RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 DMWDQ09019 674 aa13.69□□□□□ -0.22
COL17A1-201ENST00000353479 ESPNLQ6ZVH7 1005 aa13.69□□□□□ -0.22
COL17A1-201ENST00000353479 ELMOD2Q8IZ81 293 aa13.69□□□□□ -0.22
COL17A1-201ENST00000353479 GDPD1Q8N9F7 314 aa13.69□□□□□ -0.22
COL17A1-201ENST00000353479 GAB3Q8WWW8 586 aa13.69□□□□□ -0.22
COL17A1-201ENST00000353479 ALG5Q9Y673 324 aa13.69□□□□□ -0.22
COL17A1-201ENST00000353479 CASP8AP2Q9UKL3 1982 aa13.69□□□□□ -0.22
COL17A1-201ENST00000353479 M0R082 166 aa13.69□□□□□ -0.22
COL17A1-201ENST00000353479 PIGAP37287 484 aa13.69□□□□□ -0.22
COL17A1-201ENST00000353479 NXPH1P58417 271 aa13.69□□□□□ -0.22
COL17A1-201ENST00000353479 DHRS13Q6UX07 377 aa13.69□□□□□ -0.22
COL17A1-201ENST00000353479 SGCZQ96LD1 299 aa13.69□□□□□ -0.22
COL17A1-201ENST00000353479 ACER3Q9NUN7 267 aa13.69□□□□□ -0.22
COL17A1-201ENST00000353479 ZNF44P15621 663 aa13.69□□□□□ -0.22
COL17A1-201ENST00000353479 PHC1P78364 1004 aa13.69□□□□□ -0.22
COL17A1-201ENST00000353479 NHSL2Q5HYW2 709 aa13.69□□□□□ -0.22
COL17A1-201ENST00000353479 ZNF547Q8IVP9 402 aa13.69□□□□□ -0.22
COL17A1-201ENST00000353479 MKXQ8IYA7 352 aa13.69□□□□□ -0.22
COL17A1-201ENST00000353479 LINC01555Q8NAE3 123 aa13.69□□□□□ -0.22
COL17A1-201ENST00000353479 OR1N1Q8NGS0 311 aa13.69□□□□□ -0.22
COL17A1-201ENST00000353479 FOXRED1Q96CU9 486 aaPredicted RBP13.69□□□□□ -0.22
COL17A1-201ENST00000353479 YARS2Q9Y2Z4 477 aaKnown RBP13.69□□□□□ -0.22
COL17A1-201ENST00000353479 CCDC187A0A096LP49 1063 aa13.69□□□□□ -0.22
COL17A1-201ENST00000353479 CREBL2O60519 120 aaPredicted RBP13.69□□□□□ -0.22
COL17A1-201ENST00000353479 HPGDSO60760 199 aa13.69□□□□□ -0.22
COL17A1-201ENST00000353479 PRPH2P23942 346 aa13.69□□□□□ -0.22
COL17A1-201ENST00000353479 HTR1FP30939 366 aa13.69□□□□□ -0.22
COL17A1-201ENST00000353479 MZT1Q08AG7 82 aa13.69□□□□□ -0.22
COL17A1-201ENST00000353479 FOXC1Q12948 553 aa13.69□□□□□ -0.22
COL17A1-201ENST00000353479 MTFR2Q6P444 385 aa13.69□□□□□ -0.22
COL17A1-201ENST00000353479 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.69□□□□□ -0.22
COL17A1-201ENST00000353479 HSD17B8Q92506 261 aa13.69□□□□□ -0.22
COL17A1-201ENST00000353479 MRI1Q9BV20 369 aa13.69□□□□□ -0.22
COL17A1-201ENST00000353479 RABL2AQ9UBK7 228 aaPredicted RBP13.69□□□□□ -0.22
COL17A1-201ENST00000353479 RABL2BQ9UNT1 228 aa13.69□□□□□ -0.22
COL17A1-201ENST00000353479 NCR1O76036 304 aa13.69□□□□□ -0.22
COL17A1-201ENST00000353479 TOXO94900 526 aa13.69□□□□□ -0.22
COL17A1-201ENST00000353479 KDM4DQ6B0I6 523 aa13.69□□□□□ -0.22
COL17A1-201ENST00000353479 TBC1D15Q8TC07 691 aa13.69□□□□□ -0.22
COL17A1-201ENST00000353479 TAAR9Q96RI9 348 aa13.69□□□□□ -0.22
COL17A1-201ENST00000353479 ZPBPQ9BS86 351 aa13.69□□□□□ -0.22
COL17A1-201ENST00000353479 EMC6Q9BV81 110 aa13.69□□□□□ -0.22
COL17A1-201ENST00000353479 MFRPQ9BY79 579 aa13.69□□□□□ -0.22
COL17A1-201ENST00000353479 KNG1P01042 644 aa13.68□□□□□ -0.22
COL17A1-201ENST00000353479 LSAMPQ13449 338 aa13.68□□□□□ -0.22
COL17A1-201ENST00000353479 NECAB3Q96P71 396 aaPredicted RBP13.68□□□□□ -0.22
COL17A1-201ENST00000353479 MENTQ9BUN1 341 aa13.68□□□□□ -0.22
COL17A1-201ENST00000353479 NGBQ9NPG2 151 aa13.68□□□□□ -0.22
COL17A1-201ENST00000353479 GPR160Q9UJ42 338 aa13.68□□□□□ -0.22
COL17A1-201ENST00000353479 TRIP11Q15643 1979 aa13.68□□□□□ -0.22
COL17A1-201ENST00000353479 IGHV5-51A0A0C4DH38 117 aa13.68□□□□□ -0.22
COL17A1-201ENST00000353479 TMEM221A6NGB7 291 aa13.68□□□□□ -0.22
COL17A1-201ENST00000353479 M0R296 226 aa13.68□□□□□ -0.22
COL17A1-201ENST00000353479 AKR1C2P52895 323 aa13.68□□□□□ -0.22
COL17A1-201ENST00000353479 MFAP5Q13361 173 aa13.68□□□□□ -0.22
COL17A1-201ENST00000353479 SLX4IPQ5VYV7 408 aa13.68□□□□□ -0.22
COL17A1-201ENST00000353479 ZNF454Q8N9F8 522 aa13.68□□□□□ -0.22
COL17A1-201ENST00000353479 MNTQ99583 582 aa13.68□□□□□ -0.22
COL17A1-201ENST00000353479 A0A087WUU8 490 aa13.68□□□□□ -0.22
COL17A1-201ENST00000353479 OR2A25A4D2G3 310 aa13.68□□□□□ -0.22
COL17A1-201ENST00000353479 ZFAND2BQ8WV99 257 aa13.68□□□□□ -0.22
COL17A1-201ENST00000353479 LRRC3BQ96PB8 259 aa13.68□□□□□ -0.22
COL17A1-201ENST00000353479 HINT2Q9BX68 163 aa13.68□□□□□ -0.22
COL17A1-201ENST00000353479 ZNF471Q9BX82 626 aaPredicted RBP13.68□□□□□ -0.22
COL17A1-201ENST00000353479 LAT2Q9GZY6 243 aa13.68□□□□□ -0.22
COL17A1-201ENST00000353479 C12orf4Q9NQ89 552 aa13.68□□□□□ -0.22
COL17A1-201ENST00000353479 B3GALT1Q9Y5Z6 326 aa13.68□□□□□ -0.22
COL17A1-201ENST00000353479 ZNF814B7Z6K7 855 aa13.68□□□□□ -0.22
COL17A1-201ENST00000353479 TRAPPC2LH3BP13 241 aa13.68□□□□□ -0.22
COL17A1-201ENST00000353479 STK17BO94768 372 aa13.68□□□□□ -0.22
COL17A1-201ENST00000353479 UQCRC1P31930 480 aa13.68□□□□□ -0.22
COL17A1-201ENST00000353479 CAV3P56539 151 aa13.68□□□□□ -0.22
COL17A1-201ENST00000353479 RPS25P62851 125 aaKnown RBP13.68□□□□□ -0.22
COL17A1-201ENST00000353479 GABREP78334 506 aa13.68□□□□□ -0.22
COL17A1-201ENST00000353479 ZMYND11Q15326 602 aa13.68□□□□□ -0.22
COL17A1-201ENST00000353479 ANKRD13BQ86YJ7 626 aa13.68□□□□□ -0.22
COL17A1-201ENST00000353479 OR13C9Q8NGT0 318 aa13.68□□□□□ -0.22
COL17A1-201ENST00000353479 COQ8AQ8NI60 647 aa13.68□□□□□ -0.22
COL17A1-201ENST00000353479 MICU1Q9BPX6 476 aa13.68□□□□□ -0.22
COL17A1-201ENST00000353479 CEPT1Q9Y6K0 416 aa13.68□□□□□ -0.22
COL17A1-201ENST00000353479 IGHV1OR21-1A0A087WYE8 117 aa13.67□□□□□ -0.22
COL17A1-201ENST00000353479 A0A1W2PNR3 127 aa13.67□□□□□ -0.22
COL17A1-201ENST00000353479 GPRIN2O60269 458 aa13.67□□□□□ -0.22
COL17A1-201ENST00000353479 CTSVO60911 334 aa13.67□□□□□ -0.22
COL17A1-201ENST00000353479 ABHD16AO95870 558 aa13.67□□□□□ -0.22
COL17A1-201ENST00000353479 RAB12Q6IQ22 244 aa13.67□□□□□ -0.22
COL17A1-201ENST00000353479 TCTN3Q6NUS6 607 aa13.67□□□□□ -0.22
COL17A1-201ENST00000353479 ARSKQ6UWY0 536 aa13.67□□□□□ -0.22
COL17A1-201ENST00000353479 COX15Q7KZN9 410 aa13.67□□□□□ -0.22
COL17A1-201ENST00000353479 CAMKMTQ7Z624 323 aa13.67□□□□□ -0.22
COL17A1-201ENST00000353479 GHSRQ92847 366 aa13.67□□□□□ -0.22
COL17A1-201ENST00000353479 COX14Q96I36 57 aa13.67□□□□□ -0.22
COL17A1-201ENST00000353479 OR11A1Q9GZK7 315 aa13.67□□□□□ -0.22
COL17A1-201ENST00000353479 PLAC1Q9HBJ0 212 aa13.67□□□□□ -0.22
COL17A1-201ENST00000353479 KLF13Q9Y2Y9 288 aaPredicted RBP13.67□□□□□ -0.22
COL17A1-201ENST00000353479 TMEM212A6NML5 194 aa13.67□□□□□ -0.22
COL17A1-201ENST00000353479 P2RX6O15547 441 aa13.67□□□□□ -0.22
COL17A1-201ENST00000353479 LYRM1O43325 122 aa13.67□□□□□ -0.22
COL17A1-201ENST00000353479 SELENOFO60613 162 aa13.67□□□□□ -0.22
COL17A1-201ENST00000353479 RAB3DO95716 219 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms