RNA–Protein interactions for RNA: ENST00000361168.9

CLK2-202, Transcript of CDC like kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLK2, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-202ENST00000361168 HIF3AQ9Y2N7 669 aa15.9■□□□□ 0.14
CLK2-202ENST00000361168 RNF13O43567 381 aa15.89■□□□□ 0.13
CLK2-202ENST00000361168 TRAF3IP2O43734 574 aaPredicted RBP15.89■□□□□ 0.13
CLK2-202ENST00000361168 SS18L1O75177 396 aaPredicted RBP15.89■□□□□ 0.13
CLK2-202ENST00000361168 PTP4A3O75365 173 aa15.89■□□□□ 0.13
CLK2-202ENST00000361168 IGHV3-9P01782 118 aa15.89■□□□□ 0.13
CLK2-202ENST00000361168 HIST1H2ABP04908 130 aa15.89■□□□□ 0.13
CLK2-202ENST00000361168 YES1P07947 543 aa15.89■□□□□ 0.13
CLK2-202ENST00000361168 ZNF23P17027 643 aa15.89■□□□□ 0.13
CLK2-202ENST00000361168 HOXB6P17509 224 aaKnown RBP15.89■□□□□ 0.13
CLK2-202ENST00000361168 GSSP48637 474 aa15.89■□□□□ 0.13
CLK2-202ENST00000361168 LGALS3BPQ08380 585 aa15.89■□□□□ 0.13
CLK2-202ENST00000361168 RNPS1Q15287 305 aaKnown RBP15.89■□□□□ 0.13
CLK2-202ENST00000361168 RCN1Q15293 331 aa15.89■□□□□ 0.13
CLK2-202ENST00000361168 RIPPLY2Q5TAB7 128 aa15.89■□□□□ 0.13
CLK2-202ENST00000361168 EEF1A1P5Q5VTE0 462 aa15.89■□□□□ 0.13
CLK2-202ENST00000361168 SHQ1Q6PI26 577 aaKnown RBP15.89■□□□□ 0.13
CLK2-202ENST00000361168 CREB3L2Q70SY1 520 aa15.89■□□□□ 0.13
CLK2-202ENST00000361168 HIST3H2AQ7L7L0 130 aa15.89■□□□□ 0.13
CLK2-202ENST00000361168 MCEMP1Q8IX19 187 aa15.89■□□□□ 0.13
CLK2-202ENST00000361168 CDK20Q8IZL9 346 aa15.89■□□□□ 0.13
CLK2-202ENST00000361168 SCAIQ8N9R8 606 aa15.89■□□□□ 0.13
CLK2-202ENST00000361168 HIST1H2ACQ93077 130 aa15.89■□□□□ 0.13
CLK2-202ENST00000361168 BDH2Q9BUT1 245 aa15.89■□□□□ 0.13
CLK2-202ENST00000361168 EGLN3Q9H6Z9 239 aa15.89■□□□□ 0.13
CLK2-202ENST00000361168 SMURF2Q9HAU4 748 aa15.89■□□□□ 0.13
CLK2-202ENST00000361168 IGKV3D-15A0A087WSY6 115 aa15.88■□□□□ 0.13
CLK2-202ENST00000361168 MCIDASD6RGH6 385 aa15.88■□□□□ 0.13
CLK2-202ENST00000361168 SOX14O95416 240 aa15.88■□□□□ 0.13
CLK2-202ENST00000361168 FPR3P25089 353 aa15.88■□□□□ 0.13
CLK2-202ENST00000361168 SLC16A1P53985 500 aa15.88■□□□□ 0.13
CLK2-202ENST00000361168 MFSD13AQ14CX5 517 aa15.88■□□□□ 0.13
CLK2-202ENST00000361168 RELL2Q8NC24 303 aaPredicted RBP15.88■□□□□ 0.13
CLK2-202ENST00000361168 CIB1Q99828 191 aa15.88■□□□□ 0.13
CLK2-202ENST00000361168 PLA2G12AQ9BZM1 189 aa15.88■□□□□ 0.13
CLK2-202ENST00000361168 NKX1-2Q9UD57 310 aaPredicted RBP15.88■□□□□ 0.13
CLK2-202ENST00000361168 ADAM18Q9Y3Q7 739 aa15.88■□□□□ 0.13
CLK2-202ENST00000361168 DCHS2Q6V1P9 2916 aa15.88■□□□□ 0.13
CLK2-202ENST00000361168 UNC119BA6NIH7 251 aa15.88■□□□□ 0.13
CLK2-202ENST00000361168 G3V2T6 193 aa15.88■□□□□ 0.13
CLK2-202ENST00000361168 TP53P04637 393 aaPredicted RBP15.88■□□□□ 0.13
CLK2-202ENST00000361168 FCGR1AP12314 374 aa15.88■□□□□ 0.13
CLK2-202ENST00000361168 IFNGR1P15260 489 aa15.88■□□□□ 0.13
CLK2-202ENST00000361168 ZNF43P17038 809 aa15.88■□□□□ 0.13
CLK2-202ENST00000361168 SLC9A3P48764 834 aa15.88■□□□□ 0.13
CLK2-202ENST00000361168 SELENOPP49908 381 aa15.88■□□□□ 0.13
CLK2-202ENST00000361168 DAPP51397 102 aa15.88■□□□□ 0.13
CLK2-202ENST00000361168 MELKQ14680 651 aa15.88■□□□□ 0.13
CLK2-202ENST00000361168 ZBED5Q49AG3 693 aa15.88■□□□□ 0.13
CLK2-202ENST00000361168 TMEM211Q6ICI0 200 aa15.88■□□□□ 0.13
CLK2-202ENST00000361168 OR2A2Q6IF42 318 aa15.88■□□□□ 0.13
CLK2-202ENST00000361168 KLHL17Q6TDP4 642 aa15.88■□□□□ 0.13
CLK2-202ENST00000361168 STK32CQ86UX6 486 aa15.88■□□□□ 0.13
CLK2-202ENST00000361168 PQLC1Q8N2U9 271 aa15.88■□□□□ 0.13
CLK2-202ENST00000361168 LRRC75AQ8NAA5 344 aa15.88■□□□□ 0.13
CLK2-202ENST00000361168 OXGR1Q96P68 337 aa15.88■□□□□ 0.13
CLK2-202ENST00000361168 OPN3Q9H1Y3 402 aaPredicted RBP15.88■□□□□ 0.13
CLK2-202ENST00000361168 RASD1Q9Y272 281 aa15.88■□□□□ 0.13
CLK2-202ENST00000361168 TMEM5Q9Y2B1 443 aa15.88■□□□□ 0.13
CLK2-202ENST00000361168 OR6A2O95222 327 aa15.87■□□□□ 0.13
CLK2-202ENST00000361168 CGAP01215 116 aa15.87■□□□□ 0.13
CLK2-202ENST00000361168 CTSSP25774 331 aa15.87■□□□□ 0.13
CLK2-202ENST00000361168 RUNX1T1Q06455 604 aa15.87■□□□□ 0.13
CLK2-202ENST00000361168 TSPAN31Q12999 210 aa15.87■□□□□ 0.13
CLK2-202ENST00000361168 ALG10Q5BKT4 473 aa15.87■□□□□ 0.13
CLK2-202ENST00000361168 MRGPRGQ86SM5 289 aa15.87■□□□□ 0.13
CLK2-202ENST00000361168 LUZP2Q86TE4 346 aa15.87■□□□□ 0.13
CLK2-202ENST00000361168 ADPRHL1Q8NDY3 354 aa15.87■□□□□ 0.13
CLK2-202ENST00000361168 OR8D4Q8NGM9 314 aa15.87■□□□□ 0.13
CLK2-202ENST00000361168 OR5K1Q8NHB7 308 aa15.87■□□□□ 0.13
CLK2-202ENST00000361168 GNPDA2Q8TDQ7 276 aa15.87■□□□□ 0.13
CLK2-202ENST00000361168 ITLN2Q8WWU7 325 aaPredicted RBP15.87■□□□□ 0.13
CLK2-202ENST00000361168 CENPEQ02224 2701 aa15.87■□□□□ 0.13
CLK2-202ENST00000361168 NKX2-6A6NCS4 301 aa15.86■□□□□ 0.13
CLK2-202ENST00000361168 MITFO75030 526 aaPredicted RBP15.86■□□□□ 0.13
CLK2-202ENST00000361168 SMNDC1O75940 238 aaKnown RBP eCLIP15.86■□□□□ 0.135e-7■■■□□ 17.6
CLK2-202ENST00000361168 ANPEPP15144 967 aa15.86■□□□□ 0.13
CLK2-202ENST00000361168 CLDN17P56750 224 aa15.86■□□□□ 0.13
CLK2-202ENST00000361168 CLEC12AQ5QGZ9 265 aa15.86■□□□□ 0.13
CLK2-202ENST00000361168 TMEM201Q5SNT2 666 aa15.86■□□□□ 0.13
CLK2-202ENST00000361168 GTF2IRD2BQ6EKJ0 949 aa15.86■□□□□ 0.13
CLK2-202ENST00000361168 PXKQ7Z7A4 578 aa15.86■□□□□ 0.13
CLK2-202ENST00000361168 GTF2IRD2Q86UP8 949 aa15.86■□□□□ 0.13
CLK2-202ENST00000361168 ZDHHC13Q8IUH4 622 aa15.86■□□□□ 0.13
CLK2-202ENST00000361168 CLDN22Q8N7P3 220 aa15.86■□□□□ 0.13
CLK2-202ENST00000361168 SF3B5Q9BWJ5 86 aaKnown RBP15.86■□□□□ 0.13
CLK2-202ENST00000361168 PRSS50Q9UI38 385 aa15.86■□□□□ 0.13
CLK2-202ENST00000361168 NOSIPQ9Y314 301 aaKnown RBP15.86■□□□□ 0.13
CLK2-202ENST00000361168 NBPF19A0A087WUL8 3843 aa15.86■□□□□ 0.13
CLK2-202ENST00000361168 HSPB2A8KAH6 182 aa15.86■□□□□ 0.13
CLK2-202ENST00000361168 AGFG2O95081 481 aa15.86■□□□□ 0.13
CLK2-202ENST00000361168 VAMP5O95183 116 aa15.86■□□□□ 0.13
CLK2-202ENST00000361168 C1DQ13901 141 aaKnown RBP15.86■□□□□ 0.13
CLK2-202ENST00000361168 POU4F3Q15319 338 aa15.86■□□□□ 0.13
CLK2-202ENST00000361168 HSPB2Q16082 182 aa15.86■□□□□ 0.13
CLK2-202ENST00000361168 UEVLDQ8IX04 471 aa15.86■□□□□ 0.13
CLK2-202ENST00000361168 ZNF610Q8N9Z0 462 aa15.86■□□□□ 0.13
CLK2-202ENST00000361168 ATG16L2Q8NAA4 619 aa15.86■□□□□ 0.13
CLK2-202ENST00000361168 SAMD8Q96LT4 415 aa15.86■□□□□ 0.13
CLK2-202ENST00000361168 DGCR6LQ9BY27 220 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms