RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 SHISA8B8ZZ34 492 aa17.93■□□□□ 0.46
PDLIM5-205ENST00000380180 E9PI62 339 aa17.93■□□□□ 0.46
PDLIM5-205ENST00000380180 H7C1C5 153 aa17.93■□□□□ 0.46
PDLIM5-205ENST00000380180 MT-CO3P00414 261 aa17.93■□□□□ 0.46
PDLIM5-205ENST00000380180 ZNF41P51814 821 aaPredicted RBP17.93■□□□□ 0.46
PDLIM5-205ENST00000380180 LCN6P62502 163 aa17.93■□□□□ 0.46
PDLIM5-205ENST00000380180 MXD1Q05195 221 aa17.93■□□□□ 0.46
PDLIM5-205ENST00000380180 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.93■□□□□ 0.46
PDLIM5-205ENST00000380180 OPN5Q6U736 354 aa17.93■□□□□ 0.46
PDLIM5-205ENST00000380180 PPP1R32Q7Z5V6 425 aa17.93■□□□□ 0.46
PDLIM5-205ENST00000380180 GPALPP1Q8IXQ4 340 aa17.93■□□□□ 0.46
PDLIM5-205ENST00000380180 SLC35F2Q8IXU6 374 aa17.93■□□□□ 0.46
PDLIM5-205ENST00000380180 ARIH2OSQ8N7S6 290 aa17.93■□□□□ 0.46
PDLIM5-205ENST00000380180 SUMF1Q8NBK3 374 aa17.93■□□□□ 0.46
PDLIM5-205ENST00000380180 DCLRE1CQ96SD1 692 aaKnown RBP17.93■□□□□ 0.46
PDLIM5-205ENST00000380180 KCNS3Q9BQ31 491 aa17.93■□□□□ 0.46
PDLIM5-205ENST00000380180 TTTY10Q9BZA0 68 aa17.93■□□□□ 0.46
PDLIM5-205ENST00000380180 PALMDQ9NP74 551 aa17.93■□□□□ 0.46
PDLIM5-205ENST00000380180 INIPQ9NRY2 104 aa17.93■□□□□ 0.46
PDLIM5-205ENST00000380180 GSTK1Q9Y2Q3 226 aa17.93■□□□□ 0.46
PDLIM5-205ENST00000380180 FREM3P0C091 2139 aa17.92■□□□□ 0.46
PDLIM5-205ENST00000380180 FTCDNL1E5RQL4 147 aa17.92■□□□□ 0.46
PDLIM5-205ENST00000380180 ETV2O00321 342 aaPredicted RBP17.92■□□□□ 0.46
PDLIM5-205ENST00000380180 DCTN6O00399 190 aa17.92■□□□□ 0.46
PDLIM5-205ENST00000380180 PLPP3O14495 311 aa17.92■□□□□ 0.46
PDLIM5-205ENST00000380180 PLGP00747 810 aaPredicted RBP17.92■□□□□ 0.46
PDLIM5-205ENST00000380180 HLA-DPB1P04440 258 aa17.92■□□□□ 0.46
PDLIM5-205ENST00000380180 OTX2P32243 289 aa17.92■□□□□ 0.46
PDLIM5-205ENST00000380180 RORCP51449 518 aa17.92■□□□□ 0.46
PDLIM5-205ENST00000380180 TBC1D25Q3MII6 688 aa17.92■□□□□ 0.46
PDLIM5-205ENST00000380180 PRAMEF20Q5VT98 475 aa17.92■□□□□ 0.46
PDLIM5-205ENST00000380180 VASH1Q7L8A9 365 aaPredicted RBP17.92■□□□□ 0.46
PDLIM5-205ENST00000380180 ZNF417Q8TAU3 575 aa17.92■□□□□ 0.46
PDLIM5-205ENST00000380180 ZNF587Q96SQ5 575 aaPredicted RBP17.92■□□□□ 0.46
PDLIM5-205ENST00000380180 CPNE5Q9HCH3 593 aa17.92■□□□□ 0.46
PDLIM5-205ENST00000380180 WDR70Q9NW82 654 aa17.92■□□□□ 0.46
PDLIM5-205ENST00000380180 FARSAQ9Y285 508 aaKnown RBP17.92■□□□□ 0.46
PDLIM5-205ENST00000380180 MAGEB4O15481 346 aaPredicted RBP17.91■□□□□ 0.46
PDLIM5-205ENST00000380180 EFNA2O43921 213 aa17.91■□□□□ 0.46
PDLIM5-205ENST00000380180 OR6A2O95222 327 aa17.91■□□□□ 0.46
PDLIM5-205ENST00000380180 IL1AP01583 271 aa17.91■□□□□ 0.46
PDLIM5-205ENST00000380180 IL11P20809 199 aa17.91■□□□□ 0.46
PDLIM5-205ENST00000380180 PLPPR5Q32ZL2 321 aa17.91■□□□□ 0.46
PDLIM5-205ENST00000380180 DHRS13Q6UX07 377 aa17.91■□□□□ 0.46
PDLIM5-205ENST00000380180 RPS19BP1Q86WX3 136 aaKnown RBP17.91■□□□□ 0.46
PDLIM5-205ENST00000380180 WDSUB1Q8N9V3 476 aa17.91■□□□□ 0.46
PDLIM5-205ENST00000380180 SYT14Q8NB59 555 aa17.91■□□□□ 0.46
PDLIM5-205ENST00000380180 OR2M3Q8NG83 312 aa17.91■□□□□ 0.46
PDLIM5-205ENST00000380180 ASB15Q8WXK1 588 aa17.91■□□□□ 0.46
PDLIM5-205ENST00000380180 GALNT8Q9NY28 637 aa17.91■□□□□ 0.46
PDLIM5-205ENST00000380180 FBXL2Q9UKC9 423 aa17.91■□□□□ 0.46
PDLIM5-205ENST00000380180 MED12Q93074 2177 aa17.91■□□□□ 0.46
PDLIM5-205ENST00000380180 AHCTF1Q8WYP5 2266 aa17.91■□□□□ 0.46
PDLIM5-205ENST00000380180 GABRPO00591 440 aa17.91■□□□□ 0.46
PDLIM5-205ENST00000380180 ARHGEF9O43307 516 aa17.91■□□□□ 0.46
PDLIM5-205ENST00000380180 ZNF208O43345 1280 aa17.91■□□□□ 0.46
PDLIM5-205ENST00000380180 RAB40ALP0C0E4 278 aa17.91■□□□□ 0.46
PDLIM5-205ENST00000380180 CLEC2LP0C7M8 214 aa17.91■□□□□ 0.46
PDLIM5-205ENST00000380180 S100A5P33763 92 aa17.91■□□□□ 0.46
PDLIM5-205ENST00000380180 SDC2P34741 201 aa17.91■□□□□ 0.46
PDLIM5-205ENST00000380180 SNTA1Q13424 505 aa17.91■□□□□ 0.46
PDLIM5-205ENST00000380180 INSL4Q14641 139 aa17.91■□□□□ 0.46
PDLIM5-205ENST00000380180 SSPNQ14714 243 aa17.91■□□□□ 0.46
PDLIM5-205ENST00000380180 SLC25A53Q5H9E4 307 aa17.91■□□□□ 0.46
PDLIM5-205ENST00000380180 OR6V1Q8N148 313 aa17.91■□□□□ 0.46
PDLIM5-205ENST00000380180 ZNF511Q8NB15 262 aa17.91■□□□□ 0.46
PDLIM5-205ENST00000380180 OR6S1Q8NH40 331 aa17.91■□□□□ 0.46
PDLIM5-205ENST00000380180 DDIT4LQ96D03 193 aa17.91■□□□□ 0.46
PDLIM5-205ENST00000380180 DTNBP1Q96EV8 351 aa17.91■□□□□ 0.46
PDLIM5-205ENST00000380180 MRGPRX4Q96LA9 322 aa17.91■□□□□ 0.46
PDLIM5-205ENST00000380180 QPCTLQ9NXS2 382 aa17.91■□□□□ 0.46
PDLIM5-205ENST00000380180 MRPL39Q9NYK5 338 aaKnown RBP17.91■□□□□ 0.46
PDLIM5-205ENST00000380180 FOXJ2Q9P0K8 574 aa17.91■□□□□ 0.46
PDLIM5-205ENST00000380180 COPS3Q9UNS2 423 aa17.91■□□□□ 0.46
PDLIM5-205ENST00000380180 MOKQ9UQ07 419 aa17.91■□□□□ 0.46
PDLIM5-205ENST00000380180 RENP00797 406 aa17.9■□□□□ 0.46
PDLIM5-205ENST00000380180 TGM4P49221 684 aa17.9■□□□□ 0.46
PDLIM5-205ENST00000380180 SSR4P51571 173 aa17.9■□□□□ 0.46
PDLIM5-205ENST00000380180 RPL27P61353 136 aaKnown RBP17.9■□□□□ 0.46
PDLIM5-205ENST00000380180 ACKR1Q16570 336 aa17.9■□□□□ 0.46
PDLIM5-205ENST00000380180 TP53I3Q53FA7 332 aa17.9■□□□□ 0.46
PDLIM5-205ENST00000380180 MFSD8Q8NHS3 518 aa17.9■□□□□ 0.46
PDLIM5-205ENST00000380180 POC1BQ8TC44 478 aa17.9■□□□□ 0.46
PDLIM5-205ENST00000380180 SLC25A46Q96AG3 418 aa17.9■□□□□ 0.46
PDLIM5-205ENST00000380180 COQ7Q99807 217 aa17.9■□□□□ 0.46
PDLIM5-205ENST00000380180 SYT4Q9H2B2 425 aa17.9■□□□□ 0.46
PDLIM5-205ENST00000380180 PEX16Q9Y5Y5 336 aa17.9■□□□□ 0.46
PDLIM5-205ENST00000380180 A0A075B6Q4 140 aa17.89■□□□□ 0.46
PDLIM5-205ENST00000380180 CCDC187A0A096LP49 1063 aa17.89■□□□□ 0.46
PDLIM5-205ENST00000380180 CD8B2A6NJW9 211 aa17.89■□□□□ 0.46
PDLIM5-205ENST00000380180 H3BML4 177 aa17.89■□□□□ 0.46
PDLIM5-205ENST00000380180 CTDSP2O14595 271 aa17.89■□□□□ 0.46
PDLIM5-205ENST00000380180 PLPP2O43688 288 aa17.89■□□□□ 0.46
PDLIM5-205ENST00000380180 CD8BP10966 210 aa17.89■□□□□ 0.46
PDLIM5-205ENST00000380180 TCEA1P23193 301 aaKnown RBP17.89■□□□□ 0.46
PDLIM5-205ENST00000380180 ACVR1BP36896 505 aa17.89■□□□□ 0.46
PDLIM5-205ENST00000380180 MLF1P58340 268 aa17.89■□□□□ 0.46
PDLIM5-205ENST00000380180 OR7A5Q15622 319 aa17.89■□□□□ 0.46
PDLIM5-205ENST00000380180 ARL9Q6T311 187 aa17.89■□□□□ 0.46
PDLIM5-205ENST00000380180 RPTNQ6XPR3 784 aa17.89■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms