RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 SLCO1C1Q9NYB5 712 aa7.02□□□□□ -1.28
CDKL5-202ENST00000379996 PRODH2Q9UF12 536 aa7.02□□□□□ -1.28
CDKL5-202ENST00000379996 NUFIP1Q9UHK0 495 aaKnown RBP7.02□□□□□ -1.28
CDKL5-202ENST00000379996 SIGLEC7Q9Y286 467 aa7.02□□□□□ -1.28
CDKL5-202ENST00000379996 ALG5Q9Y673 324 aa7.02□□□□□ -1.28
CDKL5-202ENST00000379996 EXPH5Q8NEV8 1989 aa7.02□□□□□ -1.28
CDKL5-202ENST00000379996 ZC3H12DA2A288 527 aaKnown RBP7.02□□□□□ -1.29
CDKL5-202ENST00000379996 SMIM30A4D0T7 59 aa7.02□□□□□ -1.29
CDKL5-202ENST00000379996 E9PI62 339 aa7.02□□□□□ -1.29
CDKL5-202ENST00000379996 RGS5O15539 181 aa7.02□□□□□ -1.29
CDKL5-202ENST00000379996 IDH3BO43837 385 aa7.02□□□□□ -1.29
CDKL5-202ENST00000379996 SLC43A1O75387 559 aa7.02□□□□□ -1.29
CDKL5-202ENST00000379996 DRD5P21918 477 aa7.02□□□□□ -1.29
CDKL5-202ENST00000379996 IFNGR2P38484 337 aa7.02□□□□□ -1.29
CDKL5-202ENST00000379996 EMP2P54851 167 aa7.02□□□□□ -1.29
CDKL5-202ENST00000379996 SOX8P57073 446 aa7.02□□□□□ -1.29
CDKL5-202ENST00000379996 RPS11P62280 158 aaKnown RBP eCLIP7.02□□□□□ -1.29
CDKL5-202ENST00000379996 CHAF1BQ13112 559 aa7.02□□□□□ -1.29
CDKL5-202ENST00000379996 GGTLC2Q14390 218 aa7.02□□□□□ -1.29
CDKL5-202ENST00000379996 EXT1Q16394 746 aa7.02□□□□□ -1.29
CDKL5-202ENST00000379996 CLEC12AQ5QGZ9 265 aa7.02□□□□□ -1.29
CDKL5-202ENST00000379996 DMKNQ6E0U4 476 aaPredicted RBP7.02□□□□□ -1.29
CDKL5-202ENST00000379996 H3F3CQ6NXT2 135 aa7.02□□□□□ -1.29
CDKL5-202ENST00000379996 DGAT2L6Q6ZPD8 337 aa7.02□□□□□ -1.29
CDKL5-202ENST00000379996 RNF113BQ8IZP6 322 aaKnown RBP7.02□□□□□ -1.29
CDKL5-202ENST00000379996 KLHL36Q8N4N3 616 aa7.02□□□□□ -1.29
CDKL5-202ENST00000379996 METTL27Q8N6F8 245 aaPredicted RBP7.02□□□□□ -1.29
CDKL5-202ENST00000379996 ASCC1Q8N9N2 400 aaKnown RBP7.02□□□□□ -1.29
CDKL5-202ENST00000379996 OR2T33Q8NG76 320 aa7.02□□□□□ -1.29
CDKL5-202ENST00000379996 OR5M3Q8NGP4 307 aa7.02□□□□□ -1.29
CDKL5-202ENST00000379996 MR1Q95460 341 aa7.02□□□□□ -1.29
CDKL5-202ENST00000379996 RBM18Q96H35 190 aaKnown RBP7.02□□□□□ -1.29
CDKL5-202ENST00000379996 SAMD8Q96LT4 415 aa7.02□□□□□ -1.29
CDKL5-202ENST00000379996 IMMP1LQ96LU5 166 aa7.02□□□□□ -1.29
CDKL5-202ENST00000379996 MCHR1Q99705 422 aa7.02□□□□□ -1.29
CDKL5-202ENST00000379996 PIGUQ9H490 435 aa7.02□□□□□ -1.29
CDKL5-202ENST00000379996 MMP25Q9NPA2 562 aa7.02□□□□□ -1.29
CDKL5-202ENST00000379996 CMC2Q9NRP2 79 aa7.02□□□□□ -1.29
CDKL5-202ENST00000379996 MKL2Q9ULH7 1088 aa7.02□□□□□ -1.29
CDKL5-202ENST00000379996 FARSAQ9Y285 508 aaKnown RBP7.02□□□□□ -1.29
CDKL5-202ENST00000379996 VPS13AQ96RL7 3174 aa7.02□□□□□ -1.29
CDKL5-202ENST00000379996 CENPBD1B2RD01 187 aa7.02□□□□□ -1.29
CDKL5-202ENST00000379996 AKAP8O43823 692 aaKnown RBP7.02□□□□□ -1.29
CDKL5-202ENST00000379996 ERAL1O75616 437 aaKnown RBP7.02□□□□□ -1.29
CDKL5-202ENST00000379996 HPP00738 406 aa7.02□□□□□ -1.29
CDKL5-202ENST00000379996 CT62P0C5K7 136 aa7.02□□□□□ -1.29
CDKL5-202ENST00000379996 COX6A1P12074 109 aa7.02□□□□□ -1.29
CDKL5-202ENST00000379996 NID1P14543 1247 aa7.02□□□□□ -1.29
CDKL5-202ENST00000379996 MAP2K3P46734 347 aa7.02□□□□□ -1.29
CDKL5-202ENST00000379996 EMDP50402 254 aa7.02□□□□□ -1.29
CDKL5-202ENST00000379996 PRKAG1P54619 331 aa7.02□□□□□ -1.29
CDKL5-202ENST00000379996 CLDN6P56747 220 aa7.02□□□□□ -1.29
CDKL5-202ENST00000379996 TATDN3Q17R31 274 aa7.02□□□□□ -1.29
CDKL5-202ENST00000379996 ZFP69Q49AA0 526 aa7.02□□□□□ -1.29
CDKL5-202ENST00000379996 CCDC92Q53HC0 331 aaPredicted RBP7.02□□□□□ -1.29
CDKL5-202ENST00000379996 HBMQ6B0K9 141 aa7.02□□□□□ -1.29
CDKL5-202ENST00000379996 MEPCEQ7L2J0 689 aaKnown RBP7.02□□□□□ -1.29
CDKL5-202ENST00000379996 DMRTC2Q8IXT2 367 aaPredicted RBP7.02□□□□□ -1.29
CDKL5-202ENST00000379996 DND1Q8IYX4 353 aaKnown RBP7.02□□□□□ -1.29
CDKL5-202ENST00000379996 ELP5Q8TE02 316 aa7.02□□□□□ -1.29
CDKL5-202ENST00000379996 RNF138Q8WVD3 245 aa7.02□□□□□ -1.29
CDKL5-202ENST00000379996 SPOCK3Q9BQ16 436 aa7.02□□□□□ -1.29
CDKL5-202ENST00000379996 OR52D1Q9H346 318 aa7.02□□□□□ -1.29
CDKL5-202ENST00000379996 INPP5EQ9NRR6 644 aa7.02□□□□□ -1.29
CDKL5-202ENST00000379996 AUP1Q9Y679 476 aa7.02□□□□□ -1.29
CDKL5-202ENST00000379996 GPR179Q6PRD1 2367 aa7.02□□□□□ -1.29
CDKL5-202ENST00000379996 C7orf66A4D0T2 115 aa7.01□□□□□ -1.29
CDKL5-202ENST00000379996 FRG2CA6NGY1 282 aa7.01□□□□□ -1.29
CDKL5-202ENST00000379996 PCNX2A6NKB5 2137 aa7.01□□□□□ -1.29
CDKL5-202ENST00000379996 OR10H2O60403 315 aa7.01□□□□□ -1.29
CDKL5-202ENST00000379996 SLC19A2O60779 497 aa7.01□□□□□ -1.29
CDKL5-202ENST00000379996 C1QBP02746 253 aa7.01□□□□□ -1.29
CDKL5-202ENST00000379996 HLA-DPB1P04440 258 aa7.01□□□□□ -1.29
CDKL5-202ENST00000379996 CD1AP06126 327 aa7.01□□□□□ -1.29
CDKL5-202ENST00000379996 EIF4EP06730 217 aaKnown RBP7.01□□□□□ -1.29
CDKL5-202ENST00000379996 RPS15P62841 145 aaKnown RBP7.01□□□□□ -1.29
CDKL5-202ENST00000379996 RUNX1T1Q06455 604 aa7.01□□□□□ -1.29
CDKL5-202ENST00000379996 TMEM81Q6P7N7 255 aa7.01□□□□□ -1.29
CDKL5-202ENST00000379996 NDUFAF7Q7L592 441 aa7.01□□□□□ -1.29
CDKL5-202ENST00000379996 CXXC5Q7LFL8 322 aaKnown RBP7.01□□□□□ -1.29
CDKL5-202ENST00000379996 SSX6Q7RTT6 188 aa7.01□□□□□ -1.29
CDKL5-202ENST00000379996 GRAMD2AQ8IUY3 354 aa7.01□□□□□ -1.29
CDKL5-202ENST00000379996 CPOQ8IVL8 374 aa7.01□□□□□ -1.29
CDKL5-202ENST00000379996 GID4Q8IVV7 300 aa7.01□□□□□ -1.29
CDKL5-202ENST00000379996 TMEM151BQ8IW70 566 aa7.01□□□□□ -1.29
CDKL5-202ENST00000379996 Q8N402 240 aa7.01□□□□□ -1.29
CDKL5-202ENST00000379996 RFLNBQ8N5W9 214 aa7.01□□□□□ -1.29
CDKL5-202ENST00000379996 NEIL3Q8TAT5 605 aa7.01□□□□□ -1.29
CDKL5-202ENST00000379996 ZNF417Q8TAU3 575 aa7.01□□□□□ -1.29
CDKL5-202ENST00000379996 SLC2A12Q8TD20 617 aa7.01□□□□□ -1.29
CDKL5-202ENST00000379996 METTL21AQ8WXB1 218 aa7.01□□□□□ -1.29
CDKL5-202ENST00000379996 TSLPQ969D9 159 aa7.01□□□□□ -1.29
CDKL5-202ENST00000379996 ADIPOR1Q96A54 375 aa7.01□□□□□ -1.29
CDKL5-202ENST00000379996 NTNG2Q96CW9 530 aa7.01□□□□□ -1.29
CDKL5-202ENST00000379996 FAM122AQ96E09 287 aa7.01□□□□□ -1.29
CDKL5-202ENST00000379996 C1GALT1C1Q96EU7 318 aa7.01□□□□□ -1.29
CDKL5-202ENST00000379996 ZNF587Q96SQ5 575 aaPredicted RBP7.01□□□□□ -1.29
CDKL5-202ENST00000379996 TTYH2Q9BSA4 534 aa7.01□□□□□ -1.29
CDKL5-202ENST00000379996 CRB3Q9BUF7 120 aa7.01□□□□□ -1.29
CDKL5-202ENST00000379996 HDHD5Q9BXW7 423 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms