RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 A0A1W2PQL4 384 aaPredicted RBP10.66□□□□□ -0.7
SYNE1-204ENST00000367248 PAHP00439 452 aa10.66□□□□□ -0.7
SYNE1-204ENST00000367248 MCCD1P59942 119 aaPredicted RBP10.66□□□□□ -0.7
SYNE1-204ENST00000367248 SH2D5Q6ZV89 423 aa10.66□□□□□ -0.7
SYNE1-204ENST00000367248 MORN4Q8NDC4 146 aa10.66□□□□□ -0.7
SYNE1-204ENST00000367248 OR5D14Q8NGL3 314 aa10.66□□□□□ -0.7
SYNE1-204ENST00000367248 KLF13Q9Y2Y9 288 aaPredicted RBP10.66□□□□□ -0.7
SYNE1-204ENST00000367248 KNG1P01042 644 aa10.66□□□□□ -0.7
SYNE1-204ENST00000367248 ZGLP1P0C6A0 271 aa10.66□□□□□ -0.7
SYNE1-204ENST00000367248 ATP1B3P54709 279 aa10.66□□□□□ -0.7
SYNE1-204ENST00000367248 IL10RAQ13651 578 aa10.66□□□□□ -0.7
SYNE1-204ENST00000367248 RUNX2Q13950 521 aa10.66□□□□□ -0.7
SYNE1-204ENST00000367248 B3GLCTQ6Y288 498 aa10.66□□□□□ -0.7
SYNE1-204ENST00000367248 OR11G2Q8NGC1 345 aa10.66□□□□□ -0.7
SYNE1-204ENST00000367248 HRASLS5Q96KN8 279 aa10.66□□□□□ -0.7
SYNE1-204ENST00000367248 EMC6Q9BV81 110 aa10.66□□□□□ -0.7
SYNE1-204ENST00000367248 MEIS3P1A6NDR6 274 aa10.66□□□□□ -0.7
SYNE1-204ENST00000367248 TSPAN4O14817 238 aa10.66□□□□□ -0.7
SYNE1-204ENST00000367248 OR2G6Q5TZ20 316 aa10.66□□□□□ -0.7
SYNE1-204ENST00000367248 SFRP4Q6FHJ7 346 aaPredicted RBP10.66□□□□□ -0.7
SYNE1-204ENST00000367248 NAXDQ8IW45 347 aa10.66□□□□□ -0.7
SYNE1-204ENST00000367248 RSPRY1Q96DX4 576 aa10.66□□□□□ -0.7
SYNE1-204ENST00000367248 MNTQ99583 582 aa10.66□□□□□ -0.7
SYNE1-204ENST00000367248 SMCHD1A6NHR9 2005 aa10.66□□□□□ -0.7
SYNE1-204ENST00000367248 C7orf72A4D263 438 aa10.66□□□□□ -0.7
SYNE1-204ENST00000367248 FIGNL2A6NMB9 653 aa10.66□□□□□ -0.7
SYNE1-204ENST00000367248 FCMRO60667 390 aa10.66□□□□□ -0.7
SYNE1-204ENST00000367248 TRIM23P36406 574 aa10.66□□□□□ -0.7
SYNE1-204ENST00000367248 MKXQ8IYA7 352 aa10.66□□□□□ -0.7
SYNE1-204ENST00000367248 ZNF454Q8N9F8 522 aa10.66□□□□□ -0.7
SYNE1-204ENST00000367248 MICU1Q9BPX6 476 aa10.66□□□□□ -0.7
SYNE1-204ENST00000367248 UFSP2Q9NUQ7 469 aa10.66□□□□□ -0.7
SYNE1-204ENST00000367248 A0A0A6YYH2 397 aa10.65□□□□□ -0.7
SYNE1-204ENST00000367248 A6NJ64 397 aa10.65□□□□□ -0.7
SYNE1-204ENST00000367248 H7C417 338 aa10.65□□□□□ -0.7
SYNE1-204ENST00000367248 ETHE1O95571 254 aa10.65□□□□□ -0.7
SYNE1-204ENST00000367248 HAGHLQ6PII5 290 aaPredicted RBP10.65□□□□□ -0.7
SYNE1-204ENST00000367248 CSNK2A3Q8NEV1 391 aa10.65□□□□□ -0.7
SYNE1-204ENST00000367248 OR5D18Q8NGL1 313 aa10.65□□□□□ -0.7
SYNE1-204ENST00000367248 SLC7A13Q8TCU3 470 aa10.65□□□□□ -0.7
SYNE1-204ENST00000367248 CCDC86Q9H6F5 360 aaKnown RBP10.65□□□□□ -0.7
SYNE1-204ENST00000367248 TNFRSF12AQ9NP84 129 aa10.65□□□□□ -0.7
SYNE1-204ENST00000367248 TMEM72A0PK05 275 aa10.65□□□□□ -0.7
SYNE1-204ENST00000367248 HMGN4O00479 90 aa10.65□□□□□ -0.7
SYNE1-204ENST00000367248 CD160O95971 181 aa10.65□□□□□ -0.7
SYNE1-204ENST00000367248 DRD3P35462 400 aa10.65□□□□□ -0.7
SYNE1-204ENST00000367248 P2RX1P51575 399 aa10.65□□□□□ -0.7
SYNE1-204ENST00000367248 FAPQ12884 760 aa10.65□□□□□ -0.7
SYNE1-204ENST00000367248 EDDM3AQ14507 147 aa10.65□□□□□ -0.7
SYNE1-204ENST00000367248 DPY19L2P2Q6ZN68 376 aa10.65□□□□□ -0.7
SYNE1-204ENST00000367248 CA5BP1Q8WTZ4 195 aa10.65□□□□□ -0.7
SYNE1-204ENST00000367248 ADAMTS14Q8WXS8 1223 aa10.65□□□□□ -0.7
SYNE1-204ENST00000367248 GATA6Q92908 595 aa10.65□□□□□ -0.7
SYNE1-204ENST00000367248 RRNAD1Q96FB5 475 aaKnown RBP10.65□□□□□ -0.7
SYNE1-204ENST00000367248 IER2Q9BTL4 223 aa10.65□□□□□ -0.7
SYNE1-204ENST00000367248 CCDC32Q9BV29 185 aa10.65□□□□□ -0.7
SYNE1-204ENST00000367248 TP63Q9H3D4 680 aaPredicted RBP10.65□□□□□ -0.7
SYNE1-204ENST00000367248 ERVK13-1Q9NX77 482 aa10.65□□□□□ -0.7
SYNE1-204ENST00000367248 CDK5RAP2Q96SN8 1893 aa10.65□□□□□ -0.7
SYNE1-204ENST00000367248 IGHV1OR15-9A0A0B4J2B8 117 aa10.65□□□□□ -0.7
SYNE1-204ENST00000367248 ZNF593O00488 134 aaPredicted RBP10.65□□□□□ -0.7
SYNE1-204ENST00000367248 MT-ATP6P00846 226 aa10.65□□□□□ -0.7
SYNE1-204ENST00000367248 LPLP06858 475 aa10.65□□□□□ -0.7
SYNE1-204ENST00000367248 SPOCK1Q08629 439 aa10.65□□□□□ -0.7
SYNE1-204ENST00000367248 MLLT11Q13015 90 aaPredicted RBP10.65□□□□□ -0.7
SYNE1-204ENST00000367248 SLC36A2Q495M3 483 aa10.65□□□□□ -0.7
SYNE1-204ENST00000367248 NXNL2Q5VZ03 156 aa10.65□□□□□ -0.7
SYNE1-204ENST00000367248 BEST3Q8N1M1 668 aa10.65□□□□□ -0.7
SYNE1-204ENST00000367248 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.65□□□□□ -0.7
SYNE1-204ENST00000367248 TRAPPC2LH3BP13 241 aa10.65□□□□□ -0.7
SYNE1-204ENST00000367248 TP53P04637 393 aaPredicted RBP10.65□□□□□ -0.7
SYNE1-204ENST00000367248 LSSP48449 732 aa10.65□□□□□ -0.7
SYNE1-204ENST00000367248 NXPH1P58417 271 aa10.65□□□□□ -0.7
SYNE1-204ENST00000367248 DUSP7Q16829 419 aa10.65□□□□□ -0.7
SYNE1-204ENST00000367248 GDPD1Q8N9F7 314 aa10.65□□□□□ -0.7
SYNE1-204ENST00000367248 OR5H2Q8NGV7 314 aa10.65□□□□□ -0.7
SYNE1-204ENST00000367248 ZNF471Q9BX82 626 aaPredicted RBP10.65□□□□□ -0.7
SYNE1-204ENST00000367248 MED20Q9H944 212 aa10.65□□□□□ -0.7
SYNE1-204ENST00000367248 ENPP5Q9UJA9 477 aa10.65□□□□□ -0.7
SYNE1-204ENST00000367248 DNAJC13O75165 2243 aa10.65□□□□□ -0.7
SYNE1-204ENST00000367248 RREB1Q92766 1687 aa10.65□□□□□ -0.7
SYNE1-204ENST00000367248 A0A1B0GTL3 188 aa10.65□□□□□ -0.7
SYNE1-204ENST00000367248 APEHP13798 732 aaKnown RBP10.65□□□□□ -0.7
SYNE1-204ENST00000367248 MFAP5Q13361 173 aa10.65□□□□□ -0.7
SYNE1-204ENST00000367248 ARHGAP11BQ3KRB8 267 aa10.65□□□□□ -0.7
SYNE1-204ENST00000367248 CCBE1Q6UXH8 406 aaPredicted RBP10.65□□□□□ -0.7
SYNE1-204ENST00000367248 TMEM200AQ86VY9 491 aa10.65□□□□□ -0.7
SYNE1-204ENST00000367248 C16orf52Q8NHV5 167 aa10.65□□□□□ -0.7
SYNE1-204ENST00000367248 SEMA4CQ9C0C4 833 aa10.65□□□□□ -0.7
SYNE1-204ENST00000367248 UBQLN3Q9H347 655 aa10.65□□□□□ -0.7
SYNE1-204ENST00000367248 CTSFQ9UBX1 484 aa10.65□□□□□ -0.7
SYNE1-204ENST00000367248 PROCRQ9UNN8 238 aa10.65□□□□□ -0.7
SYNE1-204ENST00000367248 WNT11O96014 354 aa10.65□□□□□ -0.71
SYNE1-204ENST00000367248 H2AFB2P0C5Z0 115 aa10.65□□□□□ -0.71
SYNE1-204ENST00000367248 PPP5CP53041 499 aa10.65□□□□□ -0.71
SYNE1-204ENST00000367248 RBM45Q8IUH3 476 aaKnown RBP10.65□□□□□ -0.71
SYNE1-204ENST00000367248 FOXRED1Q96CU9 486 aaPredicted RBP10.65□□□□□ -0.71
SYNE1-204ENST00000367248 MYH15Q9Y2K3 1946 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 SCGB2A1O75556 95 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 IFNA7P01567 189 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms