RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 METTL17Q9H7H0 456 aaPredicted RBP10.7□□□□□ -0.7
VCL-202ENST00000372755 TMEM72A0PK05 275 aa10.7□□□□□ -0.7
VCL-202ENST00000372755 LRRC30A6NM36 301 aa10.7□□□□□ -0.7
VCL-202ENST00000372755 NAGAP17050 411 aa10.7□□□□□ -0.7
VCL-202ENST00000372755 BLVRBP30043 206 aaPredicted RBP10.7□□□□□ -0.7
VCL-202ENST00000372755 GJA4P35212 333 aa10.7□□□□□ -0.7
VCL-202ENST00000372755 OR8B8Q15620 311 aa10.7□□□□□ -0.7
VCL-202ENST00000372755 FAM199XQ6PEV8 388 aaPredicted RBP10.7□□□□□ -0.7
VCL-202ENST00000372755 DPY19L2P2Q6ZN68 376 aa10.7□□□□□ -0.7
VCL-202ENST00000372755 PRICKLE2Q7Z3G6 844 aa10.7□□□□□ -0.7
VCL-202ENST00000372755 EGFL6Q8IUX8 553 aa10.7□□□□□ -0.7
VCL-202ENST00000372755 GCNT2Q8N0V5 402 aa10.7□□□□□ -0.7
VCL-202ENST00000372755 PNPLA1Q8N8W4 532 aa10.7□□□□□ -0.7
VCL-202ENST00000372755 GATA6Q92908 595 aa10.7□□□□□ -0.7
VCL-202ENST00000372755 SLC46A1Q96NT5 459 aa10.7□□□□□ -0.7
VCL-202ENST00000372755 TWSG1Q9GZX9 223 aa10.7□□□□□ -0.7
VCL-202ENST00000372755 SLCO5A1Q9H2Y9 848 aa10.7□□□□□ -0.7
VCL-202ENST00000372755 GFOD1Q9NXC2 390 aa10.7□□□□□ -0.7
VCL-202ENST00000372755 USP3Q9Y6I4 520 aa10.7□□□□□ -0.7
VCL-202ENST00000372755 A0A0B4J2A0 478 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 K7EQM0 130 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 ABHD16AO95870 558 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 EDN1P05305 212 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 GSTP1P09211 210 aaKnown RBP10.69□□□□□ -0.7
VCL-202ENST00000372755 SNRPBP14678 240 aaKnown RBP10.69□□□□□ -0.7
VCL-202ENST00000372755 ADRA1AP35348 466 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 GDNFP39905 211 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 NRG4Q8WWG1 115 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 HSD17B8Q92506 261 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 ISYNA1Q9NPH2 558 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 NPAP1Q9NZP6 1156 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 SHPKQ9UHJ6 478 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.69□□□□□ -0.7
VCL-202ENST00000372755 NXPH2O95156 264 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 HOXD9P28356 352 aaPredicted RBP10.69□□□□□ -0.7
VCL-202ENST00000372755 LGALS4P56470 323 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 B3GLCTQ6Y288 498 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 TAS1R1Q7RTX1 841 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 SLC30A7Q8NEW0 376 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 RLN3Q8WXF3 142 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 EGLN2Q96KS0 407 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 ABHD6Q9BV23 337 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 OR52A5Q9H2C5 316 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 DNAJC25-GNG10A0A024R161 153 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 ACOD1A6NK06 481 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 C4orf47A7E2U8 309 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 SPINT2O43291 252 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 PRAMEF4O60810 478 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 ATXN1LP0C7T5 689 aaKnown RBP10.69□□□□□ -0.7
VCL-202ENST00000372755 SLC2A1P11166 492 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 VEGFBP49765 207 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 ZNF133P52736 654 aaPredicted RBP10.69□□□□□ -0.7
VCL-202ENST00000372755 BIDP55957 195 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 DEFB103AP81534 67 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 DBPQ10586 325 aaPredicted RBP10.69□□□□□ -0.7
VCL-202ENST00000372755 TMEM130Q8N3G9 435 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 OR1E3Q8WZA6 343 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 BOD1Q96IK1 185 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 ZNF582Q96NG8 517 aaPredicted RBP10.69□□□□□ -0.7
VCL-202ENST00000372755 TNFRSF13CQ96RJ3 184 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.69□□□□□ -0.74e-6■■■□□ 15.2
VCL-202ENST00000372755 SSUH2Q9Y2M2 353 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 GPR171O14626 319 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 HEXAP06865 529 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 FABP1P07148 127 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 RPS25P62851 125 aaKnown RBP10.69□□□□□ -0.7
VCL-202ENST00000372755 ZNF266Q14584 549 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 KCNJ8Q15842 424 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 ADAMTSL4Q6UY14 1074 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 SLC35D2Q76EJ3 337 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 NKAIN3Q8N8D7 197 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 FAM213BQ8TBF2 198 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 STT3BQ8TCJ2 826 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 CALHM2Q9HA72 323 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 OSGIN1Q9UJX0 560 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 BTBD17A6NE02 478 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 KLRC4-KLRK1H3BQV0 150 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 GFRA2O00451 464 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 SCG5P05408 212 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 UBE2G2P60604 165 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 GABREP78334 506 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 TAZQ16635 292 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 OGFOD3Q6PK18 319 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 WDR88Q6ZMY6 472 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 LGALS14Q8TCE9 139 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 OR6C1Q96RD1 312 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 A4GALTQ9NPC4 353 aa10.69□□□□□ -0.7
VCL-202ENST00000372755 PUS1Q9Y606 427 aaKnown RBP eCLIP10.69□□□□□ -0.7
VCL-202ENST00000372755 ZNF732B4DXR9 585 aa10.68□□□□□ -0.7
VCL-202ENST00000372755 H7C1C5 153 aa10.68□□□□□ -0.7
VCL-202ENST00000372755 ALPLP05186 524 aa10.68□□□□□ -0.7
VCL-202ENST00000372755 BMP1P13497 986 aa10.68□□□□□ -0.7
VCL-202ENST00000372755 CNR1P21554 472 aa10.68□□□□□ -0.7
VCL-202ENST00000372755 AADACP22760 399 aa10.68□□□□□ -0.7
VCL-202ENST00000372755 OMGP23515 440 aa10.68□□□□□ -0.7
VCL-202ENST00000372755 LCN6P62502 163 aa10.68□□□□□ -0.7
VCL-202ENST00000372755 PRAMEF20Q5VT98 475 aa10.68□□□□□ -0.7
VCL-202ENST00000372755 CLEC14AQ86T13 490 aa10.68□□□□□ -0.7
VCL-202ENST00000372755 FAM109AQ8N4B1 249 aa10.68□□□□□ -0.7
VCL-202ENST00000372755 CLDN22Q8N7P3 220 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms