTNF6Q9BXI9 259 aa10.4□□□□□ -0.75
PTCH1-205ENST00000418258 GPATCH2Q9NW75 528 aa10.4□□□□□ -0.75
PTCH1-205ENST00000418258 ASB4Q9Y574 426 aa10.4□□□□□ -0.75
PTCH1-205ENST00000418258 TMEM72A0PK05 275 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 NXPH3O95157 252 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 GM2AP17900 193 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 BAXQ07812 192 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 MFAP5Q13361 173 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 CAMK2BQ13554 666 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 ZNF468Q5VIY5 522 aaPredicted RBP10.39□□□□□ -0.75
PTCH1-205ENST00000418258 FAM111BQ6SJ93 734 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 C3orf49Q96BT1 292 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 ELMOD3Q96FG2 381 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 CSNK1G1Q9HCP0 422 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 TREX1Q9NSU2 369 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 NDRG3Q9UGV2 375 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 PRELID3BQ9Y3B1 194 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 LGALS8O00214 317 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 HSD17B6O14756 317 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 HS3ST1O14792 307 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 OMGP23515 440 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 OR8G1Q15617 311 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 C6orf89Q6UWU4 347 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 RBMS3Q6XE24 437 aaKnown RBP10.39□□□□□ -0.75
PTCH1-205ENST00000418258 TFAP2CQ92754 450 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 TMEM9BQ9NQ34 198 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 SSUH2Q9Y2M2 353 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 HS3ST3A1Q9Y663 406 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 SPINT2O43291 252 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 ALOX12BO75342 701 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 RPS17P08708 135 aaKnown RBP10.39□□□□□ -0.75
PTCH1-205ENST00000418258 RGRP47804 291 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 OR5AS1Q8N127 324 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 ST7LQ8TDW4 575 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 TRIB1Q96RU8 372 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 MMP28Q9H239 520 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 UBE2ZQ9H832 354 aaPredicted RBP10.39□□□□□ -0.75
PTCH1-205ENST00000418258 ADAMTS5Q9UNA0 930 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 C1orf196B1AJZ1 125 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 HCRTR1O43613 425 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 CLDN1O95832 211 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 CA5AP35218 305 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 DEFB109BQ30KR1 87 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 APOOLQ6UXV4 268 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 LINC00346Q8IVM7 164 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 RNF113BQ8IZP6 322 aaKnown RBP10.39□□□□□ -0.75
PTCH1-205ENST00000418258 TMEM185AQ8NFB2 350 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 OR10X1Q8NGY0 326 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 KHSRPQ92945 711 aaKnown RBP eCLIP10.39□□□□□ -0.75
PTCH1-205ENST00000418258 APH1AQ96BI3 265 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 ZNF419Q96HQ0 510 aaPredicted RBP10.39□□□□□ -0.75
PTCH1-205ENST00000418258 MED18Q9BUE0 208 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 P2RY12Q9H244 342 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 SMCO4Q9NRQ5 59 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 COL16A1Q07092 1604 aaPredicted RBP10.39□□□□□ -0.75
PTCH1-205ENST00000418258 NCR1O76036 304 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 GPR85P60893 370 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 OR6T1Q8NGN1 323 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 ELF4Q99607 663 aaPredicted RBP10.39□□□□□ -0.75
PTCH1-205ENST00000418258 PHF7Q9BWX1 381 aaPredicted RBP10.39□□□□□ -0.75
PTCH1-205ENST00000418258 FOXQ1Q9C009 403 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 ARRDC1-AS1Q9H2J1 176 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 KIAA1456Q9P272 454 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 TRAV36DV7A0A075B6V5 113 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 IMPA2O14732 288 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 GPX3P22352 226 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 FGFBP1Q14512 234 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 DUSP7Q16829 419 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 METAP1DQ6UB28 335 aaPredicted RBP10.39□□□□□ -0.75
PTCH1-205ENST00000418258 MARCH3Q86UD3 253 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 SPPL3Q8TCT6 385 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 DEDD2Q8WXF8 326 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms