RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 CSAG2Q9Y5P2 127 aa13.21□□□□□ -0.3
CBX3-201ENST00000337620 MS4A18H0YCH9 400 aa13.2□□□□□ -0.3
CBX3-201ENST00000337620 GYPBP06028 91 aa13.2□□□□□ -0.3
CBX3-201ENST00000337620 APEHP13798 732 aaKnown RBP13.2□□□□□ -0.3
CBX3-201ENST00000337620 HTR1FP30939 366 aa13.2□□□□□ -0.3
CBX3-201ENST00000337620 DIO1P49895 249 aa13.2□□□□□ -0.3
CBX3-201ENST00000337620 TNFSF10P50591 281 aa13.2□□□□□ -0.3
CBX3-201ENST00000337620 MS4A18Q3C1V0 323 aa13.2□□□□□ -0.3
CBX3-201ENST00000337620 GTF2IRD2BQ6EKJ0 949 aa13.2□□□□□ -0.3
CBX3-201ENST00000337620 LEG1Q6P5S2 330 aa13.2□□□□□ -0.3
CBX3-201ENST00000337620 TMPPEQ6ZT21 453 aa13.2□□□□□ -0.3
CBX3-201ENST00000337620 MEPCEQ7L2J0 689 aaKnown RBP13.2□□□□□ -0.3
CBX3-201ENST00000337620 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.2□□□□□ -0.3
CBX3-201ENST00000337620 GTF2IRD2Q86UP8 949 aa13.2□□□□□ -0.3
CBX3-201ENST00000337620 TMEM99Q8N816 258 aa13.2□□□□□ -0.3
CBX3-201ENST00000337620 NPEPL1Q8NDH3 523 aa13.2□□□□□ -0.3
CBX3-201ENST00000337620 LGALS12Q96DT0 336 aa13.2□□□□□ -0.3
CBX3-201ENST00000337620 MRPS18CQ9Y3D5 142 aaKnown RBP13.2□□□□□ -0.3
CBX3-201ENST00000337620 PCDHGB1Q9Y5G3 927 aa13.2□□□□□ -0.3
CBX3-201ENST00000337620 CEP295Q9C0D2 2601 aa13.2□□□□□ -0.3
CBX3-201ENST00000337620 IMPA2O14732 288 aa13.19□□□□□ -0.3
CBX3-201ENST00000337620 ADRA2AP08913 450 aa13.19□□□□□ -0.3
CBX3-201ENST00000337620 HLA-DOBP13765 273 aa13.19□□□□□ -0.3
CBX3-201ENST00000337620 ATP6V1E1P36543 226 aa13.19□□□□□ -0.3
CBX3-201ENST00000337620 CDKN2AP42771 156 aaKnown RBP13.19□□□□□ -0.3
CBX3-201ENST00000337620 RAB39AQ14964 217 aa13.19□□□□□ -0.3
CBX3-201ENST00000337620 ACKR1Q16570 336 aa13.19□□□□□ -0.3
CBX3-201ENST00000337620 SHFQ7M4L6 423 aa13.19□□□□□ -0.3
CBX3-201ENST00000337620 GPR141Q7Z602 305 aa13.19□□□□□ -0.3
CBX3-201ENST00000337620 OR52I1Q8NGK6 324 aa13.19□□□□□ -0.3
CBX3-201ENST00000337620 ZPLD1Q8TCW7 415 aa13.19□□□□□ -0.3
CBX3-201ENST00000337620 FAR1Q8WVX9 515 aa13.19□□□□□ -0.3
CBX3-201ENST00000337620 OR2B2Q9GZK3 357 aa13.19□□□□□ -0.3
CBX3-201ENST00000337620 ZNF703Q9H7S9 590 aaPredicted RBP13.19□□□□□ -0.3
CBX3-201ENST00000337620 ACOT13Q9NPJ3 140 aa13.19□□□□□ -0.3
CBX3-201ENST00000337620 TAS2R16Q9NYV7 291 aa13.19□□□□□ -0.3
CBX3-201ENST00000337620 B3GALT5Q9Y2C3 310 aa13.19□□□□□ -0.3
CBX3-201ENST00000337620 A0A1W2PRG6 482 aa13.19□□□□□ -0.3
CBX3-201ENST00000337620 OR6C68A6NDL8 312 aa13.19□□□□□ -0.3
CBX3-201ENST00000337620 M0R3G1 203 aa13.19□□□□□ -0.3
CBX3-201ENST00000337620 INMTO95050 263 aa13.19□□□□□ -0.3
CBX3-201ENST00000337620 TXNDC12O95881 172 aa13.19□□□□□ -0.3
CBX3-201ENST00000337620 JUNBP17275 347 aaPredicted RBP13.19□□□□□ -0.3
CBX3-201ENST00000337620 MAGEA5P43359 124 aa13.19□□□□□ -0.3
CBX3-201ENST00000337620 GTF2A1P52655 376 aaPredicted RBP13.19□□□□□ -0.3
CBX3-201ENST00000337620 RAB40BQ12829 278 aa13.19□□□□□ -0.3
CBX3-201ENST00000337620 KRR1Q13601 381 aaKnown RBP13.19□□□□□ -0.3
CBX3-201ENST00000337620 EMC4Q5J8M3 183 aa13.19□□□□□ -0.3
CBX3-201ENST00000337620 GPR139Q6DWJ6 353 aa13.19□□□□□ -0.3
CBX3-201ENST00000337620 TMEM178AQ8NBL3 297 aa13.19□□□□□ -0.3
CBX3-201ENST00000337620 RORBQ92753 470 aa13.19□□□□□ -0.3
CBX3-201ENST00000337620 MIB2Q96AX9 1013 aa13.19□□□□□ -0.3
CBX3-201ENST00000337620 SCMH1Q96GD3 660 aa13.19□□□□□ -0.3
CBX3-201ENST00000337620 TEAD3Q99594 435 aa13.19□□□□□ -0.3
CBX3-201ENST00000337620 TRAPPC4Q9Y296 219 aa13.19□□□□□ -0.3
CBX3-201ENST00000337620 GJE1A6NN92 205 aa13.18□□□□□ -0.3
CBX3-201ENST00000337620 H7C1C5 153 aa13.18□□□□□ -0.3
CBX3-201ENST00000337620 XKRYO14609 159 aa13.18□□□□□ -0.3
CBX3-201ENST00000337620 ARHGEF9O43307 516 aa13.18□□□□□ -0.3
CBX3-201ENST00000337620 CEACAM4O75871 244 aa13.18□□□□□ -0.3
CBX3-201ENST00000337620 RAB36O95755 333 aa13.18□□□□□ -0.3
CBX3-201ENST00000337620 CELA3AP09093 270 aa13.18□□□□□ -0.3
CBX3-201ENST00000337620 ACVR1BP36896 505 aa13.18□□□□□ -0.3
CBX3-201ENST00000337620 RPL27P61353 136 aaKnown RBP13.18□□□□□ -0.3
CBX3-201ENST00000337620 LCN6P62502 163 aa13.18□□□□□ -0.3
CBX3-201ENST00000337620 SLC35A1P78382 337 aa13.18□□□□□ -0.3
CBX3-201ENST00000337620 ZP4Q12836 540 aa13.18□□□□□ -0.3
CBX3-201ENST00000337620 MESTQ5EB52 335 aa13.18□□□□□ -0.3
CBX3-201ENST00000337620 IGFL2Q6UWQ7 119 aa13.18□□□□□ -0.3
CBX3-201ENST00000337620 SPACA3Q8IXA5 215 aa13.18□□□□□ -0.3
CBX3-201ENST00000337620 TMEM251Q8N6I4 163 aa13.18□□□□□ -0.3
CBX3-201ENST00000337620 ARIH2OSQ8N7S6 290 aa13.18□□□□□ -0.3
CBX3-201ENST00000337620 OR4F15Q8NGB8 312 aa13.18□□□□□ -0.3
CBX3-201ENST00000337620 OR51L1Q8NGJ5 315 aa13.18□□□□□ -0.3
CBX3-201ENST00000337620 KLHL15Q96M94 604 aa13.18□□□□□ -0.3
CBX3-201ENST00000337620 DCBLD2Q96PD2 775 aa13.18□□□□□ -0.3
CBX3-201ENST00000337620 TXNIPQ9H3M7 391 aa13.18□□□□□ -0.3
CBX3-201ENST00000337620 MRPS18AQ9NVS2 196 aaKnown RBP13.18□□□□□ -0.3
CBX3-201ENST00000337620 DMXL2Q8TDJ6 3036 aa13.18□□□□□ -0.3
CBX3-201ENST00000337620 A0A0J9YW62 118 aa13.18□□□□□ -0.3
CBX3-201ENST00000337620 IRGMA1A4Y4 181 aa13.18□□□□□ -0.3
CBX3-201ENST00000337620 CCDC160A6NGH7 325 aa13.18□□□□□ -0.3
CBX3-201ENST00000337620 SLC22A31A6NKX4 558 aa13.18□□□□□ -0.3
CBX3-201ENST00000337620 ZNF99A8MXY4 864 aaPredicted RBP13.18□□□□□ -0.3
CBX3-201ENST00000337620 H0YC42 278 aa13.18□□□□□ -0.3
CBX3-201ENST00000337620 TNFSF11O14788 317 aa13.18□□□□□ -0.3
CBX3-201ENST00000337620 SEC14L5O43304 696 aa13.18□□□□□ -0.3
CBX3-201ENST00000337620 PMS2P2O95744 297 aa13.18□□□□□ -0.3
CBX3-201ENST00000337620 HPNP05981 417 aa13.18□□□□□ -0.3
CBX3-201ENST00000337620 LCKP06239 509 aa13.18□□□□□ -0.3
CBX3-201ENST00000337620 STARP49675 285 aa13.18□□□□□ -0.3
CBX3-201ENST00000337620 CLDN20P56880 219 aa13.18□□□□□ -0.3
CBX3-201ENST00000337620 PPIAP62937 165 aaKnown RBP13.18□□□□□ -0.3
CBX3-201ENST00000337620 POU3F1Q03052 451 aaPredicted RBP13.18□□□□□ -0.3
CBX3-201ENST00000337620 MELKQ14680 651 aa13.18□□□□□ -0.3
CBX3-201ENST00000337620 FOXB2Q5VYV0 432 aa13.18□□□□□ -0.3
CBX3-201ENST00000337620 TMEM225Q6GV28 225 aa13.18□□□□□ -0.3
CBX3-201ENST00000337620 UBQLNLQ8IYU4 475 aa13.18□□□□□ -0.3
CBX3-201ENST00000337620 OR51G2Q8NGK0 314 aa13.18□□□□□ -0.3
CBX3-201ENST00000337620 MUL1Q969V5 352 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms