RNA–Protein interactions for RNA: ENST00000414675.6

LRCH3-202, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRCH3, Length 2,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-202ENST00000414675 PCDHGB2Q9Y5G2 931 aa13.93□□□□□ -0.18
LRCH3-202ENST00000414675 TRAV36DV7A0A075B6V5 113 aa13.93□□□□□ -0.18
LRCH3-202ENST00000414675 TMED7-TICAM2A0A0A6YYA0 188 aa13.93□□□□□ -0.18
LRCH3-202ENST00000414675 SUSD5O60279 629 aa13.93□□□□□ -0.18
LRCH3-202ENST00000414675 TMCC2O75069 709 aa13.93□□□□□ -0.18
LRCH3-202ENST00000414675 CCNKO75909 580 aa13.93□□□□□ -0.18
LRCH3-202ENST00000414675 APEX1P27695 318 aaKnown RBP13.93□□□□□ -0.18
LRCH3-202ENST00000414675 RFX2P48378 723 aa13.93□□□□□ -0.18
LRCH3-202ENST00000414675 GDI2P50395 445 aaKnown RBP13.93□□□□□ -0.18
LRCH3-202ENST00000414675 EMP2P54851 167 aa13.93□□□□□ -0.18
LRCH3-202ENST00000414675 ACTA2P62736 377 aa13.93□□□□□ -0.18
LRCH3-202ENST00000414675 ACTG2P63267 376 aa13.93□□□□□ -0.18
LRCH3-202ENST00000414675 SCN1BQ07699 218 aa13.93□□□□□ -0.18
LRCH3-202ENST00000414675 P2RY14Q15391 338 aa13.93□□□□□ -0.18
LRCH3-202ENST00000414675 AGAP6Q5VW22 663 aa13.93□□□□□ -0.18
LRCH3-202ENST00000414675 NUP54Q7Z3B4 507 aa13.93□□□□□ -0.18
LRCH3-202ENST00000414675 CEP76Q8TAP6 659 aa13.93□□□□□ -0.18
LRCH3-202ENST00000414675 SLC25A36Q96CQ1 311 aa13.93□□□□□ -0.18
LRCH3-202ENST00000414675 AGAP4Q96P64 663 aa13.93□□□□□ -0.18
LRCH3-202ENST00000414675 NEDD4LQ96PU5 975 aa13.93□□□□□ -0.18
LRCH3-202ENST00000414675 SRA1Q9HD15 236 aaKnown RBP13.93□□□□□ -0.18
LRCH3-202ENST00000414675 GRHPRQ9UBQ7 328 aa13.93□□□□□ -0.18
LRCH3-202ENST00000414675 KLHDC2Q9Y2U9 406 aa13.93□□□□□ -0.18
LRCH3-202ENST00000414675 TMED7Q9Y3B3 224 aa13.93□□□□□ -0.18
LRCH3-202ENST00000414675 HRH3Q9Y5N1 445 aa13.93□□□□□ -0.18
LRCH3-202ENST00000414675 WDFY3Q8IZQ1 3526 aa13.93□□□□□ -0.18
LRCH3-202ENST00000414675 CACNA1CQ13936 2221 aa13.92□□□□□ -0.18
LRCH3-202ENST00000414675 A0A0G2JK05 382 aa13.92□□□□□ -0.18
LRCH3-202ENST00000414675 TRBV11-1A0A0K0K1C0 115 aa13.92□□□□□ -0.18
LRCH3-202ENST00000414675 NPIPB7O75200 414 aa13.92□□□□□ -0.18
LRCH3-202ENST00000414675 THBS2P35442 1172 aa13.92□□□□□ -0.18
LRCH3-202ENST00000414675 RPS11P62280 158 aaKnown RBP eCLIP13.92□□□□□ -0.18
LRCH3-202ENST00000414675 SIRPAP78324 504 aa13.92□□□□□ -0.18
LRCH3-202ENST00000414675 TRAM1Q15629 374 aa13.92□□□□□ -0.18
LRCH3-202ENST00000414675 COL28A1Q2UY09 1125 aa13.92□□□□□ -0.18
LRCH3-202ENST00000414675 IDNKQ5T6J7 187 aa13.92□□□□□ -0.18
LRCH3-202ENST00000414675 RSBN1Q5VWQ0 802 aaPredicted RBP13.92□□□□□ -0.18
LRCH3-202ENST00000414675 PEAR1Q5VY43 1037 aaPredicted RBP13.92□□□□□ -0.18
LRCH3-202ENST00000414675 IL20RBQ6UXL0 311 aa13.92□□□□□ -0.18
LRCH3-202ENST00000414675 PPP1R3BQ86XI6 285 aa13.92□□□□□ -0.18
LRCH3-202ENST00000414675 NAT6Q93015 286 aa13.92□□□□□ -0.18
LRCH3-202ENST00000414675 RNF166Q96A37 237 aaPredicted RBP13.92□□□□□ -0.18
LRCH3-202ENST00000414675 SMIM19Q96E16 107 aa13.92□□□□□ -0.18
LRCH3-202ENST00000414675 OR11A1Q9GZK7 315 aa13.92□□□□□ -0.18
LRCH3-202ENST00000414675 PPP1R3EQ9H7J1 279 aa13.92□□□□□ -0.18
LRCH3-202ENST00000414675 TAS2R10Q9NYW0 307 aa13.92□□□□□ -0.18
LRCH3-202ENST00000414675 POU2F3Q9UKI9 436 aa13.92□□□□□ -0.18
LRCH3-202ENST00000414675 PPIEQ9UNP9 301 aaKnown RBP13.92□□□□□ -0.18
LRCH3-202ENST00000414675 PCDHGB7Q9Y5F8 929 aa13.92□□□□□ -0.18
LRCH3-202ENST00000414675 WDFY4Q6ZS81 3184 aa13.92□□□□□ -0.18
LRCH3-202ENST00000414675 KIF26BQ2KJY2 2108 aa13.92□□□□□ -0.18
LRCH3-202ENST00000414675 A0A1W2PPK0 400 aa13.92□□□□□ -0.18
LRCH3-202ENST00000414675 C11orf98E9PRG8 122 aa13.92□□□□□ -0.18
LRCH3-202ENST00000414675 HIST1H2ABP04908 130 aa13.92□□□□□ -0.18
LRCH3-202ENST00000414675 EVX1P49640 407 aa13.92□□□□□ -0.18
LRCH3-202ENST00000414675 POLR2HP52434 150 aaKnown RBP13.92□□□□□ -0.18
LRCH3-202ENST00000414675 GBX2P52951 348 aaPredicted RBP13.92□□□□□ -0.18
LRCH3-202ENST00000414675 PYDC2Q56P42 97 aa13.92□□□□□ -0.18
LRCH3-202ENST00000414675 ZNF544Q6NX49 715 aa13.92□□□□□ -0.18
LRCH3-202ENST00000414675 ZNF517Q6ZMY9 492 aaPredicted RBP13.92□□□□□ -0.18
LRCH3-202ENST00000414675 HIST3H2AQ7L7L0 130 aa13.92□□□□□ -0.18
LRCH3-202ENST00000414675 OR6V1Q8N148 313 aa13.92□□□□□ -0.18
LRCH3-202ENST00000414675 CHAC2Q8WUX2 184 aa13.92□□□□□ -0.18
LRCH3-202ENST00000414675 METTL21AQ8WXB1 218 aa13.92□□□□□ -0.18
LRCH3-202ENST00000414675 HIST1H2ACQ93077 130 aa13.92□□□□□ -0.18
LRCH3-202ENST00000414675 SMAD5Q99717 465 aaKnown RBP13.92□□□□□ -0.18
LRCH3-202ENST00000414675 GALNT9Q9HCQ5 603 aa13.92□□□□□ -0.18
LRCH3-202ENST00000414675 A0A087WV48 116 aa13.91□□□□□ -0.18
LRCH3-202ENST00000414675 TVP23AA6NH52 213 aa13.91□□□□□ -0.18
LRCH3-202ENST00000414675 GPANK1O95872 356 aa13.91□□□□□ -0.18
LRCH3-202ENST00000414675 ONECUT2O95948 504 aa13.91□□□□□ -0.18
LRCH3-202ENST00000414675 KRT8P05787 483 aa13.91□□□□□ -0.18
LRCH3-202ENST00000414675 CAPZA2P47755 286 aa13.91□□□□□ -0.18
LRCH3-202ENST00000414675 ZNF684Q5T5D7 378 aa13.91□□□□□ -0.18
LRCH3-202ENST00000414675 BICRALQ6AI39 1079 aa13.91□□□□□ -0.18
LRCH3-202ENST00000414675 HBMQ6B0K9 141 aa13.91□□□□□ -0.18
LRCH3-202ENST00000414675 SYT9Q86SS6 491 aa13.91□□□□□ -0.18
LRCH3-202ENST00000414675 RAB43Q86YS6 212 aa13.91□□□□□ -0.18
LRCH3-202ENST00000414675 GDPD1Q8N9F7 314 aa13.91□□□□□ -0.18
LRCH3-202ENST00000414675 SCAIQ8N9R8 606 aa13.91□□□□□ -0.18
LRCH3-202ENST00000414675 THAP4Q8WY91 577 aa13.91□□□□□ -0.18
LRCH3-202ENST00000414675 HGDQ93099 445 aa13.91□□□□□ -0.18
LRCH3-202ENST00000414675 PDCD1LG2Q9BQ51 273 aa13.91□□□□□ -0.18
LRCH3-202ENST00000414675 RXFP3Q9NSD7 469 aa13.91□□□□□ -0.18
LRCH3-202ENST00000414675 SLC25A12O75746 678 aa13.9□□□□□ -0.18
LRCH3-202ENST00000414675 PLGP00747 810 aaPredicted RBP13.9□□□□□ -0.18
LRCH3-202ENST00000414675 ZNF28P17035 718 aa13.9□□□□□ -0.18
LRCH3-202ENST00000414675 SLC25A35Q3KQZ1 300 aa13.9□□□□□ -0.18
LRCH3-202ENST00000414675 GRINAQ7Z429 371 aa13.9□□□□□ -0.18
LRCH3-202ENST00000414675 CPEB2Q7Z5Q1 589 aaKnown RBP13.9□□□□□ -0.18
LRCH3-202ENST00000414675 TIGD4Q8IY51 512 aa13.9□□□□□ -0.18
LRCH3-202ENST00000414675 MS4A15Q8N5U1 240 aa13.9□□□□□ -0.18
LRCH3-202ENST00000414675 NUBPLQ8TB37 319 aa13.9□□□□□ -0.18
LRCH3-202ENST00000414675 NECAB3Q96P71 396 aaPredicted RBP13.9□□□□□ -0.18
LRCH3-202ENST00000414675 CRB3Q9BUF7 120 aa13.9□□□□□ -0.18
LRCH3-202ENST00000414675 SYT4Q9H2B2 425 aa13.9□□□□□ -0.18
LRCH3-202ENST00000414675 NPAP1Q9NZP6 1156 aa13.9□□□□□ -0.18
LRCH3-202ENST00000414675 ITGB1BP2Q9UKP3 347 aa13.9□□□□□ -0.18
LRCH3-202ENST00000414675 TRBV2A0A0J9YWF9 115 aa13.9□□□□□ -0.18
LRCH3-202ENST00000414675 ELK1P19419 428 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms