RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 BGLAPP02818 100 aa8.16□□□□□ -1.1
HMGN1-202ENST00000380747 IFNW1P05000 195 aa8.16□□□□□ -1.1
HMGN1-202ENST00000380747 NQO1P15559 274 aaKnown RBP8.16□□□□□ -1.1
HMGN1-202ENST00000380747 IFNA8P32881 189 aa8.16□□□□□ -1.1
HMGN1-202ENST00000380747 NTF4P34130 210 aa8.16□□□□□ -1.1
HMGN1-202ENST00000380747 P2RY4P51582 365 aa8.16□□□□□ -1.1
HMGN1-202ENST00000380747 LTBQ06643 244 aa8.16□□□□□ -1.1
HMGN1-202ENST00000380747 PMS2P3Q13401 168 aa8.16□□□□□ -1.1
HMGN1-202ENST00000380747 PIN1Q13526 163 aaPredicted RBP8.16□□□□□ -1.1
HMGN1-202ENST00000380747 C1DQ13901 141 aaKnown RBP8.16□□□□□ -1.1
HMGN1-202ENST00000380747 MFSD13AQ14CX5 517 aa8.16□□□□□ -1.1
HMGN1-202ENST00000380747 DAZAP2Q15038 168 aaPredicted RBP8.16□□□□□ -1.1
HMGN1-202ENST00000380747 SFRP5Q5T4F7 317 aa8.16□□□□□ -1.1
HMGN1-202ENST00000380747 FBXW9Q5XUX1 488 aa8.16□□□□□ -1.1
HMGN1-202ENST00000380747 LINC00114Q6XXX2 140 aa8.16□□□□□ -1.1
HMGN1-202ENST00000380747 Q6ZT83 130 aa8.16□□□□□ -1.1
HMGN1-202ENST00000380747 CBLL1Q75N03 491 aa8.16□□□□□ -1.1
HMGN1-202ENST00000380747 BHLHA15Q7RTS1 189 aaPredicted RBP8.16□□□□□ -1.1
HMGN1-202ENST00000380747 WFDC8Q8IUA0 241 aa8.16□□□□□ -1.1
HMGN1-202ENST00000380747 TGIF2LYQ8IUE0 185 aa8.16□□□□□ -1.1
HMGN1-202ENST00000380747 GABRG1Q8N1C3 465 aa8.16□□□□□ -1.1
HMGN1-202ENST00000380747 STEAP2Q8NFT2 490 aa8.16□□□□□ -1.1
HMGN1-202ENST00000380747 OR6S1Q8NH40 331 aa8.16□□□□□ -1.1
HMGN1-202ENST00000380747 ZNF417Q8TAU3 575 aa8.16□□□□□ -1.1
HMGN1-202ENST00000380747 GEMIN6Q8WXD5 167 aaKnown RBP8.16□□□□□ -1.1
HMGN1-202ENST00000380747 NINJ1Q92982 152 aa8.16□□□□□ -1.1
HMGN1-202ENST00000380747 KISS1RQ969F8 398 aaPredicted RBP8.16□□□□□ -1.1
HMGN1-202ENST00000380747 S100PBPQ96BU1 408 aa8.16□□□□□ -1.1
HMGN1-202ENST00000380747 MOGAT1Q96PD6 335 aa8.16□□□□□ -1.1
HMGN1-202ENST00000380747 ZNF385AQ96PM9 386 aaKnown RBP8.16□□□□□ -1.1
HMGN1-202ENST00000380747 ZNF587Q96SQ5 575 aaPredicted RBP8.16□□□□□ -1.1
HMGN1-202ENST00000380747 PRSS27Q9BQR3 290 aa8.16□□□□□ -1.1
HMGN1-202ENST00000380747 ASPNQ9BXN1 380 aa8.16□□□□□ -1.1
HMGN1-202ENST00000380747 HDHD5Q9BXW7 423 aa8.16□□□□□ -1.1
HMGN1-202ENST00000380747 POLDIP3Q9BY77 421 aaKnown RBP8.16□□□□□ -1.1
HMGN1-202ENST00000380747 CLEC4MQ9H2X3 399 aaPredicted RBP8.16□□□□□ -1.1
HMGN1-202ENST00000380747 PARPBPQ9NWS1 579 aa8.16□□□□□ -1.1
HMGN1-202ENST00000380747 ZNF226Q9NYT6 803 aa8.16□□□□□ -1.1
HMGN1-202ENST00000380747 FRRS1LQ9P0K9 344 aa8.16□□□□□ -1.1
HMGN1-202ENST00000380747 UPB1Q9UBR1 384 aa8.16□□□□□ -1.1
HMGN1-202ENST00000380747 RIMS3Q9UJD0 308 aa8.16□□□□□ -1.1
HMGN1-202ENST00000380747 RPS6KA6Q9UK32 745 aa8.16□□□□□ -1.1
HMGN1-202ENST00000380747 CORINQ9Y5Q5 1042 aa8.16□□□□□ -1.1
HMGN1-202ENST00000380747 HRNRQ86YZ3 2850 aaPredicted RBP8.16□□□□□ -1.1
HMGN1-202ENST00000380747 COL6A5A8TX70 2615 aa8.16□□□□□ -1.1
HMGN1-202ENST00000380747 INTS1Q8N201 2190 aaKnown RBP8.15□□□□□ -1.1
HMGN1-202ENST00000380747 RGS9O75916 674 aaPredicted RBP8.15□□□□□ -1.1
HMGN1-202ENST00000380747 LYZL6O75951 148 aa8.15□□□□□ -1.1
HMGN1-202ENST00000380747 KRT33AO76009 404 aa8.15□□□□□ -1.1
HMGN1-202ENST00000380747 OR6A2O95222 327 aa8.15□□□□□ -1.1
HMGN1-202ENST00000380747 CH25HO95992 272 aa8.15□□□□□ -1.1
HMGN1-202ENST00000380747 UMPSP11172 480 aa8.15□□□□□ -1.1
HMGN1-202ENST00000380747 FOSL1P15407 271 aa8.15□□□□□ -1.1
HMGN1-202ENST00000380747 PPP3CBP16298 524 aa8.15□□□□□ -1.1
HMGN1-202ENST00000380747 ZNF43P17038 809 aa8.15□□□□□ -1.1
HMGN1-202ENST00000380747 PSMB1P20618 241 aaKnown RBP8.15□□□□□ -1.1
HMGN1-202ENST00000380747 CALB2P22676 271 aa8.15□□□□□ -1.1
HMGN1-202ENST00000380747 IGHV1-2P23083 117 aa8.15□□□□□ -1.1
HMGN1-202ENST00000380747 DNAJA1P31689 397 aaKnown RBP8.15□□□□□ -1.1
HMGN1-202ENST00000380747 MSX2P35548 267 aaPredicted RBP8.15□□□□□ -1.1
HMGN1-202ENST00000380747 CLDN17P56750 224 aa8.15□□□□□ -1.1
HMGN1-202ENST00000380747 FAPQ12884 760 aa8.15□□□□□ -1.1
HMGN1-202ENST00000380747 ITGADQ13349 1161 aa8.15□□□□□ -1.1
HMGN1-202ENST00000380747 P2RY6Q15077 328 aa8.15□□□□□ -1.1
HMGN1-202ENST00000380747 STK11Q15831 433 aa8.15□□□□□ -1.1
HMGN1-202ENST00000380747 C9orf135Q5VTT2 229 aa8.15□□□□□ -1.1
HMGN1-202ENST00000380747 NIPAL3Q6P499 406 aa8.15□□□□□ -1.1
HMGN1-202ENST00000380747 RINLQ6ZS11 566 aa8.15□□□□□ -1.1
HMGN1-202ENST00000380747 CREB3L2Q70SY1 520 aa8.15□□□□□ -1.1
HMGN1-202ENST00000380747 H1FNTQ75WM6 255 aaPredicted RBP8.15□□□□□ -1.1
HMGN1-202ENST00000380747 EPHX4Q8IUS5 362 aa8.15□□□□□ -1.1
HMGN1-202ENST00000380747 NKAIN4Q8IVV8 208 aa8.15□□□□□ -1.1
HMGN1-202ENST00000380747 ZIC4Q8N9L1 334 aa8.15□□□□□ -1.1
HMGN1-202ENST00000380747 RBM15BQ8NDT2 890 aaKnown RBP8.15□□□□□ -1.1
HMGN1-202ENST00000380747 TMEM255BQ8WV15 326 aa8.15□□□□□ -1.1
HMGN1-202ENST00000380747 TMEM45BQ96B21 275 aa8.15□□□□□ -1.1
HMGN1-202ENST00000380747 PIK3IP1Q96FE7 263 aa8.15□□□□□ -1.1
HMGN1-202ENST00000380747 PRRC1Q96M27 445 aa8.15□□□□□ -1.1
HMGN1-202ENST00000380747 OXGR1Q96P68 337 aa8.15□□□□□ -1.1
HMGN1-202ENST00000380747 FNDC11Q9BVV2 318 aa8.15□□□□□ -1.1
HMGN1-202ENST00000380747 AMBRA1Q9C0C7 1298 aa8.15□□□□□ -1.1
HMGN1-202ENST00000380747 POLR2J2Q9GZM3 115 aaKnown RBP8.15□□□□□ -1.1
HMGN1-202ENST00000380747 POLR2J3Q9H1A7 115 aaKnown RBP8.15□□□□□ -1.1
HMGN1-202ENST00000380747 RASSF1Q9NS23 344 aa8.15□□□□□ -1.1
HMGN1-202ENST00000380747 SLC7A10Q9NS82 523 aa8.15□□□□□ -1.1
HMGN1-202ENST00000380747 ASB6Q9NWX5 421 aa8.15□□□□□ -1.1
HMGN1-202ENST00000380747 RHCGQ9UBD6 479 aa8.15□□□□□ -1.1
HMGN1-202ENST00000380747 MAGEL2Q9UJ55 1249 aa8.15□□□□□ -1.1
HMGN1-202ENST00000380747 SAMD4AQ9UPU9 718 aaKnown RBP8.15□□□□□ -1.1
HMGN1-202ENST00000380747 B3GALT5Q9Y2C3 310 aa8.15□□□□□ -1.1
HMGN1-202ENST00000380747 SNX13Q9Y5W8 968 aa8.15□□□□□ -1.1
HMGN1-202ENST00000380747 V9GYQ6 96 aa8.15□□□□□ -1.1
HMGN1-202ENST00000380747 ATRQ13535 2644 aa8.14□□□□□ -1.11
HMGN1-202ENST00000380747 CIB4A0PJX0 185 aa8.14□□□□□ -1.11
HMGN1-202ENST00000380747 C11orf98E9PRG8 122 aa8.14□□□□□ -1.11
HMGN1-202ENST00000380747 J3KTA2 159 aa8.14□□□□□ -1.11
HMGN1-202ENST00000380747 FBXO24O75426 580 aa8.14□□□□□ -1.11
HMGN1-202ENST00000380747 RAD51DO75771 328 aa8.14□□□□□ -1.11
HMGN1-202ENST00000380747 SERPINI2O75830 405 aa8.14□□□□□ -1.11
HMGN1-202ENST00000380747 CNOT4O95628 575 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms