RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 C7orf34Q96L11 122 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 CDCA4Q9BXL8 241 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 TAS2R8Q9NYW2 309 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 B3GNT3Q9Y2A9 372 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 HIF3AQ9Y2N7 669 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 CDC14CA4D256 554 aa11.17□□□□□ -0.62
SMAD9-201ENST00000350148 CSN2P05814 226 aa11.17□□□□□ -0.62
SMAD9-201ENST00000350148 GDF1P27539 372 aa11.17□□□□□ -0.62
SMAD9-201ENST00000350148 ASB18Q6ZVZ8 466 aa11.17□□□□□ -0.62
SMAD9-201ENST00000350148 SLC46A3Q7Z3Q1 461 aa11.17□□□□□ -0.62
SMAD9-201ENST00000350148 PDZD9Q8IXQ8 264 aa11.17□□□□□ -0.62
SMAD9-201ENST00000350148 RCBTB1Q8NDN9 531 aa11.17□□□□□ -0.62
SMAD9-201ENST00000350148 KATNB1Q9BVA0 655 aa11.17□□□□□ -0.62
SMAD9-201ENST00000350148 B3GNT4Q9C0J1 378 aa11.17□□□□□ -0.62
SMAD9-201ENST00000350148 ACTR6Q9GZN1 396 aa11.17□□□□□ -0.62
SMAD9-201ENST00000350148 DUSP21Q9H596 190 aa11.17□□□□□ -0.62
SMAD9-201ENST00000350148 ZNF223Q9UK11 482 aaPredicted RBP11.17□□□□□ -0.62
SMAD9-201ENST00000350148 LOXL2Q9Y4K0 774 aa11.17□□□□□ -0.62
SMAD9-201ENST00000350148 PLXNA3P51805 1871 aa11.17□□□□□ -0.62
SMAD9-201ENST00000350148 H3BML4 177 aa11.17□□□□□ -0.62
SMAD9-201ENST00000350148 IMPA2O14732 288 aa11.17□□□□□ -0.62
SMAD9-201ENST00000350148 VAMP5O95183 116 aa11.17□□□□□ -0.62
SMAD9-201ENST00000350148 RAB5CP51148 216 aa11.17□□□□□ -0.62
SMAD9-201ENST00000350148 SLC35A2P78381 396 aa11.17□□□□□ -0.62
SMAD9-201ENST00000350148 BTG2P78543 158 aa11.17□□□□□ -0.62
SMAD9-201ENST00000350148 RAB11BQ15907 218 aa11.17□□□□□ -0.62
SMAD9-201ENST00000350148 C1orf140Q5VVS0 124 aa11.17□□□□□ -0.62
SMAD9-201ENST00000350148 CARD17Q5XLA6 110 aa11.17□□□□□ -0.62
SMAD9-201ENST00000350148 LRFN4Q6PJG9 635 aa11.17□□□□□ -0.62
SMAD9-201ENST00000350148 STK35Q8TDR2 534 aa11.17□□□□□ -0.62
SMAD9-201ENST00000350148 ATOH1Q92858 354 aaPredicted RBP11.17□□□□□ -0.62
SMAD9-201ENST00000350148 C12orf10Q9HB07 376 aa11.17□□□□□ -0.62
SMAD9-201ENST00000350148 COLQQ9Y215 455 aaPredicted RBP11.17□□□□□ -0.62
SMAD9-201ENST00000350148 PRSS23O95084 383 aa11.17□□□□□ -0.62
SMAD9-201ENST00000350148 TGM6O95932 706 aa11.17□□□□□ -0.62
SMAD9-201ENST00000350148 TBXA2RP21731 343 aa11.17□□□□□ -0.62
SMAD9-201ENST00000350148 POLR2IP36954 125 aaKnown RBP11.17□□□□□ -0.62
SMAD9-201ENST00000350148 FGL1Q08830 312 aa11.17□□□□□ -0.62
SMAD9-201ENST00000350148 GPR50Q13585 617 aa11.17□□□□□ -0.62
SMAD9-201ENST00000350148 ARFRP1Q13795 201 aa11.17□□□□□ -0.62
SMAD9-201ENST00000350148 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.17□□□□□ -0.62
SMAD9-201ENST00000350148 GAB4Q2WGN9 574 aa11.17□□□□□ -0.62
SMAD9-201ENST00000350148 ABRACLQ9P1F3 81 aa11.17□□□□□ -0.62
SMAD9-201ENST00000350148 CDHR4A6H8M9 788 aa11.17□□□□□ -0.62
SMAD9-201ENST00000350148 ITGA5P08648 1049 aa11.17□□□□□ -0.62
SMAD9-201ENST00000350148 TCN2P20062 427 aa11.17□□□□□ -0.62
SMAD9-201ENST00000350148 MESP2Q0VG99 397 aa11.17□□□□□ -0.62
SMAD9-201ENST00000350148 PRICKLE4Q2TBC4 344 aa11.17□□□□□ -0.62
SMAD9-201ENST00000350148 ETFRF1Q6IPR1 90 aa11.17□□□□□ -0.62
SMAD9-201ENST00000350148 METAP1DQ6UB28 335 aaPredicted RBP11.17□□□□□ -0.62
SMAD9-201ENST00000350148 CCBE1Q6UXH8 406 aaPredicted RBP11.17□□□□□ -0.62
SMAD9-201ENST00000350148 D2HGDHQ8N465 521 aa11.17□□□□□ -0.62
SMAD9-201ENST00000350148 TMEM178AQ8NBL3 297 aa11.17□□□□□ -0.62
SMAD9-201ENST00000350148 SGCZQ96LD1 299 aa11.17□□□□□ -0.62
SMAD9-201ENST00000350148 RGCCQ9H4X1 137 aa11.17□□□□□ -0.62
SMAD9-201ENST00000350148 RLIMQ9NVW2 624 aa11.17□□□□□ -0.62
SMAD9-201ENST00000350148 TEX13CA0A0J9YWL9 993 aa11.16□□□□□ -0.62
SMAD9-201ENST00000350148 SLC43A1O75387 559 aa11.16□□□□□ -0.62
SMAD9-201ENST00000350148 GLCEO94923 617 aa11.16□□□□□ -0.62
SMAD9-201ENST00000350148 GABARAPO95166 117 aa11.16□□□□□ -0.62
SMAD9-201ENST00000350148 DPP4P27487 766 aa11.16□□□□□ -0.62
SMAD9-201ENST00000350148 SFTPDP35247 375 aa11.16□□□□□ -0.62
SMAD9-201ENST00000350148 SOX2P48431 317 aa11.16□□□□□ -0.62
SMAD9-201ENST00000350148 ART1P52961 327 aa11.16□□□□□ -0.62
SMAD9-201ENST00000350148 CD300LDQ6UXZ3 194 aa11.16□□□□□ -0.62
SMAD9-201ENST00000350148 PLCZ1Q86YW0 608 aa11.16□□□□□ -0.62
SMAD9-201ENST00000350148 FAM83FQ8NEG4 500 aaPredicted RBP11.16□□□□□ -0.62
SMAD9-201ENST00000350148 TERB2Q8NHR7 220 aa11.16□□□□□ -0.62
SMAD9-201ENST00000350148 SNIP1Q8TAD8 396 aaKnown RBP11.16□□□□□ -0.62
SMAD9-201ENST00000350148 SETD6Q8TBK2 473 aa11.16□□□□□ -0.62
SMAD9-201ENST00000350148 HYLS1Q96M11 299 aa11.16□□□□□ -0.62
SMAD9-201ENST00000350148 CMC2Q9NRP2 79 aa11.16□□□□□ -0.62
SMAD9-201ENST00000350148 M0R296 226 aa11.16□□□□□ -0.62
SMAD9-201ENST00000350148 AIPO00170 330 aa11.16□□□□□ -0.62
SMAD9-201ENST00000350148 C21orf33P30042 268 aaPredicted RBP11.16□□□□□ -0.62
SMAD9-201ENST00000350148 DBPQ10586 325 aaPredicted RBP11.16□□□□□ -0.62
SMAD9-201ENST00000350148 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.16□□□□□ -0.62
SMAD9-201ENST00000350148 ADAMTS14Q8WXS8 1223 aa11.16□□□□□ -0.62
SMAD9-201ENST00000350148 NEURL2Q9BR09 285 aa11.16□□□□□ -0.62
SMAD9-201ENST00000350148 ZNF649Q9BS31 505 aa11.16□□□□□ -0.62
SMAD9-201ENST00000350148 WWTR1Q9GZV5 400 aa11.16□□□□□ -0.62
SMAD9-201ENST00000350148 SLC6A13Q9NSD5 602 aa11.16□□□□□ -0.62
SMAD9-201ENST00000350148 SIRT3Q9NTG7 399 aaPredicted RBP11.16□□□□□ -0.62
SMAD9-201ENST00000350148 PCDHGA5Q9Y5G8 931 aa11.16□□□□□ -0.62
SMAD9-201ENST00000350148 ANKRD34BA5PLL1 514 aa11.16□□□□□ -0.62
SMAD9-201ENST00000350148 RFPL3O75679 317 aa11.16□□□□□ -0.62
SMAD9-201ENST00000350148 ZXDAP98168 799 aa11.16□□□□□ -0.62
SMAD9-201ENST00000350148 BDH1Q02338 343 aa11.16□□□□□ -0.62
SMAD9-201ENST00000350148 ZMYND11Q15326 602 aa11.16□□□□□ -0.62
SMAD9-201ENST00000350148 MARCH3Q86UD3 253 aa11.16□□□□□ -0.62
SMAD9-201ENST00000350148 NKAIN4Q8IVV8 208 aa11.16□□□□□ -0.62
SMAD9-201ENST00000350148 PIAS4Q8N2W9 510 aaPredicted RBP11.16□□□□□ -0.62
SMAD9-201ENST00000350148 SGCDQ92629 289 aa11.16□□□□□ -0.62
SMAD9-201ENST00000350148 LOXL4Q96JB6 756 aa11.16□□□□□ -0.62
SMAD9-201ENST00000350148 WDR77Q9BQA1 342 aaPredicted RBP11.16□□□□□ -0.62
SMAD9-201ENST00000350148 ARRDC1-AS1Q9H2J1 176 aa11.16□□□□□ -0.62
SMAD9-201ENST00000350148 WDR76Q9H967 626 aa11.16□□□□□ -0.62
SMAD9-201ENST00000350148 CPNE5Q9HCH3 593 aa11.16□□□□□ -0.62
SMAD9-201ENST00000350148 SLC16A7O60669 478 aa11.16□□□□□ -0.62
SMAD9-201ENST00000350148 MPLP40238 635 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms