RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 MPP4Q96JB8 637 aa14.75□□□□□ -0.05
HMGN4-201ENST00000377575 ALG2Q9H553 416 aa14.75□□□□□ -0.05
HMGN4-201ENST00000377575 ZNF701Q9NV72 531 aaPredicted RBP14.75□□□□□ -0.05
HMGN4-201ENST00000377575 MRPL39Q9NYK5 338 aaKnown RBP14.75□□□□□ -0.05
HMGN4-201ENST00000377575 CISD1Q9NZ45 108 aaKnown RBP14.75□□□□□ -0.05
HMGN4-201ENST00000377575 POU2F3Q9UKI9 436 aa14.75□□□□□ -0.05
HMGN4-201ENST00000377575 C2CD3Q4AC94 2353 aa14.74□□□□□ -0.05
HMGN4-201ENST00000377575 UPK3AO75631 287 aa14.74□□□□□ -0.05
HMGN4-201ENST00000377575 ZNF432O94892 652 aa14.74□□□□□ -0.05
HMGN4-201ENST00000377575 SOD3P08294 240 aa14.74□□□□□ -0.05
HMGN4-201ENST00000377575 DANCRP0C864 163 aa14.74□□□□□ -0.05
HMGN4-201ENST00000377575 CRYBA2P53672 197 aa14.74□□□□□ -0.05
HMGN4-201ENST00000377575 ATP5J2P56134 94 aa14.74□□□□□ -0.05
HMGN4-201ENST00000377575 LGALS3BPQ08380 585 aa14.74□□□□□ -0.05
HMGN4-201ENST00000377575 PUDPQ08623 228 aa14.74□□□□□ -0.05
HMGN4-201ENST00000377575 PMS2P3Q13401 168 aa14.74□□□□□ -0.05
HMGN4-201ENST00000377575 TTC33Q6PID6 262 aaPredicted RBP14.74□□□□□ -0.05
HMGN4-201ENST00000377575 SLC22A25Q6T423 547 aa14.74□□□□□ -0.05
HMGN4-201ENST00000377575 LINC00114Q6XXX2 140 aa14.74□□□□□ -0.05
HMGN4-201ENST00000377575 GPR137CQ8N3F9 429 aa14.74□□□□□ -0.05
HMGN4-201ENST00000377575 POU5F2Q8N7G0 328 aa14.74□□□□□ -0.05
HMGN4-201ENST00000377575 PIK3C3Q8NEB9 887 aa14.74□□□□□ -0.05
HMGN4-201ENST00000377575 ANKK1Q8NFD2 765 aa14.74□□□□□ -0.05
HMGN4-201ENST00000377575 OR2T12Q8NG77 320 aa14.74□□□□□ -0.05
HMGN4-201ENST00000377575 OR4D11Q8NGI4 311 aa14.74□□□□□ -0.05
HMGN4-201ENST00000377575 GTPBP3Q969Y2 492 aaKnown RBP14.74□□□□□ -0.05
HMGN4-201ENST00000377575 ZNF583Q96ND8 569 aa14.74□□□□□ -0.05
HMGN4-201ENST00000377575 MOGAT1Q96PD6 335 aa14.74□□□□□ -0.05
HMGN4-201ENST00000377575 POLR2J2Q9GZM3 115 aaKnown RBP14.74□□□□□ -0.05
HMGN4-201ENST00000377575 POLR2J3Q9H1A7 115 aaKnown RBP14.74□□□□□ -0.05
HMGN4-201ENST00000377575 SLC7A7Q9UM01 511 aa14.74□□□□□ -0.05
HMGN4-201ENST00000377575 NOX1Q9Y5S8 564 aa14.74□□□□□ -0.05
HMGN4-201ENST00000377575 USF3Q68DE3 2245 aa14.73□□□□□ -0.05
HMGN4-201ENST00000377575 TRAF3IP2O43734 574 aaPredicted RBP14.73□□□□□ -0.05
HMGN4-201ENST00000377575 COX4I1P13073 169 aa14.73□□□□□ -0.05
HMGN4-201ENST00000377575 UBE2NP61088 152 aaKnown RBP14.73□□□□□ -0.05
HMGN4-201ENST00000377575 SLC25A3Q00325 362 aa14.73□□□□□ -0.05
HMGN4-201ENST00000377575 ROR2Q01974 943 aaKnown RBP14.73□□□□□ -0.05
HMGN4-201ENST00000377575 POU3F1Q03052 451 aaPredicted RBP14.73□□□□□ -0.05
HMGN4-201ENST00000377575 SPOCK1Q08629 439 aa14.73□□□□□ -0.05
HMGN4-201ENST00000377575 TBRG1Q3YBR2 411 aa14.73□□□□□ -0.05
HMGN4-201ENST00000377575 LRRC23Q53EV4 343 aaPredicted RBP14.73□□□□□ -0.05
HMGN4-201ENST00000377575 HIKESHIQ53FT3 197 aa14.73□□□□□ -0.05
HMGN4-201ENST00000377575 SPATA21Q7Z572 469 aa14.73□□□□□ -0.05
HMGN4-201ENST00000377575 CARM1Q86X55 608 aa14.73□□□□□ -0.05
HMGN4-201ENST00000377575 RBM45Q8IUH3 476 aaKnown RBP14.73□□□□□ -0.05
HMGN4-201ENST00000377575 OR5J2Q8NH18 312 aa14.73□□□□□ -0.05
HMGN4-201ENST00000377575 TRMT61AQ96FX7 289 aaKnown RBP14.73□□□□□ -0.05
HMGN4-201ENST00000377575 C18orf12Q96KH6 178 aa14.73□□□□□ -0.05
HMGN4-201ENST00000377575 Q96MF0 132 aa14.73□□□□□ -0.05
HMGN4-201ENST00000377575 OR2M2Q96R28 347 aa14.73□□□□□ -0.05
HMGN4-201ENST00000377575 SLC19A3Q9BZV2 496 aa14.73□□□□□ -0.05
HMGN4-201ENST00000377575 NSRP1Q9H0G5 558 aaKnown RBP14.73□□□□□ -0.05
HMGN4-201ENST00000377575 FKRPQ9H9S5 495 aa14.73□□□□□ -0.05
HMGN4-201ENST00000377575 MOV10Q9HCE1 1003 aaKnown RBP14.73□□□□□ -0.05
HMGN4-201ENST00000377575 SH3GLB1Q9Y371 365 aa14.73□□□□□ -0.05
HMGN4-201ENST00000377575 MS4A18H0YCH9 400 aa14.72□□□□□ -0.05
HMGN4-201ENST00000377575 RPL36A-HNRNPH2H7BZ11 118 aa14.72□□□□□ -0.05
HMGN4-201ENST00000377575 OR6A2O95222 327 aa14.72□□□□□ -0.05
HMGN4-201ENST00000377575 HPRP00739 348 aa14.72□□□□□ -0.05
HMGN4-201ENST00000377575 TAS2R41P59536 307 aa14.72□□□□□ -0.05
HMGN4-201ENST00000377575 LTBQ06643 244 aa14.72□□□□□ -0.05
HMGN4-201ENST00000377575 PGGHGQ32M88 737 aa14.72□□□□□ -0.05
HMGN4-201ENST00000377575 MS4A18Q3C1V0 323 aa14.72□□□□□ -0.05
HMGN4-201ENST00000377575 AGAP6Q5VW22 663 aa14.72□□□□□ -0.05
HMGN4-201ENST00000377575 ANKRD16Q6P6B7 361 aa14.72□□□□□ -0.05
HMGN4-201ENST00000377575 WDR88Q6ZMY6 472 aa14.72□□□□□ -0.05
HMGN4-201ENST00000377575 LINGO2Q7L985 606 aa14.72□□□□□ -0.05
HMGN4-201ENST00000377575 BIVMQ86UB2 503 aa14.72□□□□□ -0.05
HMGN4-201ENST00000377575 MICU2Q8IYU8 434 aa14.72□□□□□ -0.05
HMGN4-201ENST00000377575 MAGEE2Q8TD90 523 aaPredicted RBP14.72□□□□□ -0.05
HMGN4-201ENST00000377575 BDH2Q9BUT1 245 aa14.72□□□□□ -0.05
HMGN4-201ENST00000377575 C1QTNF6Q9BXI9 259 aa14.72□□□□□ -0.05
HMGN4-201ENST00000377575 B3GAT2Q9NPZ5 323 aa14.72□□□□□ -0.05
HMGN4-201ENST00000377575 USP22Q9UPT9 525 aa14.72□□□□□ -0.05
HMGN4-201ENST00000377575 ARPC4-TTLL3A0A0A6YYG9 625 aa14.71□□□□□ -0.05
HMGN4-201ENST00000377575 ELOVL7A1L3X0 281 aa14.71□□□□□ -0.05
HMGN4-201ENST00000377575 LRRN3E7EW58 273 aa14.71□□□□□ -0.05
HMGN4-201ENST00000377575 OVOL3O00110 214 aa14.71□□□□□ -0.05
HMGN4-201ENST00000377575 KPNA4O00629 521 aaPredicted RBP14.71□□□□□ -0.05
HMGN4-201ENST00000377575 PLPP3O14495 311 aa14.71□□□□□ -0.05
HMGN4-201ENST00000377575 LYPD3O95274 346 aa14.71□□□□□ -0.05
HMGN4-201ENST00000377575 THY1P04216 161 aa14.71□□□□□ -0.05
HMGN4-201ENST00000377575 INHBBP09529 407 aa14.71□□□□□ -0.05
HMGN4-201ENST00000377575 ADORA3P0DMS8 318 aa14.71□□□□□ -0.05
HMGN4-201ENST00000377575 HOXB1P14653 301 aaPredicted RBP14.71□□□□□ -0.05
HMGN4-201ENST00000377575 AHCYP23526 432 aa14.71□□□□□ -0.05
HMGN4-201ENST00000377575 ETFDHQ16134 617 aa14.71□□□□□ -0.05
HMGN4-201ENST00000377575 ZNF74Q16587 644 aa14.71□□□□□ -0.05
HMGN4-201ENST00000377575 DEF8Q6ZN54 512 aa14.71□□□□□ -0.05
HMGN4-201ENST00000377575 PXKQ7Z7A4 578 aa14.71□□□□□ -0.05
HMGN4-201ENST00000377575 DTX2Q86UW9 622 aa14.71□□□□□ -0.05
HMGN4-201ENST00000377575 TMEM123Q8N131 208 aa14.71□□□□□ -0.05
HMGN4-201ENST00000377575 DHRS9Q9BPW9 319 aa14.71□□□□□ -0.05
HMGN4-201ENST00000377575 KCNS3Q9BQ31 491 aa14.71□□□□□ -0.05
HMGN4-201ENST00000377575 ZNF426Q9BUY5 554 aa14.71□□□□□ -0.05
HMGN4-201ENST00000377575 TRAF4Q9BUZ4 470 aaPredicted RBP14.71□□□□□ -0.05
HMGN4-201ENST00000377575 GRIP2Q9C0E4 1043 aa14.71□□□□□ -0.05
HMGN4-201ENST00000377575 GPR35Q9HC97 309 aa14.71□□□□□ -0.05
HMGN4-201ENST00000377575 NANSQ9NR45 359 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms