RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 MMP15P51511 669 aa4.99□□□□□ -1.61
CLK1-202ENST00000409403 CDH12P55289 794 aa4.99□□□□□ -1.61
CLK1-202ENST00000409403 FAM3BP58499 235 aaPredicted RBP4.99□□□□□ -1.61
CLK1-202ENST00000409403 SMIM11AP58511 58 aa4.99□□□□□ -1.61
CLK1-202ENST00000409403 ACTR1AP61163 376 aa4.99□□□□□ -1.61
CLK1-202ENST00000409403 RPL15P61313 204 aaKnown RBP4.99□□□□□ -1.61
CLK1-202ENST00000409403 KCNJ10P78508 379 aa4.99□□□□□ -1.61
CLK1-202ENST00000409403 TNFRSF17Q02223 184 aa4.99□□□□□ -1.61
CLK1-202ENST00000409403 ACSM1Q08AH1 577 aa4.99□□□□□ -1.61
CLK1-202ENST00000409403 RBBP4Q09028 425 aa4.99□□□□□ -1.61
CLK1-202ENST00000409403 PDZK1IP1Q13113 114 aa4.99□□□□□ -1.61
CLK1-202ENST00000409403 ILKQ13418 452 aa4.99□□□□□ -1.61
CLK1-202ENST00000409403 TRAM1Q15629 374 aa4.99□□□□□ -1.61
CLK1-202ENST00000409403 NDUFA9Q16795 377 aa4.99□□□□□ -1.61
CLK1-202ENST00000409403 ZNF789Q5FWF6 425 aa4.99□□□□□ -1.61
CLK1-202ENST00000409403 C12orf73Q69YU5 71 aa4.99□□□□□ -1.61
CLK1-202ENST00000409403 IGFL4Q6B9Z1 124 aa4.99□□□□□ -1.61
CLK1-202ENST00000409403 SUSD1Q6UWL2 747 aa4.99□□□□□ -1.61
CLK1-202ENST00000409403 KIRREL2Q6UWL6 708 aa4.99□□□□□ -1.61
CLK1-202ENST00000409403 UNC5DQ6UXZ4 953 aa4.99□□□□□ -1.61
CLK1-202ENST00000409403 LINGO4Q6UY18 593 aa4.99□□□□□ -1.61
CLK1-202ENST00000409403 ARMCX2Q7L311 632 aa4.99□□□□□ -1.61
CLK1-202ENST00000409403 VTCN1Q7Z7D3 282 aa4.99□□□□□ -1.61
CLK1-202ENST00000409403 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.99□□□□□ -1.61
CLK1-202ENST00000409403 OAFQ86UD1 273 aa4.99□□□□□ -1.61
CLK1-202ENST00000409403 PIM3Q86V86 326 aa4.99□□□□□ -1.61
CLK1-202ENST00000409403 SERINC5Q86VE9 423 aa4.99□□□□□ -1.61
CLK1-202ENST00000409403 TPRA1Q86W33 373 aa4.99□□□□□ -1.61
CLK1-202ENST00000409403 LAS2Q8IYD9 372 aa4.99□□□□□ -1.61
CLK1-202ENST00000409403 GPR65Q8IYL9 337 aa4.99□□□□□ -1.61
CLK1-202ENST00000409403 CPXM2Q8N436 756 aa4.99□□□□□ -1.61
CLK1-202ENST00000409403 C12orf76Q8N812 135 aaPredicted RBP4.99□□□□□ -1.61
CLK1-202ENST00000409403 OR5J2Q8NH18 312 aa4.99□□□□□ -1.61
CLK1-202ENST00000409403 SPATA22Q8NHS9 363 aa4.99□□□□□ -1.61
CLK1-202ENST00000409403 SPPL2AQ8TCT8 520 aa4.99□□□□□ -1.61
CLK1-202ENST00000409403 SLC2A12Q8TD20 617 aa4.99□□□□□ -1.61
CLK1-202ENST00000409403 GNPDA2Q8TDQ7 276 aa4.99□□□□□ -1.61
CLK1-202ENST00000409403 CNOT9Q92600 299 aaKnown RBP4.99□□□□□ -1.61
CLK1-202ENST00000409403 TPD52L3Q96J77 140 aa4.99□□□□□ -1.61
CLK1-202ENST00000409403 ZNF354BQ96LW1 612 aa4.99□□□□□ -1.61
CLK1-202ENST00000409403 TRIB3Q96RU7 358 aa4.99□□□□□ -1.61
CLK1-202ENST00000409403 SLC25A51Q9H1U9 297 aa4.99□□□□□ -1.61
CLK1-202ENST00000409403 WDR26Q9H7D7 661 aa4.99□□□□□ -1.61
CLK1-202ENST00000409403 FGF20Q9NP95 211 aaPredicted RBP4.99□□□□□ -1.61
CLK1-202ENST00000409403 TEX10Q9NXF1 929 aaPredicted RBP4.99□□□□□ -1.61
CLK1-202ENST00000409403 RASL12Q9NYN1 266 aa4.99□□□□□ -1.61
CLK1-202ENST00000409403 GDE1Q9NZC3 331 aa4.99□□□□□ -1.61
CLK1-202ENST00000409403 FOXJ2Q9P0K8 574 aa4.99□□□□□ -1.61
CLK1-202ENST00000409403 FBXW11Q9UKB1 542 aa4.99□□□□□ -1.61
CLK1-202ENST00000409403 RPH3AQ9Y2J0 694 aaPredicted RBP4.99□□□□□ -1.61
CLK1-202ENST00000409403 UTP20O75691 2785 aaKnown RBP4.98□□□□□ -1.61
CLK1-202ENST00000409403 NF1P21359 2839 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 TBC1D3DA0A087WVF3 549 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 TBC1D3IA0A087WXS9 549 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 TBC1D3EA0A087X179 549 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 TBC1D3KA0A087X1G2 549 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 OR2M5A3KFT3 312 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 TBC1D3BA6NDS4 549 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 TBC1D3FA6NER0 549 aaPredicted RBP4.98□□□□□ -1.61
CLK1-202ENST00000409403 SLC9B1P1A6NJY1 282 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 TBC1D3LB9A6J9 549 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 G3V3Q6 166 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 I6L893 689 aaPredicted RBP4.98□□□□□ -1.61
CLK1-202ENST00000409403 CACNB4O00305 520 aaPredicted RBP4.98□□□□□ -1.61
CLK1-202ENST00000409403 KHDRBS3O75525 346 aaKnown RBP4.98□□□□□ -1.61
CLK1-202ENST00000409403 TOXO94900 526 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 CRYABP02511 175 aaKnown RBP4.98□□□□□ -1.61
CLK1-202ENST00000409403 VTNP04004 478 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 CRYBA1P05813 215 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 GP1BAP07359 652 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 HOXC4P09017 264 aaPredicted RBP4.98□□□□□ -1.61
CLK1-202ENST00000409403 ELFN1P0C7U0 828 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 TBC1D3HP0C7X1 549 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 CBSLP0DN79 551 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 ELK1P19419 428 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 PRPS1L1P21108 318 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 HOXC13P31276 330 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 GALNSP34059 522 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 CBSP35520 551 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 CDKN2CP42773 168 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 CSNK1EP49674 416 aaKnown RBP4.98□□□□□ -1.61
CLK1-202ENST00000409403 RBP2P50120 134 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 XKP51811 444 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 STC1P52823 247 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 HMGA2P52926 109 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 ARFIP1P53367 373 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 HCCSP53701 268 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 CTBP2P56545 445 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 ERVPABLB-1P60509 514 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 ZP1P60852 638 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 RPS25P62851 125 aaKnown RBP4.98□□□□□ -1.61
CLK1-202ENST00000409403 SELENOWP63302 87 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 BDH1Q02338 343 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 CFHR1Q03591 330 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 TLE3Q04726 772 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 SNTB2Q13425 540 aaKnown RBP4.98□□□□□ -1.61
CLK1-202ENST00000409403 GTF2H2Q13888 395 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 EXOC3L2Q2M3D2 409 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 CTXN3Q4LDR2 81 aa4.98□□□□□ -1.61
CLK1-202ENST00000409403 RFTN2Q52LD8 501 aaPredicted RBP4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms