RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 IRF2P14316 349 aa12.56□□□□□ -0.4
C9orf47-203ENST00000375851 MTNR1BP49286 362 aa12.56□□□□□ -0.4
C9orf47-203ENST00000375851 C1orf140Q5VVS0 124 aa12.56□□□□□ -0.4
C9orf47-203ENST00000375851 HACD4Q5VWC8 232 aa12.56□□□□□ -0.4
C9orf47-203ENST00000375851 CCDC28AQ8IWP9 274 aa12.56□□□□□ -0.4
C9orf47-203ENST00000375851 RIMKLAQ8IXN7 391 aa12.56□□□□□ -0.4
C9orf47-203ENST00000375851 PDZD9Q8IXQ8 264 aa12.56□□□□□ -0.4
C9orf47-203ENST00000375851 CNEP1R1Q8N9A8 125 aa12.56□□□□□ -0.4
C9orf47-203ENST00000375851 ZNF454Q8N9F8 522 aa12.56□□□□□ -0.4
C9orf47-203ENST00000375851 EID2BQ96D98 161 aa12.56□□□□□ -0.4
C9orf47-203ENST00000375851 SGCZQ96LD1 299 aa12.56□□□□□ -0.4
C9orf47-203ENST00000375851 SORCS2Q96PQ0 1159 aa12.56□□□□□ -0.4
C9orf47-203ENST00000375851 TEAD3Q99594 435 aa12.56□□□□□ -0.4
C9orf47-203ENST00000375851 NOX4Q9NPH5 578 aa12.56□□□□□ -0.4
C9orf47-203ENST00000375851 WIF1Q9Y5W5 379 aa12.56□□□□□ -0.4
C9orf47-203ENST00000375851 B3GALT1Q9Y5Z6 326 aa12.56□□□□□ -0.4
C9orf47-203ENST00000375851 ABCA3Q99758 1704 aa12.55□□□□□ -0.4
C9orf47-203ENST00000375851 A0A0A6YYH2 397 aa12.55□□□□□ -0.4
C9orf47-203ENST00000375851 TRDV1A0A1B0GX56 115 aa12.55□□□□□ -0.4
C9orf47-203ENST00000375851 A6NJ64 397 aa12.55□□□□□ -0.4
C9orf47-203ENST00000375851 UPK1AO00322 258 aa12.55□□□□□ -0.4
C9orf47-203ENST00000375851 GAPDHSO14556 408 aaPredicted RBP12.55□□□□□ -0.4
C9orf47-203ENST00000375851 PRR35P0CG20 571 aa12.55□□□□□ -0.4
C9orf47-203ENST00000375851 LIPCP11150 499 aa12.55□□□□□ -0.4
C9orf47-203ENST00000375851 TCN2P20062 427 aa12.55□□□□□ -0.4
C9orf47-203ENST00000375851 HTR2AP28223 471 aa12.55□□□□□ -0.4
C9orf47-203ENST00000375851 RIPPLY1Q0D2K3 151 aa12.55□□□□□ -0.4
C9orf47-203ENST00000375851 MEF2DQ14814 521 aa12.55□□□□□ -0.4
C9orf47-203ENST00000375851 CAMKMTQ7Z624 323 aa12.55□□□□□ -0.4
C9orf47-203ENST00000375851 FAM26EQ8N5C1 309 aa12.55□□□□□ -0.4
C9orf47-203ENST00000375851 CCDC71LQ8N9Z2 235 aa12.55□□□□□ -0.4
C9orf47-203ENST00000375851 UTP23Q9BRU9 249 aaKnown RBP12.55□□□□□ -0.4
C9orf47-203ENST00000375851 KLHL13Q9P2N7 655 aa12.55□□□□□ -0.4
C9orf47-203ENST00000375851 EIF4E2O60573 245 aaKnown RBP12.55□□□□□ -0.4
C9orf47-203ENST00000375851 KCNK2O95069 426 aa12.55□□□□□ -0.4
C9orf47-203ENST00000375851 IFNGR1P15260 489 aa12.55□□□□□ -0.4
C9orf47-203ENST00000375851 MSX1P28360 303 aa12.55□□□□□ -0.4
C9orf47-203ENST00000375851 GCH1P30793 250 aa12.55□□□□□ -0.4
C9orf47-203ENST00000375851 RGS19P49795 217 aa12.55□□□□□ -0.4
C9orf47-203ENST00000375851 BTG2P78543 158 aa12.55□□□□□ -0.4
C9orf47-203ENST00000375851 HTRA4P83105 476 aaPredicted RBP12.55□□□□□ -0.4
C9orf47-203ENST00000375851 SF3B4Q15427 424 aaKnown RBP eCLIP12.55□□□□□ -0.4
C9orf47-203ENST00000375851 NIPAL3Q6P499 406 aa12.55□□□□□ -0.4
C9orf47-203ENST00000375851 LINC00346Q8IVM7 164 aa12.55□□□□□ -0.4
C9orf47-203ENST00000375851 MKXQ8IYA7 352 aa12.55□□□□□ -0.4
C9orf47-203ENST00000375851 SLC43A2Q8N370 569 aa12.55□□□□□ -0.4
C9orf47-203ENST00000375851 KDM8Q8N371 416 aa12.55□□□□□ -0.4
C9orf47-203ENST00000375851 PIGCQ92535 297 aa12.55□□□□□ -0.4
C9orf47-203ENST00000375851 TM9SF4Q92544 642 aa12.55□□□□□ -0.4
C9orf47-203ENST00000375851 CCDC74AQ96AQ1 378 aa12.55□□□□□ -0.4
C9orf47-203ENST00000375851 DUSP21Q9H596 190 aa12.55□□□□□ -0.4
C9orf47-203ENST00000375851 NPFFR2Q9Y5X5 522 aa12.55□□□□□ -0.4
C9orf47-203ENST00000375851 IDSB3KWA1 339 aa12.55□□□□□ -0.4
C9orf47-203ENST00000375851 SERPINA2P20848 420 aa12.55□□□□□ -0.4
C9orf47-203ENST00000375851 EIF1P41567 113 aaKnown RBP12.55□□□□□ -0.4
C9orf47-203ENST00000375851 DUSP8Q13202 625 aa12.55□□□□□ -0.4
C9orf47-203ENST00000375851 STEAP3Q658P3 488 aa12.55□□□□□ -0.4
C9orf47-203ENST00000375851 TMEM215Q68D42 235 aa12.55□□□□□ -0.4
C9orf47-203ENST00000375851 APOOLQ6UXV4 268 aa12.55□□□□□ -0.4
C9orf47-203ENST00000375851 ESPNLQ6ZVH7 1005 aa12.55□□□□□ -0.4
C9orf47-203ENST00000375851 GRINAQ7Z429 371 aa12.55□□□□□ -0.4
C9orf47-203ENST00000375851 LGALS14Q8TCE9 139 aa12.55□□□□□ -0.4
C9orf47-203ENST00000375851 ARSGQ96EG1 525 aa12.55□□□□□ -0.4
C9orf47-203ENST00000375851 ZNF486Q96H40 463 aaPredicted RBP12.55□□□□□ -0.4
C9orf47-203ENST00000375851 COL24A1Q17RW2 1714 aa12.55□□□□□ -0.4
C9orf47-203ENST00000375851 F10P00742 488 aa12.55□□□□□ -0.4
C9orf47-203ENST00000375851 APOC3P02656 99 aa12.55□□□□□ -0.4
C9orf47-203ENST00000375851 GLULP15104 373 aa12.55□□□□□ -0.4
C9orf47-203ENST00000375851 HTR5AP47898 357 aa12.55□□□□□ -0.4
C9orf47-203ENST00000375851 DLX5P56178 289 aa12.55□□□□□ -0.4
C9orf47-203ENST00000375851 TAS2R19P59542 299 aa12.55□□□□□ -0.4
C9orf47-203ENST00000375851 ZNF767PQ75MW2 155 aa12.55□□□□□ -0.4
C9orf47-203ENST00000375851 ANKRD53Q8N9V6 530 aa12.55□□□□□ -0.4
C9orf47-203ENST00000375851 HINT3Q9NQE9 182 aaKnown RBP12.55□□□□□ -0.4
C9orf47-203ENST00000375851 SBK2P0C263 348 aa12.54□□□□□ -0.4
C9orf47-203ENST00000375851 CAPZBP47756 277 aa12.54□□□□□ -0.4
C9orf47-203ENST00000375851 TAS2R31P59538 309 aa12.54□□□□□ -0.4
C9orf47-203ENST00000375851 SEC61A1P61619 476 aaKnown RBP12.54□□□□□ -0.4
C9orf47-203ENST00000375851 IL13RA1P78552 427 aa12.54□□□□□ -0.4
C9orf47-203ENST00000375851 ZNF616Q08AN1 781 aa12.54□□□□□ -0.4
C9orf47-203ENST00000375851 RUNX2Q13950 521 aa12.54□□□□□ -0.4
C9orf47-203ENST00000375851 TMEM179BQ7Z7N9 219 aa12.54□□□□□ -0.4
C9orf47-203ENST00000375851 RPS19BP1Q86WX3 136 aaKnown RBP12.54□□□□□ -0.4
C9orf47-203ENST00000375851 CMTM1Q8IZ96 169 aa12.54□□□□□ -0.4
C9orf47-203ENST00000375851 CPT1CQ8TCG5 803 aa12.54□□□□□ -0.4
C9orf47-203ENST00000375851 PRAMEF25A6NGN4 478 aa12.54□□□□□ -0.4
C9orf47-203ENST00000375851 GLCEO94923 617 aa12.54□□□□□ -0.4
C9orf47-203ENST00000375851 CDK2P24941 298 aa12.54□□□□□ -0.4
C9orf47-203ENST00000375851 ATP1B3P54709 279 aa12.54□□□□□ -0.4
C9orf47-203ENST00000375851 ZNF620Q6ZNG0 422 aa12.54□□□□□ -0.4
C9orf47-203ENST00000375851 PM20D2Q8IYS1 436 aa12.54□□□□□ -0.4
C9orf47-203ENST00000375851 PRR18Q8N4B5 295 aa12.54□□□□□ -0.4
C9orf47-203ENST00000375851 NANOGP1Q8N7R0 232 aa12.54□□□□□ -0.4
C9orf47-203ENST00000375851 STT3BQ8TCJ2 826 aa12.54□□□□□ -0.4
C9orf47-203ENST00000375851 TSNAXQ99598 290 aaKnown RBP12.54□□□□□ -0.4
C9orf47-203ENST00000375851 RPP25Q9BUL9 199 aaKnown RBP12.54□□□□□ -0.4
C9orf47-203ENST00000375851 HINT2Q9BX68 163 aa12.54□□□□□ -0.4
C9orf47-203ENST00000375851 EMC9Q9Y3B6 208 aa12.54□□□□□ -0.4
C9orf47-203ENST00000375851 FAM186AA6NE01 2351 aa12.54□□□□□ -0.4
C9orf47-203ENST00000375851 TPRP12270 2363 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms