RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 SEC14L4Q9UDX3 406 aa13.12□□□□□ -0.31
SGCE-202ENST00000415788 V9GYH0 126 aa13.12□□□□□ -0.31
SGCE-202ENST00000415788 IQCMA0A1B0GVH7 501 aa13.12□□□□□ -0.31
SGCE-202ENST00000415788 TMEM229AB2RXF0 380 aa13.12□□□□□ -0.31
SGCE-202ENST00000415788 SEC14L5O43304 696 aa13.12□□□□□ -0.31
SGCE-202ENST00000415788 GMFGO60234 142 aa13.12□□□□□ -0.31
SGCE-202ENST00000415788 FMO6PO60774 539 aa13.12□□□□□ -0.31
SGCE-202ENST00000415788 GKN3PP0CG01 181 aa13.12□□□□□ -0.31
SGCE-202ENST00000415788 EIF1P41567 113 aaKnown RBP13.12□□□□□ -0.31
SGCE-202ENST00000415788 TOMM20Q15388 145 aa13.12□□□□□ -0.31
SGCE-202ENST00000415788 FAM209AQ5JX71 171 aa13.12□□□□□ -0.31
SGCE-202ENST00000415788 RNFT1Q5M7Z0 435 aa13.12□□□□□ -0.31
SGCE-202ENST00000415788 COMTD1Q86VU5 262 aa13.12□□□□□ -0.31
SGCE-202ENST00000415788 RDH10Q8IZV5 341 aa13.12□□□□□ -0.31
SGCE-202ENST00000415788 CISD2Q8N5K1 135 aaKnown RBP13.12□□□□□ -0.31
SGCE-202ENST00000415788 NR4A3Q92570 626 aa13.12□□□□□ -0.31
SGCE-202ENST00000415788 NEDD4LQ96PU5 975 aa13.12□□□□□ -0.31
SGCE-202ENST00000415788 TRAF4Q9BUZ4 470 aaPredicted RBP13.12□□□□□ -0.31
SGCE-202ENST00000415788 MED17Q9NVC6 651 aa13.12□□□□□ -0.31
SGCE-202ENST00000415788 TAS2R10Q9NYW0 307 aa13.12□□□□□ -0.31
SGCE-202ENST00000415788 ARRDC5A6NEK1 342 aa13.11□□□□□ -0.31
SGCE-202ENST00000415788 CCDC182A6NF36 153 aa13.11□□□□□ -0.31
SGCE-202ENST00000415788 TTLL8A6PVC2 850 aa13.11□□□□□ -0.31
SGCE-202ENST00000415788 ETV2O00321 342 aaPredicted RBP13.11□□□□□ -0.31
SGCE-202ENST00000415788 GPX5O75715 221 aa13.11□□□□□ -0.31
SGCE-202ENST00000415788 TRAPPC6AO75865 159 aa13.11□□□□□ -0.31
SGCE-202ENST00000415788 CCNB2O95067 398 aa13.11□□□□□ -0.31
SGCE-202ENST00000415788 HK1P19367 917 aa13.11□□□□□ -0.31
SGCE-202ENST00000415788 ADH6P28332 368 aa13.11□□□□□ -0.31
SGCE-202ENST00000415788 ERP29P30040 261 aaKnown RBP13.11□□□□□ -0.31
SGCE-202ENST00000415788 ACAA2P42765 397 aaKnown RBP13.11□□□□□ -0.31
SGCE-202ENST00000415788 GALK2Q01415 458 aa13.11□□□□□ -0.31
SGCE-202ENST00000415788 QPRTQ15274 297 aa13.11□□□□□ -0.31
SGCE-202ENST00000415788 PLPPR5Q32ZL2 321 aa13.11□□□□□ -0.31
SGCE-202ENST00000415788 CCDC58Q4VC31 144 aa13.11□□□□□ -0.31
SGCE-202ENST00000415788 MEDAGQ5VYS4 303 aa13.11□□□□□ -0.31
SGCE-202ENST00000415788 ARSKQ6UWY0 536 aa13.11□□□□□ -0.31
SGCE-202ENST00000415788 SIAH3Q8IW03 269 aa13.11□□□□□ -0.31
SGCE-202ENST00000415788 OR14L1PQ8NHC6 308 aa13.11□□□□□ -0.31
SGCE-202ENST00000415788 ZNF563Q8TA94 476 aa13.11□□□□□ -0.31
SGCE-202ENST00000415788 SNRNP40Q96DI7 357 aaKnown RBP13.11□□□□□ -0.31
SGCE-202ENST00000415788 MRGPRX4Q96LA9 322 aa13.11□□□□□ -0.31
SGCE-202ENST00000415788 RPRD1BQ9NQG5 326 aaKnown RBP13.11□□□□□ -0.31
SGCE-202ENST00000415788 ACOXLQ9NUZ1 547 aa13.11□□□□□ -0.31
SGCE-202ENST00000415788 CMAHPQ9Y471 501 aa13.11□□□□□ -0.31
SGCE-202ENST00000415788 LINC01387J3KSC0 135 aa13.1□□□□□ -0.31
SGCE-202ENST00000415788 AP3D1O14617 1153 aa13.1□□□□□ -0.31
SGCE-202ENST00000415788 RGS5O15539 181 aa13.1□□□□□ -0.31
SGCE-202ENST00000415788 FRS3O43559 492 aa13.1□□□□□ -0.31
SGCE-202ENST00000415788 ZIC3O60481 467 aa13.1□□□□□ -0.31
SGCE-202ENST00000415788 CDC40O60508 579 aaKnown RBP eCLIP13.1□□□□□ -0.31
SGCE-202ENST00000415788 ADAM11O75078 769 aa13.1□□□□□ -0.31
SGCE-202ENST00000415788 IGHG3P01860 377 aa13.1□□□□□ -0.31
SGCE-202ENST00000415788 ZNF17P17021 662 aa13.1□□□□□ -0.31
SGCE-202ENST00000415788 HLA-DMAP28067 261 aa13.1□□□□□ -0.31
SGCE-202ENST00000415788 ZNF136P52737 540 aa13.1□□□□□ -0.31
SGCE-202ENST00000415788 DLX5P56178 289 aa13.1□□□□□ -0.31
SGCE-202ENST00000415788 SPIBQ01892 262 aa13.1□□□□□ -0.31
SGCE-202ENST00000415788 SSX1Q16384 188 aa13.1□□□□□ -0.31
SGCE-202ENST00000415788 KRTCAP3Q53RY4 240 aa13.1□□□□□ -0.31
SGCE-202ENST00000415788 SLC25A53Q5H9E4 307 aa13.1□□□□□ -0.31
SGCE-202ENST00000415788 ZNF324BQ6AW86 544 aaPredicted RBP13.1□□□□□ -0.31
SGCE-202ENST00000415788 TCTE3Q8IZS6 198 aa13.1□□□□□ -0.31
SGCE-202ENST00000415788 LSMEM1Q8N8F7 131 aa13.1□□□□□ -0.31
SGCE-202ENST00000415788 GDPD1Q8N9F7 314 aa13.1□□□□□ -0.31
SGCE-202ENST00000415788 OR6T1Q8NGN1 323 aa13.1□□□□□ -0.31
SGCE-202ENST00000415788 DMRTB1Q96MA1 342 aa13.1□□□□□ -0.31
SGCE-202ENST00000415788 OR5M11Q96RB7 305 aa13.1□□□□□ -0.31
SGCE-202ENST00000415788 ZNF559Q9BR84 538 aa13.1□□□□□ -0.31
SGCE-202ENST00000415788 PIGQQ9BRB3 760 aa13.1□□□□□ -0.31
SGCE-202ENST00000415788 TRIM2Q9C040 744 aa13.1□□□□□ -0.31
SGCE-202ENST00000415788 POLR2J2Q9GZM3 115 aaKnown RBP13.1□□□□□ -0.31
SGCE-202ENST00000415788 POLR2J3Q9H1A7 115 aaKnown RBP13.1□□□□□ -0.31
SGCE-202ENST00000415788 ACER3Q9NUN7 267 aa13.1□□□□□ -0.31
SGCE-202ENST00000415788 VDAC3Q9Y277 283 aa13.1□□□□□ -0.31
SGCE-202ENST00000415788 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.1□□□□□ -0.31
SGCE-202ENST00000415788 ZNF670-ZNF695F2Z2N8 137 aa13.1□□□□□ -0.31
SGCE-202ENST00000415788 M0R3H8 397 aa13.1□□□□□ -0.31
SGCE-202ENST00000415788 ARHGEF9O43307 516 aa13.1□□□□□ -0.31
SGCE-202ENST00000415788 HCN1O60741 890 aa13.1□□□□□ -0.31
SGCE-202ENST00000415788 IFNW1P05000 195 aa13.1□□□□□ -0.31
SGCE-202ENST00000415788 PRG2P13727 222 aa13.1□□□□□ -0.31
SGCE-202ENST00000415788 PSMA1P25786 263 aaKnown RBP13.1□□□□□ -0.31
SGCE-202ENST00000415788 HMGA2P52926 109 aa13.1□□□□□ -0.31
SGCE-202ENST00000415788 RNLSQ5VYX0 342 aa13.1□□□□□ -0.31
SGCE-202ENST00000415788 WBP2NLQ6ICG8 309 aa13.1□□□□□ -0.31
SGCE-202ENST00000415788 GRINAQ7Z429 371 aa13.1□□□□□ -0.31
SGCE-202ENST00000415788 TSEN54Q7Z6J9 526 aaKnown RBP13.1□□□□□ -0.31
SGCE-202ENST00000415788 GTPBP8Q8N3Z3 284 aaPredicted RBP13.1□□□□□ -0.31
SGCE-202ENST00000415788 VANGL1Q8TAA9 524 aaPredicted RBP13.1□□□□□ -0.31
SGCE-202ENST00000415788 OPALINQ96PE5 141 aa13.1□□□□□ -0.31
SGCE-202ENST00000415788 TMEM27Q9HBJ8 222 aa13.1□□□□□ -0.31
SGCE-202ENST00000415788 KLHL21Q9UJP4 597 aa13.1□□□□□ -0.31
SGCE-202ENST00000415788 STUB1Q9UNE7 303 aa13.1□□□□□ -0.31
SGCE-202ENST00000415788 ZZEF1O43149 2961 aa13.09□□□□□ -0.31
SGCE-202ENST00000415788 EPG5Q9HCE0 2579 aa13.09□□□□□ -0.31
SGCE-202ENST00000415788 NPIPA5E9PKD4 350 aa13.09□□□□□ -0.31
SGCE-202ENST00000415788 SUSD5O60279 629 aa13.09□□□□□ -0.31
SGCE-202ENST00000415788 GP1BBP13224 206 aa13.09□□□□□ -0.31
SGCE-202ENST00000415788 RPS19P39019 145 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms